mRNA_E-fasciculatus_F_contig14873.3470.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14873.3470.1
Unique NamemRNA_E-fasciculatus_F_contig14873.3470.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 518 bits (1333), Expect = 1.090e-174
Identity = 261/298 (87.58%), Postives = 273/298 (91.61%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLREL--GGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAVS 903
            RDPV VVLRKS DPDR DATETARGE A+YQGITVE+LS KWQETVD LER  +TVTNAKNALEGAL IREFDG LIR+EKF+FLDVVWLA+ILKPLLNHKDQETFDGLVSLGDTGD RITLDDPSD+ASWGRLKS GVLEPRLAY IWPN LSEYVLP LAFLGLTFPLE DPAKGLVVLLRL+P+RPESVG  IDTFCL+HTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGL E+  G RGIFAVVLEYSSTDNEL AQIFGDISTPAPW+ LSYV SAVS
Sbjct:  445 RDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVS 742
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 4.190e-161
Identity = 244/296 (82.43%), Postives = 261/296 (88.18%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAVS 903
            RDPV VVLRKS  PDR DATETA G   VYQGITVE+LS KWQ+ VDELERR I VTNAKNALEGALSIREFDG L+RHE FVFLDV+WLARILKPLLNHKDQETFDG V+LGDTGD RITLDDP  +ASWGRLK+ GVLEPRLAY +WP  LSEYVLPTLA LGLTFPLEGD  +G VVLLRL+PERP+SVG+VIDTFC  HTPALSASW IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGL +LGGRGIFAVVLEYSSTD++L  QIFGDI TPAPW+ALSYV SAVS
Sbjct:  395 RDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVS 690
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 473 bits (1217), Expect = 1.640e-159
Identity = 239/295 (81.02%), Postives = 253/295 (85.76%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAV 900
            +DPV VV+ KS DPD  DA ETA G   VYQGITVEELSTKWQETVDELERR ITVTNAKNALEG+LS+REFDG L+RHEKFVFLDVVWLARILKPLLNHKDQETFDG V+LGDTGD  ITLDDPSD+ SW RLK  GVLEPRLAY +WP+ LSEYVLPTLA LG TFPLE DP +GLVVLLRL P RPESVG+VIDTFC   TPA SASWKIFLGVPPGA+EKVLTRCCGLG VRTFWRYGVLVHG      GR  FAVVLEYSSTDNELTA+IFGDISTPA W+ALSYV SAV
Sbjct:  141 KDPVEVVVHKSPDPDGEDAAETAEGTTDVYQGITVEELSTKWQETVDELERRGITVTNAKNALEGSLSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDIKSWDRLKKEGVLEPRLAYAMWPDGLSEYVLPTLASLGFTFPLENDPDEGLVVLLRLTPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAV 435
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 7.230e-159
Identity = 240/295 (81.36%), Postives = 254/295 (86.10%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAV 900
            RDPV VVL KS DPDR +AT+TA G+  VYQGITVEEL TKWQ TVDELERR ITVTNAKNALEGALSIREFDG L+R +KFVFLDVVWLARILKPLLNHKDQE FDG V+LGDTGD RITLDDP D+ASW RLK  GVLEPRLAY +WP+ LSEYVLPTLA LGLTFPLE DPA+GLVVLLRL+P RP SVG+VI+TFC   TPA SASWKIFLGVPPGAIEKVLTRCCGLG VRTFWRYGVLVHGGL    GR  FAVVLEYSS  NELTAQIFG ISTPA W+ALSYV SAV
Sbjct:  107 RDPVEVVLHKSLDPDRGNATKTAEGKTDVYQGITVEELGTKWQGTVDELERRGITVTNAKNALEGALSIREFDGSLVRRDKFVFLDVVWLARILKPLLNHKDQENFDGCVNLGDTGDARITLDDPLDIASWDRLKREGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLKPTRPGSVGKVIETFCSGLTPAFSASWKIFLGVPPGAIEKVLTRCCGLGRVRTFWRYGVLVHGGLGVQDGRSTFAVVLEYSSAGNELTAQIFGGISTPAAWVALSYVMSAV 401
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 7.830e-158
Identity = 240/295 (81.36%), Postives = 254/295 (86.10%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAV 900
            RDPV  VL KS DPD  DA ETA G+  VYQGITVEEL TKWQETVDELERR ITVTNAKNALEGALS+REFDG L+R E FVFLDVVWLARILKPLLNHKDQETFDG V+LGDTGD  ITLDDPSD+ SW RLK  GVLEP+LAY +WP+ LSEYVLPTLA LGLTFPLE DP +GLVVLLRL+P RPESVG+VIDTFC   TPA SASWKIFLGVPPGA+EKVLTRCCGLGGVRTFWRYGVLVHG L    GR  FAVVLEYSSTDNELTA+IFGDISTPA W+ALSYV SAV
Sbjct:  280 RDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAV 574
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 1.320e-157
Identity = 244/296 (82.43%), Postives = 260/296 (87.84%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAVS 903
            RDPV VVLRKS +PDR D TET  G+  VYQGITVEEL TKWQETVDELERR ITVTN  NALEGALSIREFDG L+RHEKFVFLDVVWL+RILKPLLNHKDQ TFDG V LGDTGD RITL D SD+ SW RLKS GVLEPRLA  +WP+ LSEYVLPTL  +GLTFPLEGDP  GLVVLLRL+P RPESVG+VIDTFC +HTPA SASW+IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGL +L GRGIFAVV+EYSSTDNELTAQIFGDISTPAPW+ALSYV SAVS
Sbjct:  660 RDPVEVVLRKSPEPDRGDETETG-GKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVS 954
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BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 468 bits (1204), Expect = 7.220e-155
Identity = 237/296 (80.07%), Postives = 258/296 (87.16%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAVS 903
            RDPV +VL KS D +RR  TET  G+  VYQ I VEEL T W+ETVDEL +R I VTNA+NALEGALSIREFDG L+RHEKFVFLDVVWLARILKPLLNHKDQ TFDG V+LGDTGD RITLDD SD+ASWGRLK+ GVLEPRLAY +WP+ LSEYVLPTLA LGLTFPLEGDP  GLVVLLRL+P RP SVG+ IDTFC ++TPA SASW+IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGL +L GRGIFAVV EYSST+NELTAQIFGDIST APW+ALSYVTSAVS
Sbjct:  376 RDPVEMVLLKSPDSERRP-TETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVS 670
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 5.400e-151
Identity = 231/296 (78.04%), Postives = 249/296 (84.12%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAVS 903
            R PV +V+ KS D D   ATETA G   VYQGITVEELS +WQ TVDEL RR ITVTNA+NALEGALSIREFDG L+ HEKFVFLDVVWLARILKPLLNHKDQE FDG V+LGDTGD RITLDDPSD+ASW RLK+ GVLEPRLA  IWP+ LSEYVLPTLA LGL FPLE DPA+GLVVLLRL+P RPESVG+VIDTFC   TPA  ASWK+FLGVPPGA+EKVLTRCC LGGV+TFWRYGVLVHGGL     R  FAVV+EYSSTDNEL AQ+FGDIS P PWMA+SYV SAVS
Sbjct:  425 RHPVEMVMLKSPDSDS-GATETAGGTTTVYQGITVEELSARWQGTVDELGRRGITVTNAENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGEVIDTFCSGLTPAFRASWKVFLGVPPGAVEKVLTRCCALGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELVAQVFGDISRPGPWMAMSYVMSAVS 719
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 5.760e-150
Identity = 230/295 (77.97%), Postives = 251/295 (85.08%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAV 900
            RDPV VV+   A+PDR DAT TA  +  VYQGITVE L  KWQE V  L RR + VTNAKNALEGALSIREFDG L+RHE FVFLDVVWLARILKPLLNHKD+ETFDGLV+LGDTGD R+TL+DP D+ASWGRLK+ GVLEPRLA  +WPN LS+YVLPTLA LGLTFPL+ DPA GLVVLLRL P+RPE VG+VIDTFCL+ TPA S SWKIFLGVP GAIEKVLTRCC LGGV+TFWR GVLVHGGL +  G  IFAVVLEYSS+DNELTAQIFGDISTPAPW+ALSYV SAV
Sbjct:  489 RDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAV 783
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 1.150e-146
Identity = 236/296 (79.73%), Postives = 250/296 (84.46%), Query Frame = 1 
Query:   16 RDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQETVDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILKPLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLAYVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQVIDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAVS 903
            RDPV +V+ KS D DR  ATETA+    VYQGITVEELS KWQETVD L RR ITVTNA+NALEGALSIREFDG L+ HEKFVFLDVVWLARILKPLLNHKDQE FDG V+LGDTGD RITLDD +D+ASW RLK  GVLEPRLAY IWPN LSEYVLPTLA LGL FPLE DPA+GLVVLLRL+P RPESVG+VIDTFC   TPA  ASWKIFLGVPPGAIEKVLTRCCGLGGV+TFWRYGVLVHGGL     R  FAVV+EYSSTDNEL AQIFGD+STP PW A SYV SAVS
Sbjct:  596 RDPVEMVILKSPDSDR-GATETAK--TTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVS 888
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14873.3470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSZ8_9PHAE1.090e-17487.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI4.190e-16182.43LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5K516_9PHAE1.640e-15981.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0H4_9PHAE7.230e-15981.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1K4_9PHAE7.830e-15881.36Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI1.320e-15782.43LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI7.220e-15580.07LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5L650_9PHAE5.400e-15178.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC9_ECTSI5.760e-15077.97LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI1.150e-14679.73LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14873contigE-fasciculatus_F_contig14873:2006..3180 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score495.4
Seed ortholog evalue1.9e-137
Seed eggNOG ortholog2880.D7G431
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size903
Cds size903
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927968.4915075-CDS-E-fasciculatus_F_contig14873:2005..22291622927968.4915075-CDS-E-fasciculatus_F_contig14873:2005..2229Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14873 2006..2229 +
1695995771.6276739-CDS-E-fasciculatus_F_contig14873:2005..22291695995771.6276739-CDS-E-fasciculatus_F_contig14873:2005..2229Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14873 2006..2229 +
1622927968.5066698-CDS-E-fasciculatus_F_contig14873:2501..31801622927968.5066698-CDS-E-fasciculatus_F_contig14873:2501..3180Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14873 2502..3180 +
1695995771.639339-CDS-E-fasciculatus_F_contig14873:2501..31801695995771.639339-CDS-E-fasciculatus_F_contig14873:2501..3180Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14873 2502..3180 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14873.3470.1prot_E-fasciculatus_F_contig14873.3470.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14873 2006..3180 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14873.3470.1

>prot_E-fasciculatus_F_contig14873.3470.1 ID=prot_E-fasciculatus_F_contig14873.3470.1|Name=mRNA_E-fasciculatus_F_contig14873.3470.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=301bp
MRYLPRDPVGVVLRKSADPDRRDATETARGEIAVYQGITVEELSTKWQET
VDELERREITVTNAKNALEGALSIREFDGYLIRHEKFVFLDVVWLARILK
PLLNHKDQETFDGLVSLGDTGDVRITLDDPSDMASWGRLKSHGVLEPRLA
YVIWPNRLSEYVLPTLAFLGLTFPLEGDPAKGLVVLLRLQPERPESVGQV
IDTFCLEHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLV
HGGLRELGGRGIFAVVLEYSSTDNELTAQIFGDISTPAPWMALSYVTSAV
S
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mRNA from alignment at E-fasciculatus_F_contig14873:2006..3180+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14873.3470.1 ID=mRNA_E-fasciculatus_F_contig14873.3470.1|Name=mRNA_E-fasciculatus_F_contig14873.3470.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1175bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14873:2006..3180+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGTTATTTGCCCAGGGATCCCGTGGGGGTGGTACTGCGCAAGTCGGC
CGACCCCGACAGAAGAGACGCGACGGAAACGGCAAGAGGCGAGATAGCCG
TGTATCAGGGGATTACGGTCGAGGAACTCAGCACCAAATGGCAGGAAACA
GTTGACGAGCTTGAGAGGAGAGAGATCACGGTGACGAACGCCAAGAATGC
GTTGGAGGGAGCGCTCTCAATCAGGTAAGTTACAGATTGGCATTCCGACA
ATAGTACCACCGTTTTCGCTACGTTGGGGCGCACCGGAAACCGTACGTAC
ATAATCTCTGGCAGTCGGTACTGTGCATCGCTTGGCGAACAAGAAGAGCG
GTGGCTTTCAGTATGGTGTCGGCCTCGTTTCGGAGGACACTTGCGTAGCA
ATGCCGCTGCCTCAACCCTCCGAAAGATTTGTGATCTCATCTTGTGTGGA
TCATTTTAAAACTCACCCTTTTGACTTCCCAATGTTGTGCATGCAGGGAG
TTCGACGGATACCTCATTCGCCACGAGAAGTTTGTCTTTCTGGACGTCGT
TTGGCTGGCAAGAATCCTTAAACCATTGCTCAACCACAAGGATCAAGAGA
CCTTTGACGGGCTCGTGAGTCTTGGGGACACGGGTGACGTGCGCATCACA
CTCGACGATCCATCAGACATGGCTTCGTGGGGTCGACTCAAGAGCCACGG
CGTGCTTGAACCCAGGTTGGCGTATGTCATCTGGCCCAACCGTCTGTCCG
AGTACGTTCTCCCTACTCTGGCATTCTTGGGTCTCACTTTTCCGCTGGAA
GGCGATCCTGCTAAGGGCCTGGTAGTTCTGCTGAGGCTACAGCCAGAGCG
CCCCGAGAGTGTGGGCCAAGTGATCGACACATTCTGCTTGGAGCACACCC
CGGCACTCAGCGCCAGTTGGAAGATTTTCCTCGGTGTACCGCCTGGTGCG
ATTGAAAAGGTGTTGACACGGTGCTGCGGTCTTGGTGGTGTGCGAACGTT
CTGGCGATACGGGGTTCTTGTGCACGGTGGCCTCAGGGAACTAGGTGGGC
GTGGGATTTTTGCTGTGGTCTTGGAATACTCTTCCACCGACAATGAGCTT
ACCGCTCAGATTTTCGGCGATATCAGCACGCCGGCTCCGTGGATGGCGCT
GTCATACGTCACGTCTGCCGTGAGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14873:2006..3180+

>mRNA_E-fasciculatus_F_contig14873.3470.1 ID=mRNA_E-fasciculatus_F_contig14873.3470.1|Name=mRNA_E-fasciculatus_F_contig14873.3470.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1806bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14873:2006..3180+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGTTATTTGCCCAGGGATCCCGTGGGGGTGGTACTGCGCAAGTCGGC
CGACCCCGACAGAAGAGACGCGACGGAAACGGCAAGAGGCGAGATAGCCG
TGTATCAGGGGATTACGGTCGAGGAACTCAGCACCAAATGGCAGGAAACA
GTTGACGAGCTTGAGAGGAGAGAGATCACGGTGACGAACGCCAAGAATGC
GTTGGAGGGAGCGCTCTCAATCAGATGCGTTATTTGCCCAGGGATCCCGT
GGGGGTGGTACTGCGCAAGTCGGCCGACCCCGACAGAAGAGACGCGACGG
AAACGGCAAGAGGCGAGATAGCCGTGTATCAGGGGATTACGGTCGAGGAA
CTCAGCACCAAATGGCAGGAAACAGTTGACGAGCTTGAGAGGAGAGAGAT
CACGGTGACGAACGCCAAGAATGCGTTGGAGGGAGCGCTCTCAATCAGGG
AGTTCGACGGATACCTCATTCGCCACGAGAAGTTTGTCTTTCTGGACGTC
GTTTGGCTGGCAAGAATCCTTAAACCATTGCTCAACCACAAGGATCAAGA
GACCTTTGACGGGCTCGTGAGTCTTGGGGACACGGGTGACGTGCGCATCA
CACTCGACGATCCATCAGACATGGCTTCGTGGGGTCGACTCAAGAGCCAC
GGCGTGCTTGAACCCAGGTTGGCGTATGTCATCTGGCCCAACCGTCTGTC
CGAGTACGTTCTCCCTACTCTGGCATTCTTGGGTCTCACTTTTCCGCTGG
AAGGCGATCCTGCTAAGGGCCTGGTAGTTCTGCTGAGGCTACAGCCAGAG
CGCCCCGAGAGTGTGGGCCAAGTGATCGACACATTCTGCTTGGAGCACAC
CCCGGCACTCAGCGCCAGTTGGAAGATTTTCCTCGGTGTACCGCCTGGTG
CGATTGAAAAGGTGTTGACACGGTGCTGCGGTCTTGGTGGTGTGCGAACG
TTCTGGCGATACGGGGTTCTTGTGCACGGTGGCCTCAGGGAACTAGGTGG
GCGTGGGATTTTTGCTGTGGTCTTGGAATACTCTTCCACCGACAATGAGC
TTACCGCTCAGATTTTCGGCGATATCAGCACGCCGGCTCCGTGGATGGCG
CTGTCATACGTCACGTCTGCCGTGAGCGGAGTTCGACGGATACCTCATTC
GCCACGAGAAGTTTGTCTTTCTGGACGTCGTTTGGCTGGCAAGAATCCTT
AAACCATTGCTCAACCACAAGGATCAAGAGACCTTTGACGGGCTCGTGAG
TCTTGGGGACACGGGTGACGTGCGCATCACACTCGACGATCCATCAGACA
TGGCTTCGTGGGGTCGACTCAAGAGCCACGGCGTGCTTGAACCCAGGTTG
GCGTATGTCATCTGGCCCAACCGTCTGTCCGAGTACGTTCTCCCTACTCT
GGCATTCTTGGGTCTCACTTTTCCGCTGGAAGGCGATCCTGCTAAGGGCC
TGGTAGTTCTGCTGAGGCTACAGCCAGAGCGCCCCGAGAGTGTGGGCCAA
GTGATCGACACATTCTGCTTGGAGCACACCCCGGCACTCAGCGCCAGTTG
GAAGATTTTCCTCGGTGTACCGCCTGGTGCGATTGAAAAGGTGTTGACAC
GGTGCTGCGGTCTTGGTGGTGTGCGAACGTTCTGGCGATACGGGGTTCTT
GTGCACGGTGGCCTCAGGGAACTAGGTGGGCGTGGGATTTTTGCTGTGGT
CTTGGAATACTCTTCCACCGACAATGAGCTTACCGCTCAGATTTTCGGCG
ATATCAGCACGCCGGCTCCGTGGATGGCGCTGTCATACGTCACGTCTGCC
GTGAGC
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