mRNA_E-fasciculatus_F_contig1483.3446.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Match: A0A6H5J7K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K4_9PHAE) HSP 1 Score: 960 bits (2482), Expect = 0.000e+0 Identity = 543/680 (79.85%), Postives = 566/680 (83.24%), Query Frame = 1
Query: 1 QVLSSEKDWKAKSRVVGHIYVTLVSGMLVYMVGYALVQVVRERRQFQCVTADQDAEDAPQTCYGMETTSDAFRVLTGFCFFALAAGVAGYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWRLPDIPLKGSEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVAKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYYAYSSSSWLSTEQSPRATSGSREPSHFKNVPAARYNAQGGGGSYPSSVHSSRENLSQSGGXXXXXXXXXXXXXXXGYGFYAYGSGSAATPGRVSSVGSSLGGMAFVASPSSCSLESHDRQSRRGPLSWLLGWRTSAPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SPFLWQASMDCGSSSYNKGS---RPENVTKMHNDGVGGGMGAAVSRWWRRVVEGKREGSAPDRAGESASLWQSTDDDAPDAWYPGFGELSRAEVTYSLRGYRGPATRQERAVSDDGSLGGG-------VLEGYRGGAGPVRQTRRWEEASVEAAEHDRRQTLAPPRRETVVRQDYGSSGGDGGPGKPAHIVDRPGHTDDLGDGSFSEGRGGHGPRYPGQGEHDSSHRGAEELENWQGGTVRTEVARGGAQVVGGAPVAGERIGEGMYRPYYVP 2007
+VLSSEKDWKAKSR VG +YVTLVSGMLVYMVGYALVQVVRE RQFQCVTADQD++DAPQTCY M+TTSDAFRVLTGFCFFALAAGVA YGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLW LPDIPLKGSED+CLLNF VFMLWDY+PTVWLLLVMEGTTGEHVGTSV KAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQY SSSSWLSTEQSPR T G R+P+HFKNVPAA YNAQGGGGSYPSSVHSSRENLSQSG XXXXXXXXXXXXXX AAT G+VSSVGSSLGGMAFVASPSSCSLESHDRQ+RRGP SWLLGWR SA AE XXXXXXXXX SPFLWQASMDCGSSSY KGS R EN +M GGGMG VSRWWRRV+EG+REGSAPD+A E+ASLWQS+D DAPD W PGFGELSRAEV YSLRGYRGPATRQERA+SDD SLGGG V +GYR GPVRQTRR EEASV+ AEH RQ LAP RRETVVRQDYGSSG DGG GKPA DRP T D+GDG+FSEGRGGH PRYPG EH SHRG EELENWQGGTVRTEVARGGAQVV G GER GE MYRPY+VP
Sbjct: 42 KVLSSEKDWKAKSRFVGRVYVTLVSGMLVYMVGYALVQVVRESRQFQCVTADQDSKDAPQTCYSMDTTSDAFRVLTGFCFFALAAGVASYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWCLPDIPLKGSEDICLLNFSVFMLWDYVPTVWLLLVMEGTTGEHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYI--SSSSWLSTEQSPRTTCGLRDPNHFKNVPAAPYNAQGGGGSYPSSVHSSRENLSQSGVGXXXXXXXXXXXXXX-----XXXXXXAATAGQVSSVGSSLGGMAFVASPSSCSLESHDRQNRRGPFSWLLGWRRSATAEAEAGSGAVRGVSDGRARGHHRSGXXXXXXXXXXSPFLWQASMDCGSSSYIKGSSSSRRENENEMSKTSDGGGMGKTVSRWWRRVLEGRREGSAPDQAEETASLWQSSDADAPDKWSPGFGELSRAEVMYSLRGYRGPATRQERAISDDSSLGGGGAGGMGGVWQGYRSETGPVRQTRRREEASVKTAEHKGRQILAPLRRETVVRQDYGSSGVDGGLGKPARSDDRPAQTVDVGDGTFSEGRGGHDPRYPG--EHGRSHRGGEELENWQGGTVRTEVARGGAQVVRGGLAGGERTGERMYRPYHVP 712
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Match: D7FSN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN3_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 5.380e-162 Identity = 243/266 (91.35%), Postives = 255/266 (95.86%), Query Frame = 1
Query: 1 QVLSSEKDWKAKSRVVGHIYVTLVSGMLVYMVGYALVQVVRERRQFQCVTADQDAEDAPQTCYGMETTSDAFRVLTGFCFFALAAGVAGYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWRLPDIPLKGSEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVAKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYYAYSSSSWLSTEQSPRATSGSREPSHFKNVP 798
+VLSSE DWKAKSRVVG +YVTLVSGMLVYMVGYALVQVVRE RQFQCVTAD+D++DAPQTCY M+TTSDAFRVLTGFCFFALAAGVA YGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLW LPDIPLKGSEDVCLLNFCVFMLWDY+PTVWLLLVMEGTTG+HVGTSV KAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQY++YSS WLSTEQSPR TSG R+P+HFKNVP
Sbjct: 97 KVLSSENDWKAKSRVVGRVYVTLVSGMLVYMVGYALVQVVRESRQFQCVTADKDSKDAPQTCYSMDTTSDAFRVLTGFCFFALAAGVASYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWCLPDIPLKGSEDVCLLNFCVFMLWDYIPTVWLLLVMEGTTGDHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYFSYSS--WLSTEQSPRTTSGLRDPNHFKNVP 360
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Match: A0A835ZDS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS8_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.660e-43 Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 1
Query: 1 QVLSSEKDWKAKSRVVGHIYVTLVSGMLVYMVGYALVQVVRERRQFQCVTADQDAEDAPQTCYGMETTSDAFRVLTGFCFFALAAGVAGYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWRLPDIPLKGSEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSV----------AKAVHPANYGDDL-RNLPDYGVFREIKAAAARDAA 663
QV+S+ + W + R + +Y+ + + M+V+M A++ V E +++C++ ED+ + CY ++ FRV+T FCFFALA VA YG +M+RL SQ+R LIY PRAL LN L +VFLSKG YQ+ S +W LP+IPL+G ED+ LNF VF WDYLPTV LLLV+ A+++ ++ L + LPDYG+FREIK A R A
Sbjct: 97 QVVSTRRKWATQWRYIRPVYIAITTSMVVFMAITAIISAVEEHLEYKCLS-----EDSKRDCYHPPYQAEGFRVVTTFCFFALAVIVAAYGIQMARLQESQHRRFLIYEPRALAILNSVLFSVFLSKGIYQLCSTLNIWYLPNIPLQGDEDISPLNFIVFCWWDYLPTVLLLLVVTNRXXXXXXXXXXXXXXXXXXXARSLLATSHAKRLPQALPDYGLFREIKIEAMRTGA 323
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Match: A0A6G0WR97_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WR97_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.000e-6 Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 1
Query: 238 FFALAAGVAGYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWRLPDI--PL-KGSEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVAKAVHPANYGDDLRNLPDYGVFREIKAAAARDAAR 666
FF L+ A +G+K++ + +++ R LI PR+L N L +F ++ + + + W L + P+ + E L+F +F++WD+ PTV LLLV+ T VG S ++ + R LPDYG+F I A + +R
Sbjct: 174 FFVLSFLFAFFGWKLAHVDSTKLRRLLISKPRSLAMFNAMLFLIFFTRSLRDLLTSQN-WLLFSVANPMDQYGEITSFLSFSLFVVWDFFPTV-LLLVLISTKAGGVGVS-----RKTSFRGEGR-LPDYGIFHVINAGCVSETSR 311
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Match: A0A485L4P6_9STRA (Aste57867_15867 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4P6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.060e-6 Identity = 49/185 (26.49%), Postives = 88/185 (47.57%), Query Frame = 1
Query: 136 FQCVTADQDAEDAPQTCYGMETTSDAFRV--------LTGFCFFALAAGVAGYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWRLPDI--PLKGSEDVCLLN-FCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVAKAVHPANYGDDLRNLPDYGVFREIKAAAARD 657
F + ++ EDA + YG + D F++ + FF L+ A +G+KM+ + + + R LI PR+L N L +F ++ + + W L + P+ + L+ F +F++WD+LPT+ LLL++ G G V + ++ + + LPD+G+F I RD
Sbjct: 143 FWALNSNSSLEDAYK--YGDQYDQDMFKISAVRVQLEYSAVSFFVLSFLFAFFGWKMANVESWKRRRLLISKPRSLAVFNSILFLIFFTRSLRDFLTSQN-WLLFSVLNPVDQFGQITTLSTFALFVVWDFLPTILLLLLISTKAG---GVGVPRNT---SFRGEAK-LPDFGIFHVINTGCVRD 317
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Match: A0A067CCZ2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCZ2_SAPPC) HSP 1 Score: 60.1 bits (144), Expect = 1.260e-5 Identity = 62/250 (24.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query: 148 TADQDAEDAPQTCYGMETTSDAFRV--------LTGFCFFALAAGVAGYGFKMSRLTASQNRAQLIYHPRALTALNCFLVAVFLSKGAYQISSVKGLWRLPDI-PLKGSEDVCLLN-FCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVAKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYY-AYSSSSWLSTEQSPRATSGS---REPSHFKNVPAARYNAQGGGGSYPSSVHS 855
T++ EDA + YG + + +++ + FF L+ A +G+K++ + S LI PR++ N L +F ++ +++ + R + P+ + + F +F++WD+LPTV LLL++ G VG H R LPD+G+F+ IK + +E + AS + Y A ++ ++ +Q R T G ++P RY++ G G+ P+ V+S
Sbjct: 139 TSNSSLEDAFK--YGDQYDQEMYKISAVKTQLEYSSISFFLLSFLFAFFGWKLAHVRDSTRHRLLISKPRSVAIFNSLLFVIFFTRSMRDLATSQNWLRFSVLNPVDQFGQITSFSYFILFVVWDFLPTVLLLLLVSTEAGG-VGPPRHNKAHD-------RQLPDFGIFQVIKTGHVAERVTSETSHLAASPKREYGARTTPINVADQQKSRWTRGGDLFQDP--------LRYDSDDGNGATPTYVNS 370 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1483.3446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1483.3446.1 >prot_E-fasciculatus_F_contig1483.3446.1 ID=prot_E-fasciculatus_F_contig1483.3446.1|Name=mRNA_E-fasciculatus_F_contig1483.3446.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=645bp MLVYMVGYALVQVVRERRQFQCVTADQDAEDAPQTCYGMETTSDAFRVLTback to top mRNA from alignment at E-fasciculatus_F_contig1483:10282..17153- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1483.3446.1 ID=mRNA_E-fasciculatus_F_contig1483.3446.1|Name=mRNA_E-fasciculatus_F_contig1483.3446.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6872bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1483:10282..17153- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1483:10282..17153- >mRNA_E-fasciculatus_F_contig1483.3446.1 ID=mRNA_E-fasciculatus_F_contig1483.3446.1|Name=mRNA_E-fasciculatus_F_contig1483.3446.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3870bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1483:10282..17153- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |