mRNA_E-fasciculatus_F_contig14807.3433.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: D7G8M6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M6_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 5.370e-136 Identity = 214/240 (89.17%), Postives = 219/240 (91.25%), Query Frame = 1
Query: 64 GEPKRGATRNARGSTGALGRRRKKGDGAKADQRLFDWQAVRYGLVKGVSEAVILVSRQQYRWIGATAPRSPVAAXXXXXXXXXXXKRREEGATCPVLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLRVAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDDNEDVGC 783
G P +GA RNARGS GALGRRRK+GDGAKADQRLFDWQAVRYGL KGVSEAVILVSRQQYRWIG TAPRSPV A XXXXXXXXXX TCPVLLWKDGRDVMAVDVGTGDKA LVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLR AFKVSGS+E+ SEGGAPSTDMHWHAHPVRCM+VAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVL ID EDVGC
Sbjct: 216 GGPNKGAMRNARGSKGALGRRRKRGDGAKADQRLFDWQAVRYGLAKGVSEAVILVSRQQYRWIGTTAPRSPVPAAXXXXXXXXXXXXXXX-TTCPVLLWKDGRDVMAVDVGTGDKAALVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLRAAFKVSGSREVFSEGGAPSTDMHWHAHPVRCMSVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLHIDCREDVGC 454
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A6H5KD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE) HSP 1 Score: 387 bits (993), Expect = 6.850e-123 Identity = 201/245 (82.04%), Postives = 211/245 (86.12%), Query Frame = 1
Query: 43 KAAGGASGEPKRGATRNARGSTGALGRRRKKGDGAKADQRLFDWQAVRYGLVKGVSEAVILVSRQQYRWIGATAPRSPVAAXXXXXXXXXXXKRREEGAT-CPVLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLRVAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDDNED 774
K AGGASGEP +GA RNARGS GAL RRRK+ DGAKADQRLFDWQAVRYGL KG+SEAVILVSRQQYRWIGATAPRSPV KRR G T CPVLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGE+L+T HLDGSMSQWHELTDRLR AFKV GS+E+LSE G PSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQ L + ++
Sbjct: 250 KEAGGASGEPNKGAMRNARGSKGALSRRRKRSDGAKADQRLFDWQAVRYGLAKGISEAVILVSRQQYRWIGATAPRSPVPPAAEGGGDA---KRRGWGTTTCPVLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGESLITAHLDGSMSQWHELTDRLRAAFKVLGSREVLSEAGPPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQGLAVSPGQE 491
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A835Z938_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z938_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 7.100e-20 Identity = 62/149 (41.61%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 325 REEGATCPVLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLRVAFKVSGSQE--LLSEGGAP-STDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKG------TKAFLPRLGAPL 744
R G GR + D TG + + PV ++ G + TGH DGSM+ W L A +SG+ E GG P ST +HWHAH V C+A +PDG L+SGGEE VLVQWNL +G + FLPRLGAPL
Sbjct: 402 RSSGRRWTAATLNKGRALQITDAVTGARHTMPAGQWPVTAVTASCSG-AVATGHKDGSMTVWRGLGTAAEEAI-LSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPL 548
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A7S0WFQ5_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WFQ5_9CHLO) HSP 1 Score: 89.7 bits (221), Expect = 1.270e-16 Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 394 GTGDKAVLVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLR-VAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDDNED 774
G +A+ + + +L D ETL G G + +H ++ + + G + ++ PST HWH+ V C+ + DG LFSGGEEAVLV WNL G K +LPRLGAPL+ + + ED
Sbjct: 226 GNASRALKMHRTKDITALAFSHDDETLAVGDSTGRIVMFHGFARAVKNLQNEAQGEKTEVNGDALPSTTSHWHSRAVGCLHFSGDGAHLFSGGEEAVLVIWNLQDGKKTYLPRLGAPLKSI-VSQRED 352
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A096P9M2_OSTTA (Quinonprotein alcohol dehydrogenase-like superfamily n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P9M2_OSTTA) HSP 1 Score: 89.4 bits (220), Expect = 1.700e-16 Identity = 48/133 (36.09%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 349 VLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLR-VAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPL 744
+ +W G+D G +A+ + + +L D E L G G + +H +R + + G + + PST HWH+ V C+ + DG LFSGGEEAVLV WNL G K +LPRLGAPL
Sbjct: 197 ISIWGVGKDG-----GGSSRALRIHHTKAITALAFSRDDEILACGDSSGRIVMFHGFARAVRKLQQEARGEETEVDRDALPSTTSHWHSRAVGCLHFSADGAHLFSGGEEAVLVIWNLKDGKKTYLPRLGAPL 324
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A2V0PIF7_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PIF7_9CHLO) HSP 1 Score: 88.2 bits (217), Expect = 4.230e-16 Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 472 LVTGHLDGSMSQWHELTDRLRVAFKVSG-SQELLSEGGAPS-TDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPL 744
L G + G + WH R +A G S GGAP+ T +HWHAHPV C+A +PDG L SGG E+VLVQW L+ G + +LPRLG PL
Sbjct: 187 LAAGDVSGRIMLWHNF--RAALASGEGGKSNSAGGRGGAPACTTLHWHAHPVGCLAFSPDGNHLLSGGAESVLVQWQLATGKRNYLPRLGGPL 277
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A316U3W0_9BASI (WD40 repeat-like protein (Fragment) n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U3W0_9BASI) HSP 1 Score: 86.3 bits (212), Expect = 2.020e-15 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 1
Query: 469 TLVTGHLDGSMSQWHELTDRLRVAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDDNED 774
+ TG G + W+ L ++ ++ SQ+ +E APST +HWHAH V +A P+G L SGGEEAVLV W LS ++ ++PRLGAP+ + I D D
Sbjct: 321 SFATGDAVGKIRIWYCLDEKY-----IAQSQQAGAEKHAPSTLLHWHAHAVESLAYTPNGAYLLSGGEEAVLVLWQLSSKSREYVPRLGAPINSIAIADGTD 417
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A316UPE4_9BASI (Uncharacterized protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UPE4_9BASI) HSP 1 Score: 84.7 bits (208), Expect = 6.600e-15 Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 1
Query: 430 APVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLRVAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDD 765
A + SL T TG G + W L + F +E E APST +HWHAH V ++ P+G + SGGEEAVLV W LS G + ++PRLGAP+ + I D
Sbjct: 222 ADLMSLAFHPSEPTFATGDAVGKIRVWRCLDED----FLRQAQEETEGEKHAPSTVLHWHAHAVSALSFTPNGAYIVSGGEEAVLVLWQLSTGQREYVPRLGAPIDAVTIAD 329
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A5C3QC93_9AGAR (WD40-repeat-containing domain protein n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QC93_9AGAR) HSP 1 Score: 84.0 bits (206), Expect = 1.200e-14 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 460 DGETLVTGHLDGSMSQWHELTDRLRVAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDDNED 774
D E TG G + W+ L L +A +V+G + A +T MHWHAH V + P+G L SGGEEAVLV W L G K F+PR+GAP+ + + +D
Sbjct: 281 DEEYFATGDEKGQIRLWYCLNGDLAMASQVTGVGKK-----AQTTRMHWHAHAVSSLVFTPNGAYLLSGGEEAVLVIWQLHTGKKEFVPRVGAPISTVSLSRAQD 380
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Match: A0A0C3BNS4_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3BNS4_9AGAM) HSP 1 Score: 83.6 bits (205), Expect = 1.630e-14 Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 472 LVTGHLDGSMSQWHELTDRLRVAFKVSGSQELLSEGGAPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQVLDIDDNED 774
L TG G + W+ L D + +F+ +G + AP+T +HWHAH V+ + P+G L SGGEE+VLV W L G K F+PR+GAP+ + + D D
Sbjct: 274 LATGDETGQIRLWYCLKDDM--SFERAGEDKT-----APTTTLHWHAHAVQAIEFTPNGAYLLSGGEESVLVIWQLHTGRKEFVPRVGAPIHTISVCDTGD 367 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14807.3433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14807.3433.1 >prot_E-fasciculatus_F_contig14807.3433.1 ID=prot_E-fasciculatus_F_contig14807.3433.1|Name=mRNA_E-fasciculatus_F_contig14807.3433.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=262bp GDTTQSLRRGGGRAKAAGGASGEPKRGATRNARGSTGALGRRRKKGDGAKback to top mRNA from alignment at E-fasciculatus_F_contig14807:507..3212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14807.3433.1 ID=mRNA_E-fasciculatus_F_contig14807.3433.1|Name=mRNA_E-fasciculatus_F_contig14807.3433.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2706bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14807:507..3212- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14807:507..3212- >mRNA_E-fasciculatus_F_contig14807.3433.1 ID=mRNA_E-fasciculatus_F_contig14807.3433.1|Name=mRNA_E-fasciculatus_F_contig14807.3433.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14807:507..3212- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |