mRNA_E-fasciculatus_F_contig14760.3402.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A6H5LBI9_9PHAE (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBI9_9PHAE) HSP 1 Score: 405 bits (1042), Expect = 6.360e-137 Identity = 208/277 (75.09%), Postives = 214/277 (77.26%), Query Frame = 1
Query: 1 QMELEDGQSGPGNPTFTVSATVNGLSVELPAEMRKPGWFAVPPAPHKVADTGWQKGCAVSFTIGALGGQHASLRGGHTPRTFQGVKMRSLRSAAAFGGDGNREGRGA--------------------------------------------------------GEGDWTTEWMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
QMELEDGQSGPGNPTFTVSATVNGLSVELPAEMRKPGWFAVPPAPHKVADTGWQKGC VSFTIG+LGGQHASLRGGHTPR+FQGVKM SLR AAAFGG+GNREGRGA EGDWTTEWMK YA ALANLKLSEMSLPGTHDSGTAKM+NPVVSPWA TQNLGVL+QLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDK+RTSLSLRKALECVKGFVQAHP
Sbjct: 67 QMELEDGQSGPGNPTFTVSATVNGLSVELPAEMRKPGWFAVPPAPHKVADTGWQKGCVVSFTIGSLGGQHASLRGGHTPRSFQGVKMASLRGAAAFGGNGNREGRGALIPKRQSSARGNGXXXXXVEGFFGGIGRHLQAVTESAGGLLNDCGIGAPARPAGGKAEGDWTTEWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWAKTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHP 343
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A7V0MFE4_9DELT (1-phosphatidylinositol phosphodiesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V0MFE4_9DELT) HSP 1 Score: 95.9 bits (237), Expect = 2.630e-19 Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 343 EWMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHPR 666
+WM+ Y P + +L L++++L +HDSGT + +P SPWA+ Q+L + QL GVRVLDLR GY G ++ D +VHD +RT ++L+ ALE VK F+ + R
Sbjct: 232 KWMETYGPVIGHLPLNKLTLVCSHDSGTYDLVSPFASPWASCQDLNIHDQLNQGVRVLDLRVGYQGDKSG-----DDRFILVHDTWRTKVTLKNALEQVKDFLSRNTR 334
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A0E3JNI5_CLOSL (1-phosphatidylinositol phosphodiesterase n=2 Tax=Clostridium TaxID=1485 RepID=A0A0E3JNI5_CLOSL) HSP 1 Score: 85.5 bits (210), Expect = 1.110e-15 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 322 GEGDWTTEWMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHPR 666
G+ + WM+ Y + N L +++L TH+SGT M +P SPW QNL + QL GVRVLDLR G E N +VHD +R+ +SL AL+ V+GF+ +P+
Sbjct: 212 GDSAYLKNWMETYGSVIKNTPLDDLTLVCTHNSGTYNMVSPFGSPWTKCQNLSISDQLNKGVRVLDLRVG----EDNGN------FILVHDTWRSEISLEDALKQVQGFIARNPK 316
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: UPI00106A8DB1 (uncharacterized protein LOC114520878 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A8DB1) HSP 1 Score: 80.5 bits (197), Expect = 5.350e-14 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 343 EWMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFV 651
+WM Y+ L L L+EM+LPGTHDSGT + + + W TQ+L + QL+ GVR LDLR G + D V +VHDK+RTS +L AL+ + F+
Sbjct: 165 KWMSYYSDVLGKLTLTEMTLPGTHDSGTHDPKSSLGALWIKTQSLSLGQQLQFGVRALDLRIG----QNSPGDYV-----IVHDKWRTSYTLAAALKEITDFI 258
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: UPI001422D57D (phosphatidylinositol-specific phospholipase C n=1 Tax=Chryseobacterium sp. Tr-659 TaxID=2608340 RepID=UPI001422D57D) HSP 1 Score: 72.4 bits (176), Expect = 2.160e-11 Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 346 WMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
WM A N+ LS++S+PGTHDSG A+++ PVVS A TQNL + QL AGVR LD+RC ++ + + H +L+ L F+Q+HP
Sbjct: 55 WM---ANLQDNISLSKISIPGTHDSG-ARVDAPVVSGTAKTQNLSIAEQLNAGVRFLDIRCRHI----------DNAFTIHHGAIYQNLNFDDVLNACYAFLQSHP 146
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A3N0W313_9FLAO (1-phosphatidylinositol phosphodiesterase n=4 Tax=Chryseobacterium TaxID=59732 RepID=A0A3N0W313_9FLAO) HSP 1 Score: 70.1 bits (170), Expect = 1.450e-10 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 346 WMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
WM N+ +S++S+PGTHDSG A+++ PVVS A TQNL + QL AGVR LD+RC ++ + + H +L+ L F+ +HP
Sbjct: 60 WMSGIQD---NISISKISIPGTHDSG-ARIDAPVVSGTAKTQNLSIAEQLNAGVRFLDIRCRHI----------DNSFTIHHGSIYQNLNFDDVLNACYAFLNSHP 151
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: UPI001E313E3C (phosphatidylinositol-specific phospholipase C n=1 Tax=Chryseobacterium sp. c4a TaxID=1573582 RepID=UPI001E313E3C) HSP 1 Score: 69.7 bits (169), Expect = 1.980e-10 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 346 WMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
WM A N+ +S++S+PGTHDSG A+++ PVVS A TQ+L + QL AGVR LD+RC ++ + + H +L+ L F+Q+HP
Sbjct: 60 WM---AGLQDNISISKISIPGTHDSG-ARIDAPVVSGTAKTQDLSIAEQLNAGVRFLDIRCRHI----------DNSFTIHHGAIYQNLNFDDVLNACYAFLQSHP 151
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A3G6RZA0_9FLAO (1-phosphatidylinositol phosphodiesterase n=2 Tax=Chryseobacterium lactis TaxID=1241981 RepID=A0A3G6RZA0_9FLAO) HSP 1 Score: 69.3 bits (168), Expect = 2.630e-10 Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 346 WMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
WM A N+ +S++S+PGTHDSG A+++ PVVS A TQNL + QL AGVR LD+RC ++ + + H +L+ L F+ +HP
Sbjct: 55 WM---AGLQDNISISKISIPGTHDSG-ARIDAPVVSGTAKTQNLSIAEQLNAGVRFLDIRCRHI----------DNSFTIHHGAIYQNLNFDDVLTACYAFLNSHP 146
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A0G3M874_9FLAO (1-phosphatidylinositol phosphodiesterase n=4 Tax=Chryseobacterium TaxID=59732 RepID=A0A0G3M874_9FLAO) HSP 1 Score: 69.3 bits (168), Expect = 2.630e-10 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 346 WMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
WM N+ +S++S+PGTHDSG A+++ PVVS A TQNL + QL AGVR LD+RC ++ + + H +L+ L F+ +HP
Sbjct: 55 WMSGLQD---NISISKISIPGTHDSG-ARIDAPVVSGTAKTQNLSIAEQLDAGVRFLDIRCRHI----------DNSFTIHHGAIYQNLNFDDVLNACYAFLNSHP 146
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Match: A0A3D3MPR3_9FLAO (1-phosphatidylinositol phosphodiesterase n=2 Tax=Chryseobacterium TaxID=59732 RepID=A0A3D3MPR3_9FLAO) HSP 1 Score: 69.3 bits (168), Expect = 2.640e-10 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 346 WMKAYAPALANLKLSEMSLPGTHDSGTAKMNNPVVSPWATTQNLGVLSQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKYRTSLSLRKALECVKGFVQAHP 663
WM N+ +S++S+PGTHDSG A+++ PVVS A TQ+L + QL AGVR LD+RC ++ + + H +L+ L F+++HP
Sbjct: 56 WMSGLQD---NISISKISIPGTHDSG-ARVDAPVVSGTAKTQDLSIAEQLNAGVRFLDIRCRHI----------DNSFTIHHGAIYQNLNFEDVLSACYAFLESHP 147 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14760.3402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14760.3402.1 >prot_E-fasciculatus_F_contig14760.3402.1 ID=prot_E-fasciculatus_F_contig14760.3402.1|Name=mRNA_E-fasciculatus_F_contig14760.3402.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=222bp MELEDGQSGPGNPTFTVSATVNGLSVELPAEMRKPGWFAVPPAPHKVADTback to top mRNA from alignment at E-fasciculatus_F_contig14760:418..2758- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14760.3402.1 ID=mRNA_E-fasciculatus_F_contig14760.3402.1|Name=mRNA_E-fasciculatus_F_contig14760.3402.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2341bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14760:418..2758- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14760:418..2758- >mRNA_E-fasciculatus_F_contig14760.3402.1 ID=mRNA_E-fasciculatus_F_contig14760.3402.1|Name=mRNA_E-fasciculatus_F_contig14760.3402.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1332bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14760:418..2758- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |