mRNA_E-fasciculatus_F_contig14675.3352.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: D8LQF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF5_ECTSI) HSP 1 Score: 125 bits (315), Expect = 7.150e-35 Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQTVA 201
+SIKMVTKQSP GSFDLYITRFLDE GNTLLSAMLHGVDGAYEPGAADYW+KLRKTFGEDQ+VA
Sbjct: 142 KSIKMVTKQSPGGSFDLYITRFLDEEGNTLLSAMLHGVDGAYEPGAADYWDKLRKTFGEDQSVA 205
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A835YGN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGN4_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 4.780e-13 Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 16 IKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQTV 198
I M+TK + S DLYITRF+D G T+LSAML G YE GA YW KLR+ FG +Q +
Sbjct: 118 ITMLTKPAKDASHDLYITRFVDAEGKTVLSAMLQAEGGQYEEGAVAYWTKLREAFGAEQKL 178
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A7S1SS16_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SS16_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 1.920e-10 Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 16 IKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQTVA 201
+KMV + G +D+Y FL E G +L+ +LHG +G YEPGA + WE LR GE TVA
Sbjct: 129 VKMVKARPRTGEYDIYKVSFLREDGGPMLTCLLHGPEGNYEPGAIEAWEALRAKNGETVTVA 190
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A7S0WNZ8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WNZ8_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 4.680e-10 Identity = 24/62 (38.71%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQT 195
+ IKM+ ++ +D+Y++RF+++ G +LSA+LHGVDG Y+ A + W + + +GE QT
Sbjct: 49 KEIKMLKTKARLADYDVYVSRFVNDYGKPMLSAVLHGVDGNYDAAAVEAWTAVLEKYGETQT 110
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A2J8A500_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A500_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 6.950e-10 Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGE 186
+ ++ ++ AG +DLY TRF+ + G L+S +LHG GAYEP A + W L +GE
Sbjct: 32 KEVRFAKSKAKAGDYDLYATRFVGDEGRVLMSVILHGQQGAYEPAAVEAWGGLAAKYGE 90
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A150GY36_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GY36_GONPE) HSP 1 Score: 58.2 bits (139), Expect = 7.470e-9 Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQT 195
+ ++ ++ AG +D+Y TRF E G +LS +LHG GAY+P A W L +G+ T
Sbjct: 103 KEVRFAKSKAKAGDYDIYATRFYGEDGKVMLSTILHGSQGAYDPAAVQAWTSLASKYGDSVT 164
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A8J4GBI9_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GBI9_9CHLO) HSP 1 Score: 57.0 bits (136), Expect = 2.010e-8 Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQT 195
+ +K V ++ +G +D+Y TRFL L+S +LHG G Y+P A + W L +GE T
Sbjct: 101 REVKFVKSKAKSGEYDIYATRFLGADSKVLMSCLLHGQQGQYDPAAVEAWTNLATKYGESVT 162
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: D8UG91_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UG91_VOLCA) HSP 1 Score: 55.8 bits (133), Expect = 2.860e-8 Identity = 23/62 (37.10%), Postives = 34/62 (54.84%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGEDQT 195
+ +K ++ +G +D+Y TRFL G L+S +LHG G Y+P A W L +GE T
Sbjct: 64 KEVKFAKSKAKSGEYDIYATRFLGPDGKVLMSCLLHGNQGVYDPSAVAAWTSLATKYGETVT 125
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A2K3DK90_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DK90_CHLRE) HSP 1 Score: 56.2 bits (134), Expect = 3.840e-8 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 1
Query: 10 QSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGE 186
+ IK ++ AG +D+Y TRF E G +LS +LHG G Y+P A W L + +GE
Sbjct: 99 KEIKFAKSKAKAGDYDVYATRFFGEDGKVMLSCVLHGSAGQYDPKAVAAWNSLAQKYGE 157
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Match: A0A835Y4H2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y4H2_9CHLO) HSP 1 Score: 53.9 bits (128), Expect = 3.130e-7 Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 34 QSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAADYWEKLRKTFGE 186
++ AG +D+Y RF E G LL+ +LHG G Y+P A + W+KL + +G+
Sbjct: 110 KAKAGDYDVYAIRFQGEEGKMLLTCLLHGQAGVYQPAAVEAWKKLHEKYGD 160 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14675.3352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14675.3352.1 >prot_E-fasciculatus_F_contig14675.3352.1 ID=prot_E-fasciculatus_F_contig14675.3352.1|Name=mRNA_E-fasciculatus_F_contig14675.3352.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=68bp MATQSIKMVTKQSPAGSFDLYITRFLDEAGNTLLSAMLHGVDGAYEPGAAback to top mRNA from alignment at E-fasciculatus_F_contig14675:858..1061+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14675.3352.1 ID=mRNA_E-fasciculatus_F_contig14675.3352.1|Name=mRNA_E-fasciculatus_F_contig14675.3352.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=204bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14675:858..1061+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14675:858..1061+ >mRNA_E-fasciculatus_F_contig14675.3352.1 ID=mRNA_E-fasciculatus_F_contig14675.3352.1|Name=mRNA_E-fasciculatus_F_contig14675.3352.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=408bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14675:858..1061+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |