mRNA_E-fasciculatus_F_contig1465.3338.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1465.3338.1
Unique NamemRNA_E-fasciculatus_F_contig1465.3338.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A6H5L4W2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4W2_9PHAE)

HSP 1 Score: 957 bits (2473), Expect = 0.000e+0
Identity = 570/665 (85.71%), Postives = 583/665 (87.67%), Query Frame = 3 
Query:   75 MSPTCEAEFSWRDVHWMAPLWQLLAALERLSSLHPVSVIARKRLDVSFPDMARACRLSLKALLPGAASEVVRDEALREVARAWSPICSNSSXXXXXXXXXXXXXXXXXXXXXXXXIVRGNNGTATAGPIAKEAVDVAPFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVLETALSQXXXXXXXXXXXXXXXXXXRALPLRGGEAALEESSPLSVGEGGXXXXXXXAGVGDVLPGVKAHRHTLWLYPVMVAGGPDRASCVVRDLLREGFDATRAPTSLMPIERCTTTKYKGPPGGVSSRS-CRTPRCSAMMDSLVYLPLANNIPDSEVDRMALVLARSLWSCASSAAPGDGRPDSCSSAAGGPRKPR-NGSRERAALARSLVAFAFRLDVIAVSTLCLMVLAFSLVILAWLR 2063
            MSPTCEA FSWRDVHWMAPLWQLLAALERLSSLHP+SVIARKRLDVSF DMARACRLSLKALL G ASE VR+EALR+VARAWSPI S S XXXXXXXXXXXXXXXXXXXXX   I RGN+  ATAGPIAKEA +VAPFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVA CG XXXXXXXXXXXX       RVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQ+FTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRD Q+L        + MLREEAEYPSQSAAAYLRRVLKC LMLALTTPLL+GIILHTLA+LGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPT GVEIRL+HCNRMLSVLE ALSQ                  RALP RGG AA E+ S LSVGEG XXXXXXX  VGDVLPGVKA+RHTLWLYPVMV GGPDRAS VVRDLLREGFDATRAPTSLMPIERCTTTKYKGP  GVSS S CRTPRCSAMMDSLVYLPLANNIPDSEVDRMAL LARSLWSC SSAAPGDGR DSC S A GPRK R NGSRER ALARSLVAFAFRLDVIAVSTLC MVLA S VIL WLR
Sbjct:    1 MSPTCEAGFSWRDVHWMAPLWQLLAALERLSSLHPMSVIARKRLDVSFLDMARACRLSLKALLSGQASEAVRNEALRKVARAWSPIRSGSXXXXXXXXXXXXXXXXXXXXXXSAPI-RGNSRAATAGPIAKEAAEVAPFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVAMCGXXXXXXXXXXXXXKQ-----RVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQMFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDDQVL--------RPMLREEAEYPSQSAAAYLRRVLKCWLMLALTTPLLYGIILHTLAVLGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTEGVEIRLRHCNRMLSVLEAALSQRQRQPQPP----------RALPARGGGAAQEDPSALSVGEGXXXXXXXX--VGDVLPGVKAYRHTLWLYPVMVTGGPDRASYVVRDLLREGFDATRAPTSLMPIERCTTTKYKGPADGVSSSSPCRTPRCSAMMDSLVYLPLANNIPDSEVDRMALALARSLWSCGSSAAPGDGRLDSCGSPASGPRKSRGNGSRERTALARSLVAFAFRLDVIAVSTLCFMVLAVSFVILTWLR 639
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A2D4BCX6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCX6_PYTIN)

HSP 1 Score: 197 bits (501), Expect = 4.250e-51
Identity = 152/506 (30.04%), Postives = 231/506 (45.65%), Query Frame = 3 
Query:  153 LERLSSLHPVSVIARKRLDVSFPDMARACRLSLKALLPGAASEVVRDEALREVARAWSPICSNSSXXXXXXXXXXXXXXXXXXXXXXXXIVRGNNGTATAGPIAKEAVDVAPFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVLETALSQXXXXXXXXXXXXXXXXXXRALPLRGGEAALEESSPLSVGEGGXXXXXXXAGVGDV-LPGVKAHRHTLWLYPVMVAGGPDRASCVVRDLLREGFDATRAPTSL 1667
            LE+LS+  P ++  RK+LDV++ D+A    LS   L      E  R   L+++A+ W P   +                                    + P +   +  A +    T FDL L+ + LP GS ++CSA+TIPDM+ +   HGLVPVPVDLD +TLA +   +   V                        + +A+ +AHVFG +  +  ++E A    L++ EDCAQ F G+  Y G  ++D + FSFG IK ATAFGG + R+++A IL        + M R E  YPS+S + +++R+LK   +  L+TP L+GI+LH    +G +HD+V+    +GF    L+  IRHR S+PLL +L  R++      +E+R +   +++  +                        R LP                               DV +PG +A  H  WL+PV+V   P R   VV+ +  EGFD T   T L
Sbjct:   25 LEQLSASAPWAIFPRKKLDVTYGDIASGL-LSCLTL-----REAQRXXYLQKIAQHWDPTGLSMVTLSVRYDYYSIRFF--------------------SAPHSSILLTAAIY---STGFDLLLQTIKLPPGSEIICSAITIPDMIYLVRYHGLVPVPVDLDADTLAMDVSKIRDVVTE----------------------KTKAVMIAHVFGTRHPLNEVLELADELNLMVIEDCAQAFAGMK-YTGDREADVSMFSFGTIKNATAFGGALIRVKNADIL--------EEMKRRETRYPSRSTSFFIKRLLKYGALHGLSTPALYGILLHVCRGIGADHDKVITSAIRGFSGGDLVSLIRHRPSMPLLGLLHRRLTCVDDAYIELRKRKSEQLMEAI------------------------RDLP-------------------------------DVEIPGRRAKDHYYWLFPVVVTS-PTR---VVKFMNAEGFDVTSGATQL 411
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A537CG90_9PROT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CG90_9PROT)

HSP 1 Score: 195 bits (496), Expect = 6.060e-51
Identity = 120/282 (42.55%), Postives = 162/282 (57.45%), Query Frame = 3 
Query:  471 AVDVAPFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRL 1316
            A D    LSVR+ FDL L AL  PRGS ++ SA+TI DMV I E HGLV VP+DLD +TLA  P ++   V R                      R +AI  AH+FG+++ M  IVE + RHGLL++EDCAQ F+G  GY G+P+SD + FSFG IK ATA GG + R+RDA +        R TM   +  Y  QS  AYLR++ KC+ +  L+  L + + +   A L I HD V+ + ++ F    L RAIRHR S  LL +L  R++R+ T  +  R+
Sbjct:   41 AGDAIACLSVRSGFDLLLAALAWPRGSEILVSAITISDMVRIIERHGLVAVPIDLDMDTLAMRPESISRSVTR----------------------RSKAIVAAHLFGSRMPMEPIVEVSQRHGLLVFEDCAQAFSG-DGYRGYPESDVSMFSFGPIKTATALGGALLRVRDADL--------RNTMQAVQLNYRPQSQWAYLRKLFKCAALKLLSGRLPYTLFVAGCAALRISHDAVIGRAARSFAGLDLFRAIRHRPSRALLLLLRRRLTRFDTRTIAGRV 291
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A8K1CHQ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ7_PYTOL)

HSP 1 Score: 194 bits (494), Expect = 1.950e-50
Identity = 128/392 (32.65%), Postives = 194/392 (49.49%), Query Frame = 3 
Query:  492 LSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVLETALSQXXXXXXXXXXXXXXXXXXRALPLRGGEAALEESSPLSVGEGGXXXXXXXAGVGDVLPGVKAHRHTLWLYPVMVAGGPDRASCVVRDLLREGFDATRAPTSL 1667
            LSVRT FDL L+ L LP GS ++CSA+TIPDM+ +   HGLVPVP+DLDP+TLA +P  L + V                        + RAI +AH+FG    +  I++ A    L++ EDCAQ F G+  Y G   +D + FSFG IK ATAFGG + R+++  IL        + M R E+ YP++S   +L+R++K   +  ++TP L+G++LH    +G  HD V+    +GF    L+  IR+R S+PLL +L  R++      + +R     +++                                    AA++++  +                  ++PG KA  H  WL PV+V   P+R   VV+ + ++GFD T   T L
Sbjct:   85 LSVRTGFDLLLQVLKLPAGSEILCSAITIPDMIYLVRYHGLVPVPIDLDPDTLAIDPEKLRSAVT----------------------DKTRAIMIAHIFGTVHPLGAILDLAEELNLMVIEDCAQAFAGMD-YTGERGADVSMFSFGTIKTATAFGGAMIRVKNPSIL--------EEMKRRESRYPTRSTTFFLKRLVKYGFLHGVSTPALYGLLLHGCRAVGANHDSVITAAIRGFSGGELVSLIRYRPSMPLLGLLHRRLTDVDDAYIHLRKSKSEQLM------------------------------------AAIQDTPNV------------------LIPGYKAMNHYYWLCPVVVPS-PER---VVKHMNQQGFDVTSGATQL 387
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: K9TBL7_9CYAN (Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9TBL7_9CYAN)

HSP 1 Score: 184 bits (468), Expect = 3.310e-47
Identity = 116/287 (40.42%), Postives = 163/287 (56.79%), Query Frame = 3 
Query:  492 LSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLRE-EAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVLE 1349
            LSVR+ +DL L+AL LP GS V  SALTIPDMVTI   HGLVPVP+DLDPET+AP+P +L+    R  G                   R R I +AH+FG +VD+  I+ A  R G +L EDCAQ FT   G+ GHP++D + FSFG IK ATA GG + R+RD Q+            LR+ ++ YP Q +  Y RR+LK   +  L++   F  ++      GI++D ++ +  KGFPK  L+  +RH+   PLL +L  R+  Y    +  +     R++ +L+
Sbjct:   52 LSVRSGWDLLLQALQLPPGSEVAMSALTIPDMVTIVRAHGLVPVPIDLDPETMAPDPASLD----RATGP------------------RTRVIIIAHLFGGRVDLAPILAARDRVGAILVEDCAQAFTP--GFRGHPEADVSCFSFGTIKFATALGGALLRVRDPQLAD---------CLRQIQSTYPVQDSGNYTRRLLKYLGLKTLSSRPGFTALIWGCRRWGIDYDRLLNQSVKGFPKDELIWRLRHQPCAPLLALLRHRLQGYTEQRLAEQTHRGQRLIQLLQ 305
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A523MR06_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A523MR06_9BACT)

HSP 1 Score: 184 bits (467), Expect = 4.830e-47
Identity = 110/263 (41.83%), Postives = 149/263 (56.65%), Query Frame = 3 
Query:  492 LSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRI 1280
            LSVR+ FDL L A + P GS V+ SALTI DM  I E HGLV +P+D+D ET  P   AL A V                          RAI V H++G ++D+  IV  A   GL++ EDCAQ F G  GY GHPDSD A FSFG IK ATAFGGG+ R+RDA +L+         M + + EY  Q   AY  R+LK +++ A++  +++G +L  L  +G++HD +V +L++GF        IR R  + LL+ML  R+
Sbjct:   49 LSVRSGFDLLLSAAEFPVGSEVIFSALTIADMPRIVEHHGLVAIPIDIDRETTQPRVDALHAAVTS----------------------NTRAIVVTHLYGGRLDVEPIVAFARTRGLMVIEDCAQAFAG-PGYTGHPDSDVAMFSFGPIKTATAFGGGLLRVRDANLLA--------RMRQRQQEYAVQPTGAYAARLLKYAVLHAVSGQVMYGTVLALLRAVGVDHDRLVHRLTRGFSGPEFFARIRRRPCVALLRMLHRRL 280
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: UPI0019FC8CB6 (DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FC8CB6)

HSP 1 Score: 182 bits (463), Expect = 1.650e-46
Identity = 111/285 (38.95%), Postives = 154/285 (54.04%), Query Frame = 3 
Query:  492 LSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVL 1346
            LSVR+ FDL+LKA+DLP GS V+ SA+TIP MV I E HGL+PVPVD+D +TL+ +P  LE  +                        R RAI VAH+FG+++D+  I   A RHGLLL +DCAQ + G   YLGH  SD   FSFG IK  TA GG +   RD  +LS         M +  A YP Q    +  RV+   L+  LT P +  +        GI++D+++ +  + F    L+  IRH+  +PLL++LA R+      G++ R+    R+   L
Sbjct:   61 LSVRSGFDLFLKAIDLPGGSEVIVSAITIPPMVQILEHHGLIPVPVDVDIDTLSVDPTELELLIG----------------------PRTRAILVAHLFGSRMDLKPIAAIAQRHGLLLMKDCAQAYAG-SEYLGHSTSDVVMFSFGPIKTQTALGGAVLHFRDPTLLS--------RMRQLHATYPCQPKCPFWHRVVLFMLLRLLTRPPILQLFARVCRWRGIDYDQLLSQNLRSFSGGNLIEHIRHQPCVPLLRLLARRLRNKQASGIKQRMALVQRLTPYL 314
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A067CZ76_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CZ76_SAPPC)

HSP 1 Score: 182 bits (463), Expect = 2.030e-46
Identity = 106/266 (39.85%), Postives = 148/266 (55.64%), Query Frame = 3 
Query:  492 LSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRY 1289
            LSVRT FDL+L+ ++ P+GS ++CS++TIPDM+ +   HGLV VP+DLD  TLA +   L A V                        + +AI VAH+FG   ++  +VE A  H LL+ EDCAQ + G   Y GHP  D + FSFG IK +TAFGG + R+ D  IL G        M R    Y  +S   +L+R++K S +  +T+P LFG+ L     LG  HDEV+    +GF    L+  +R R S+PLL +L  ++S Y
Sbjct:   69 LSVRTGFDLFLQTMNYPKGSEIICSSITIPDMIKVLHHHGLVAVPIDLDDTTLAMQTETLAAAVT----------------------DKTKAILVAHIFGTLTNLDPVVEVANAHKLLVIEDCAQAYCG-PSYKGHPKVDVSMFSFGTIKTSTAFGGAMFRVLDNDILDG--------MKRRNNRYEPRSRTFFLQRLVKYSALHGMTSPPLFGLFLKACRQLGYNHDEVITSQIRGFSGGDLITLLRQRPSMPLLGLLHRKLSTY 303
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A7X7F430_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7F430_9BACT)

HSP 1 Score: 181 bits (460), Expect = 4.540e-46
Identity = 117/288 (40.62%), Postives = 157/288 (54.51%), Query Frame = 3 
Query:  486 PFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSG-ESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVL 1346
            P LSVRTAFDL  KALD P GS VV SALTIPDMV I E H LVPVP DL+   +AP+  ++   +                          RAI VAH+FG+++ +  I+E A +HGLL+ EDCAQ F G   + GH  +D + FSFG IK ATAFGGG+ R+ D +ILS  ES H         AEYP QS  +YL+R  K S++  ++   L   IL      G ++D  +  + + FP    +  +RH+ S PLL +L  R+S +    +  R    NRM  ++
Sbjct:   46 PCLSVRTAFDLLWKALDFPPGSEVVMSALTIPDMVRIVEHHRLVPVPADLNVADMAPDLDSIRRAITPA----------------------TRAIVVAHLFGSRIPIEPILEIARQHGLLVIEDCAQAFAGCH-FDGHAGADVSMFSFGPIKTATAFGGGVFRVGDPRILSRMESLH---------AEYPVQSRGSYLKRFAKYSVLKGMSCRPLRDAILAVYRAAGFDYDRWISGVVRAFPGPKWLDRLRHQPSAPLLSLLERRLSTFDETWLAARTARGNRMARLM 301
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Match: A0A355F2Z0_9BACT (Aminotransferase DegT n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A355F2Z0_9BACT)

HSP 1 Score: 180 bits (456), Expect = 9.300e-46
Identity = 136/420 (32.38%), Postives = 200/420 (47.62%), Query Frame = 3 
Query:  444 ATAGPIAKEAVD-----VAP-------FLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVARCGGXXXXXXXXXXXXXXXXXXXRVRAIYVAHVFGAQVDMTHIVEAAARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPLLFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTGGVEIRLQHCNRMLSVLETALSQXXXXXXXXXXXXXXXXXXRALPLRGGEAALEESSPLSVGEGGXXXXXXXAGVGDVLPGVKAHRHTLWLYPVMVAGGPDRASCVVRDLLREGFDATRAPTSL 1667
            A+  P  +EAV+     VAP        LSVR+ FD  L  LD P GS V+ SA+TI DMV I E HGLVPVPVDLDP +L   P +L+  +                        R RA+ VAH+FG+++ +  +++ A  HGL + ED AQ F  L   L  P +D + +SFG IK  TA  GG+   RD ++L        + + R +  +P +S  ++L R+LK S+++ALT P L+ + +    + G  HD V+   ++GFP  G ++ IRHR S PLL +LA R+ R+    +  R        +  E A++                    A+P       LE                         PG +A RHT W++P++     +    +V  L ++GFDATR  +SL
Sbjct:   20 ASLAPPRREAVETVLREVAPGGDHRLACLSVRSGFDALLTVLDYPPGSEVLVSAITIRDMVRIVEAHGLVPVPVDLDPRSLQVRPESLQRAIG----------------------PRSRAVLVAHLFGSRMPLEPVLDVARAHGLFVVEDGAQAFASLDA-LAPPQADVSLWSFGPIKTTTALAGGLLCFRDPRLL--------EQVRRHQDGWPERSRWSFLFRLLKYSVLMALTWPPLYTLFVALCRLAGKSHDAVISANTRGFPGDGFLQQIRHRPSTPLLALLARRLQRFDPAAIAART-------AAAEQAMA--------------------AMPF------LER------------------------PGDRAARHTHWVFPIL----NENPVALVNTLWKQGFDATRGASSL 347
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1465.3338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4W2_9PHAE0.000e+085.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2D4BCX6_PYTIN4.250e-5130.04Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A537CG90_9PROT6.060e-5142.55DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A8K1CHQ7_PYTOL1.950e-5032.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K9TBL7_9CYAN3.310e-4740.42Putative PLP-dependent enzyme possibly involved in... [more]
A0A523MR06_9BACT4.830e-4741.83DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
UPI0019FC8CB61.650e-4638.95DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chlo... [more]
A0A067CZ76_SAPPC2.030e-4639.85Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A7X7F430_9BACT4.540e-4640.63DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A355F2Z0_9BACT9.300e-4632.38Aminotransferase DegT n=1 Tax=Acidobacteria bacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1465contigE-fasciculatus_F_contig1465:7810..13990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score922.9
Seed ortholog evalue8.3e-266
Seed eggNOG ortholog2880.D8LSA1
EggNOG free text desc.DegT/DnrJ/EryC1/StrS aminotransferase family
EggNOG OGs2RN8Q@2759,COG0399@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPyridoxal phosphate-dependent transferase
Ec32 orthologEc-12_004290.1
Exons8
Model size2943
Cds size1992
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1465.3338.1prot_E-fasciculatus_F_contig1465.3338.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1465 7884..13113 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927949.9712074-UTR-E-fasciculatus_F_contig1465:7809..78831622927949.9712074-UTR-E-fasciculatus_F_contig1465:7809..7883Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1465 7810..7883 +
1695995763.1427422-UTR-E-fasciculatus_F_contig1465:7809..78831695995763.1427422-UTR-E-fasciculatus_F_contig1465:7809..7883Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1465 7810..7883 +
1622927950.129774-UTR-E-fasciculatus_F_contig1465:13113..139901622927950.129774-UTR-E-fasciculatus_F_contig1465:13113..13990Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1465 13114..13990 +
1695995763.2387388-UTR-E-fasciculatus_F_contig1465:13113..139901695995763.2387388-UTR-E-fasciculatus_F_contig1465:13113..13990Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1465 13114..13990 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927949.9873538-CDS-E-fasciculatus_F_contig1465:7883..81551622927949.9873538-CDS-E-fasciculatus_F_contig1465:7883..8155Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 7884..8155 +
1695995763.1528616-CDS-E-fasciculatus_F_contig1465:7883..81551695995763.1528616-CDS-E-fasciculatus_F_contig1465:7883..8155Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 7884..8155 +
1622927950.0009396-CDS-E-fasciculatus_F_contig1465:8928..93791622927950.0009396-CDS-E-fasciculatus_F_contig1465:8928..9379Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 8929..9379 +
1695995763.1640234-CDS-E-fasciculatus_F_contig1465:8928..93791695995763.1640234-CDS-E-fasciculatus_F_contig1465:8928..9379Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 8929..9379 +
1622927950.0156019-CDS-E-fasciculatus_F_contig1465:9775..100011622927950.0156019-CDS-E-fasciculatus_F_contig1465:9775..10001Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 9776..10001 +
1695995763.1816692-CDS-E-fasciculatus_F_contig1465:9775..100011695995763.1816692-CDS-E-fasciculatus_F_contig1465:9775..10001Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 9776..10001 +
1622927950.0290596-CDS-E-fasciculatus_F_contig1465:10512..106671622927950.0290596-CDS-E-fasciculatus_F_contig1465:10512..10667Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 10513..10667 +
1695995763.191884-CDS-E-fasciculatus_F_contig1465:10512..106671695995763.191884-CDS-E-fasciculatus_F_contig1465:10512..10667Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 10513..10667 +
1622927950.0460558-CDS-E-fasciculatus_F_contig1465:10987..110711622927950.0460558-CDS-E-fasciculatus_F_contig1465:10987..11071Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 10988..11071 +
1695995763.2013743-CDS-E-fasciculatus_F_contig1465:10987..110711695995763.2013743-CDS-E-fasciculatus_F_contig1465:10987..11071Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 10988..11071 +
1622927950.058066-CDS-E-fasciculatus_F_contig1465:11465..118841622927950.058066-CDS-E-fasciculatus_F_contig1465:11465..11884Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 11466..11884 +
1695995763.2106104-CDS-E-fasciculatus_F_contig1465:11465..118841695995763.2106104-CDS-E-fasciculatus_F_contig1465:11465..11884Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 11466..11884 +
1622927950.0715017-CDS-E-fasciculatus_F_contig1465:12179..123171622927950.0715017-CDS-E-fasciculatus_F_contig1465:12179..12317Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 12180..12317 +
1695995763.2212436-CDS-E-fasciculatus_F_contig1465:12179..123171695995763.2212436-CDS-E-fasciculatus_F_contig1465:12179..12317Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 12180..12317 +
1622927950.0870361-CDS-E-fasciculatus_F_contig1465:12866..131131622927950.0870361-CDS-E-fasciculatus_F_contig1465:12866..13113Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 12867..13113 +
1695995763.2304711-CDS-E-fasciculatus_F_contig1465:12866..131131695995763.2304711-CDS-E-fasciculatus_F_contig1465:12866..13113Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1465 12867..13113 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1465.3338.1

>prot_E-fasciculatus_F_contig1465.3338.1 ID=prot_E-fasciculatus_F_contig1465.3338.1|Name=mRNA_E-fasciculatus_F_contig1465.3338.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=664bp
MSPTCEAEFSWRDVHWMAPLWQLLAALERLSSLHPVSVIARKRLDVSFPD
MARACRLSLKALLPGAASEVVRDEALREVARAWSPICSNSSSGSSSSNRR
SGCGPTPAPAPAPAPIVRGNNGTATAGPIAKEAVDVAPFLSVRTAFDLYL
KALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALE
AEVARCGGGGAVSGGEQQQQQQQQQQQRVRAIYVAHVFGAQVDMTHIVEA
AARHGLLLWEDCAQIFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIAR
IRDAQILSGESCHHRKTMLREEAEYPSQSAAAYLRRVLKCSLMLALTTPL
LFGIILHTLAILGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAW
RISRYPTGGVEIRLQHCNRMLSVLETALSQQQQQQQQQQQQQQQQRPPRA
LPLRGGEAALEESSPLSVGEGGGEEGGGGAGVGDVLPGVKAHRHTLWLYP
VMVAGGPDRASCVVRDLLREGFDATRAPTSLMPIERCTTTKYKGPPGGVS
SRSCRTPRCSAMMDSLVYLPLANNIPDSEVDRMALVLARSLWSCASSAAP
GDGRPDSCSSAAGGPRKPRNGSRERAALARSLVAFAFRLDVIAVSTLCLM
VLAFSLVILAWLR*
back to top

mRNA from alignment at E-fasciculatus_F_contig1465:7810..13990+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1465.3338.1 ID=mRNA_E-fasciculatus_F_contig1465.3338.1|Name=mRNA_E-fasciculatus_F_contig1465.3338.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6181bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1465:7810..13990+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGCCGCCGGCCTCATCCACAACTGCTCACCGAGCACGACTCCGTGACACG
CCACGTGCTCACAGGCGCGATCACATGTCGCCAACATGCGAAGCAGAGTT
CTCTTGGCGGGATGTCCACTGGATGGCGCCTCTGTGGCAGCTTCTCGCTG
CATTGGAGCGCTTGTCCAGCCTTCATCCCGTGTCGGTCATAGCGAGGAAG
CGACTAGACGTCTCCTTTCCAGACATGGCACGAGCGTGTCGGCTCAGCCT
GAAGGCCTTGCTGCCAGGAGCAGCCAGCGAGGTTGTTCGGGACGAAGCGT
TGCGAGAAGTTGCACGCGCCTGGTCTCCGATTTGCTCCAATTCCAGGTCC
TGTGTGATTGTTCAAATAGTTGATGCTCTGTGGTTGCAGGGAGGTTGCGC
CGCATGTCTTGACTACGCCGTCCTGCGAGAGCGAGCGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGATAGGGAAGACGTAGACTTGAGGGAGA
GCCAGCACCACCGGCGAGGAAGGAGTTCGGGCTGTCTGTGTGACTGCTGT
GCACGCCAGGCCAATTCAGCGTTTTGTGACTGCCACACACACAACAACAG
GCTTACAAGTACATTGATTCTCGCTACGCGTATGTACGGCGATGATGAAC
AAGCGTTCACGCTCACGCTCACTTTACTTTTTACGTGCTTAATGTTACCC
TTGCAAGGAAACCGATACCTCCCCGTGCACTGAATAGGGCGGATAAGGAG
GAATTGAGTTCACAGCCATGGCCAATGGCGTAACTAGAAACTATTCTTCC
GCCTGCTTCTAAACACGCGTTGCCGAGGCGATATTACGTGTAGGAAATAC
TACGTTGCTGGATCGAGTTTGTTTGGTGCTCCCGTACAGCAGTAGACTAT
TTGCTTCGCTTGGCGCGGGAGTCGGGAAGTGGGGACTCCAGTAGTTTTTA
CGGGCCTAGGTTCGTCATCTGATGAGACCTCATGAGTCACTTAACAGACC
GTAAATAAACCTCCAGAACAGCGGCGAATCATTGCCGTTTGTTGCCGGTA
ATGCTGATGCCAAAGCGCCTTCGAAGCTGACCTCGCCACAACGCTCTGGT
GCTCTTTGTTCCCTCACAGCAGCGGCAGCAGCAGCAGCAACCGGAGGAGC
GGATGCGGACCAACGCCGGCGCCGGCGCCGGCACCCGCACCGATAGTACG
CGGCAACAACGGAACCGCCACCGCCGGACCCATTGCTAAGGAGGCGGTGG
ATGTGGCTCCATTCCTCTCCGTCCGCACGGCGTTCGACCTGTACCTGAAG
GCTCTCGACCTCCCCCGAGGGAGCCTCGTGGTCTGCTCCGCCCTGACTAT
CCCCGACATGGTGACCATTTTCGAGGAGCACGGGCTGGTCCCGGTACCCG
TCGATCTTGACCCGGAGACCTTGGCACCTGAGCCCGGGGCGTTAGAGGCC
GAAGTGGCGAGGTGTGGAGGCGGCGGCGCGGTAAGCGGCGGCGAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTGTGAGGGCGATCTATGTTG
CTCACGTGTTCGGGGCCCAGGTGGGTGGTGTGGTGTGCGTGTGGCTTGGT
CGGACGCGGGTGTGGATGGCTGCTTTGGTTGAGTGCTGCGGCATTTCTTT
GTCACGAAGTATTTTAGACCCAGCTGTTGGTTGGTTGGAAGTGCGGTGCG
TTGGTCGATGCAGAAGTCGACAAAAAGCAGCTACAACCGAGCACGCGAAT
GGCACCCCGTATCATCGGCTCTCCCTTCGACCGTCACGTTACCAGCCGCG
CCGTGTTTTCCGCGCAAACACCAATTTCTGAGGCGTTTGAATGTTCCTCC
CCCAAATCTCGCCTGCGCCGGCCATTTGTATGCCCTCCCCCACACACAAA
CGTGCCTCTTCTCTTTCCCACCATGCTGCAAAAACGCCCTGTGGTCCACA
AACGATACGTACATAGGTGGACATGACGCACATCGTGGAGGCCGCTGCGC
GCCACGGCCTCCTTCTGTGGGAGGACTGCGCCCAGATATTCACCGGCCTC
GGGGGTTACCTCGGCCACCCCGACAGCGATGCCGCCTTCTTCAGCTTCGG
CGTGATAAAGAGGGCGACTGCTTTCGGCGGCGGCATTGCGCGCATCCGTG
ATGCCCAAATCCTGTCAGGCGAGAGCTGCCATCATAGGAAGAGTGCCTAC
GACTATCGTTGTCGTTGTTGTTTCAGTCGTCATGTGTGTATGGCGGCCAG
GACGTCATAGACGAGACGCCCAAGCCCCGCGTGTTGTGTAGTTTCCCAAC
CGGCCGCCGCGGTGGGGAGAGTCTTGTGCTCCAAGCTAAAAAAAAACAAT
GATGTATGCAAACAAACCACCTCTACTTGTTGCGGCGGCCGAGCTGCCCG
TCGGCATCATCTTGGTGGGTTGTCAGGTTATCTTCGTAGGCGTTCTCGGC
GAGTCGAAGGAAGGAATACCCTTTACAGTTCGTACCTCACCTCTGGTGCC
CCTGTTGTTGTTGTTGATGTTTGTCTTCACATTAAAAACCGTTCCGATCT
CTCTGCCCAGTACTGCTGTACCTTCATCTGTCCGTACTGGTCTAACACCT
GACCCGTCTTGCTTGCTTCAACTGTCTGCCTTGTCTAGCTAGATCTGTTC
TCTATCTGGCTCATTTGTGACACCCGAAGCGAACGTCTCATCGTTTTTTT
CAGCCATGCTACGGGAGGAGGCCGAATACCCGTCACAGTCCGCGGCGGCC
TACCTTCGCCGGGTGCTCAAGTGCTCGCTGATGCTGGCCCTTACGACGCC
GCTGCTGTTCGGCATCATCCTCCACACCCTGGCGATCCTGGGCATTGAGC
ACGACGAGGTGGGGGCAGCCCAGACCAAACAGTTGTCTGCAGCTGAAGAG
TTTTACACATATTGCTTCTCAACACGCACTACAGCAAGCAAATCTATGCT
GAGGAACCCGTCCGTTCATGGTCGTTTCGGCGAGATGTGTTGTTGTTTGG
CCCCAGTTTCTGGGAACCAACTTCCCTTTTCTCTTCGACACTCTGCGTCG
CAAGCTTCGTCGTCAAGCGAGGGTCGCTCACCCGCTCCAGCTCTTGTGTT
TTCAAAGCGAGTCGCAACTTGGTTGTAGGATTATTTAATTTACGTTTTCA
GACTGCGGTGCGTTGCTGGCGAAAACAGGTGGTGATGAAGCTCAGCAAGG
GCTTCCCAAAGAAAGGGCTAATGAGGGCAATCAGACACCGGGCTTCCATC
CCCTTGCTGCAGGTATGGTATGTACCAGATGCAGGCACTCCTGCTCGCTA
CAGCAGTATGCGGATCGACCAGCGTGGCACCTCTTTTATTTATTTTCTTG
CAGCAGAACAGCAATGTTTATTAGTGTTGTTTTTTTATGTGTGGAGTACT
GACATCTCAAGGGGCGTTCCGAAAGCAGCTGAGTGGTATGATCGTGGCGA
GGCGTAGCCGCCAGGGCATGGCGTTTCCATTCTACGCTGCTTCAGCTAGG
GAGTAGTAGCGAATCAAGGGCGGTTCAAAGAATCTCGTTTCGATACCCTG
CTGTTGTTGGGAAATCTCGTGACCGTCGAACTATAAGGTAGCTATGAATT
GATTGGTTCGCTGTTTTCTCTTGCCTCCACCGCCGCCGCCGCTGAGGGCG
CAACAGATGCTCGCCTGGAGAATATCCCGGTATCCCACCGGAGGCGTCGA
GATCCGTCTGCAGCACTGCAACCGCATGCTCAGCGTTCTCGAGACCGCCT
TGTCGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGCCCGCCAAGAGCGCTGCCGCTCCGGGGAGGAGAGGCGGCTCTAGA
AGAATCATCGCCGCTTTCTGTCGGGGAGGGGGGGGGGGAAGAAGGAGGAG
GAGGAGCGGGGGTGGGCGACGTTCTGCCCGGCGTCAAGGCTCACCGGCAC
ACGCTCTGGTTGTACCCTGTGATGGTAGCGGGGGGTCCCGACCGGGCGAG
CTGCGTCGTCAGGGATCTCTTGCGGGAGGGGTTCGACGCCACTCGAGCGC
CGACCTCGCTGATGCCCATCGAGCGGTAAGCAGCCTGTCTGGCCTCCTCC
CCCCTTTTGATGATGATGACGGCGGGTGTGTGTGTCCGTGCGTCTGTCTA
GAACGGGTTGGGTGTTGACCCGTTTGGCGTAGACGAAGGAGGTGGGCCGC
CTTTGTTGCGAACTTGCGCGCGCGTAATATGATGGCGATACGATGGGATG
GGGGAAGTAAGGCGCTGGTGTGAGATGATAGCTGTCGTCGTGTGCTCCCG
CCACACATGAATGACCTTTCGGCCTGCCTGGCGACTGCCTGCCTGGCTTG
TTCTGTTTTGCTTGTTCCAGGTGCACAACCACCAAGTACAAGGGCCCCCC
TGGCGGCGTGTCGTCGCGGTCGTGTCGCACGCCGAGGTGCTCGGCGATGA
TGGACTCGTTGGTTTATCTCCCGCTGGCCAACAACATCCCGGACTCTGAG
GTGGACAGGTCAGTCAAGTGTAGAGATTTCGAACTGCATCCTTCCGCAAA
CACGCCCGGCGTCGTGGACGTTGTTAGCAGTTCGGATCAGGGGGCTGCGA
AGAAGAGCAAGGTAGCTCGTCGACACATTCTGCGGTTGCGAAATGCAGCA
GGAGTGGGGTGCTCTCGTGTGCCAGCCGGAAGTCAAGTCGGTTCTACCTT
ACAATACACACACAAACAACCCGTTCGCTTCCGCCTCTCCTTTCTCAATT
GGCAACATGTTTTTTCTCGATACACTGCCTGCCGTTGTTGTCGAAAAGCC
CACCCCTTACCTTGCGAAATTGTATCTCAGCAGCAGCAATCCACCCCCAG
TGGGCGTCAAGCATTGTACGTGGAAATAAGAATTGGCACCCCGCACACGT
CTGTCCCGTCCCGTGATACCGTTTTTCGTGTGACTGCTGTCCCATCCCGT
ATAGTAACGCGTTTTTCGTGCGCCATCGCCCTAGACCGTTCACCGTCCAA
CACACATACTCTTTTTTCGTCCCTGCCTGAACACACCCGGCGTATTCGCG
TTGGCAGGATGGCTCTAGTGCTGGCGAGGTCGTTGTGGTCGTGTGCTTCT
TCAGCGGCGCCGGGGGACGGCAGACCGGACTCATGCAGCAGTGCCGCCGG
CGGGCCGCGCAAGCCGCGGAACGGTAGCAGGGAGCGCGCCGCGTTAGCCC
GAAGCCTGGTGGCCTTCGCATTTCGCCTGGATGTGATAGCCGTGTCGACG
TTGTGCTTGATGGTGTTGGCGTTTTCCTTGGTGATTCTGGCGTGGTTGCG
GTGACCTACCTCCCTTCCTTGCTCGATAGTATGCTGCGCCAAGTACCAAA
GGGGAATGTGTGGGGGTATTGTAGGGAAACCCGCTCTCCCCCGCCACCCC
TTCCGGAGCCCCTTTGGTGGACTTGGCGGGATGTTTTGACAAGACCAACC
ACGGTTGTGTTGGCCAAAGTCGCATTAGTATGTATGACTAGGCGGTTGAT
TCCTTTCGAATCCTTCTCATAAAAATGTGCTATTTAATAGAAGTTGGTGA
CGGGCTTCTGGGGCGTGTGTGTCTCGATTTCTGTGGGCACGTCACCTTCC
AAGGAACCCGGGGCGCTTGGTAGTTTCCTCCAGCACCCTCGTTCTCCCGG
ATGTAGATACCGTTGGAGTTGATTGAGGGCGCGTCGGTTCTGTCGATAGG
TTTAGGGTCATGTTGCTGGACTTCGACTTCTAGATGTGACTGGTATTGCT
GTGTGCTTGGCTTCCGACTAGGCTGGTGTGGTAGATGAGCTTGGTGTCAC
TGAGTAGGTTTGGGAGGAGCTCGGGCTCGTTCAAATGCTCATCTTTGCTA
CTACTGTAGCCCTTCTTCGTCCGTATGGCTAGCTTTTGTACAGGAAGAAC
GTGGCTCGCTCGGAATTGTTGTGCACGAGCTGCTCGGATGTGTGCACAGA
CACACACGTGACTGTGTTCAGGCGAGCCTCTGACACTCTACAGCAGTAGT
CTAGACGGGTTAGGTGACGACGTCACGACACGAGTGAAGCGTATAAATAG
TATAGATCTGATGATGGGTGCTACTCAGTGACAGGTTGGATTTTGTAAAA
ATAATCTGGTACATCGGTTTTCAGGGACAATCCCACACCACCCAGTGCAC
ATCGATGGGCGTAATCGGATCACTGCTTCAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1465:7810..13990+

>mRNA_E-fasciculatus_F_contig1465.3338.1 ID=mRNA_E-fasciculatus_F_contig1465.3338.1|Name=mRNA_E-fasciculatus_F_contig1465.3338.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1465:7810..13990+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCGCCAACATGCGAAGCAGAGTTCTCTTGGCGGGATGTCCACTGGAT
GGCGCCTCTGTGGCAGCTTCTCGCTGCATTGGAGCGCTTGTCCAGCCTTC
ATCCCGTGTCGGTCATAGCGAGGAAGCGACTAGACGTCTCCTTTCCAGAC
ATGGCACGAGCGTGTCGGCTCAGCCTGAAGGCCTTGCTGCCAGGAGCAGC
CAGCGAGGTTGTTCGGGACGAAGCGTTGCGAGAAGTTGCACGCGCCTGGT
CTCCGATTTGCTCCAATTCCAGATGTCGCCAACATGCGAAGCAGAGTTCT
CTTGGCGGGATGTCCACTGGATGGCGCCTCTGTGGCAGCTTCTCGCTGCA
TTGGAGCGCTTGTCCAGCCTTCATCCCGTGTCGGTCATAGCGAGGAAGCG
ACTAGACGTCTCCTTTCCAGACATGGCACGAGCGTGTCGGCTCAGCCTGA
AGGCCTTGCTGCCAGGAGCAGCCAGCGAGGTTGTTCGGGACGAAGCGTTG
CGAGAAGTTGCACGCGCCTGGTCTCCGATTTGCTCCAATTCCAGCAGCGG
CAGCAGCAGCAGCAACCGGAGGAGCGGATGCGGACCAACGCCGGCGCCGG
CGCCGGCACCCGCACCGATAGTACGCGGCAACAACGGAACCGCCACCGCC
GGACCCATTGCTAAGGAGGCGGTGGATGTGGCTCCATTCCTCTCCGTCCG
CACGGCGTTCGACCTGTACCTGAAGGCTCTCGACCTCCCCCGAGGGAGCC
TCGTGGTCTGCTCCGCCCTGACTATCCCCGACATGGTGACCATTTTCGAG
GAGCACGGGCTGGTCCCGGTACCCGTCGATCTTGACCCGGAGACCTTGGC
ACCTGAGCCCGGGGCGTTAGAGGCCGAAGTGGCGAGGTGTGGAGGCGGCG
GCGCGGTAAGCGGCGGCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGTGTGAGGGCGATCTATGTTGCTCACGTGTTCGGGGCCCAGCAGCG
GCAGCAGCAGCAGCAACCGGAGGAGCGGATGCGGACCAACGCCGGCGCCG
GCGCCGGCACCCGCACCGATAGTACGCGGCAACAACGGAACCGCCACCGC
CGGACCCATTGCTAAGGAGGCGGTGGATGTGGCTCCATTCCTCTCCGTCC
GCACGGCGTTCGACCTGTACCTGAAGGCTCTCGACCTCCCCCGAGGGAGC
CTCGTGGTCTGCTCCGCCCTGACTATCCCCGACATGGTGACCATTTTCGA
GGAGCACGGGCTGGTCCCGGTACCCGTCGATCTTGACCCGGAGACCTTGG
CACCTGAGCCCGGGGCGTTAGAGGCCGAAGTGGCGAGGTGTGGAGGCGGC
GGCGCGGTAAGCGGCGGCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCGTGTGAGGGCGATCTATGTTGCTCACGTGTTCGGGGCCCAGGTGG
ACATGACGCACATCGTGGAGGCCGCTGCGCGCCACGGCCTCCTTCTGTGG
GAGGACTGCGCCCAGATATTCACCGGCCTCGGGGGTTACCTCGGCCACCC
CGACAGCGATGCCGCCTTCTTCAGCTTCGGCGTGATAAAGAGGGCGACTG
CTTTCGGCGGCGGCATTGCGCGCATCCGTGATGCCCAAATCCTGTCAGGC
GAGAGCTGCCATCATAGGAAGAGTGGACATGACGCACATCGTGGAGGCCG
CTGCGCGCCACGGCCTCCTTCTGTGGGAGGACTGCGCCCAGATATTCACC
GGCCTCGGGGGTTACCTCGGCCACCCCGACAGCGATGCCGCCTTCTTCAG
CTTCGGCGTGATAAAGAGGGCGACTGCTTTCGGCGGCGGCATTGCGCGCA
TCCGTGATGCCCAAATCCTGTCAGGCGAGAGCTGCCATCATAGGAAGACC
ATGCTACGGGAGGAGGCCGAATACCCGTCACAGTCCGCGGCGGCCTACCT
TCGCCGGGTGCTCAAGTGCTCGCTGATGCTGGCCCTTACGACGCCGCTGC
TGTTCGGCATCATCCTCCACACCCTGGCGATCCTGGGCATTGAGCACGAC
GAGCCATGCTACGGGAGGAGGCCGAATACCCGTCACAGTCCGCGGCGGCC
TACCTTCGCCGGGTGCTCAAGTGCTCGCTGATGCTGGCCCTTACGACGCC
GCTGCTGTTCGGCATCATCCTCCACACCCTGGCGATCCTGGGCATTGAGC
ACGACGAGGTGGTGATGAAGCTCAGCAAGGGCTTCCCAAAGAAAGGGCTA
ATGAGGGCAATCAGACACCGGGCTTCCATCCCCTTGCTGCAGGTGGTGAT
GAAGCTCAGCAAGGGCTTCCCAAAGAAAGGGCTAATGAGGGCAATCAGAC
ACCGGGCTTCCATCCCCTTGCTGCAGATGCTCGCCTGGAGAATATCCCGG
TATCCCACCGGAGGCGTCGAGATCCGTCTGCAGCACTGCAACCGCATGCT
CAGCGTTCTCGAGACCGCCTTGTCGCAGCAGCAGCAACAACAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCGCCCGCCAAGAGCGCTGCCGCTCCGG
GGAGGAGAGGCGGCTCTAGAAGAATCATCGCCGCTTTCTGTCGGGGAGGG
GGGGGGGGAAGAAGGAGGAGGAGGAGCGGGGGTGGGCGACGTTCTGCCCG
GCGTCAAGGCTCACCGGCACACGCTCTGGTTGTACCCTGTGATGGTAGCG
GGGGGTCCCGACCGGGCGAGCTGCGTCGTCAGGGATCTCTTGCGGGAGGG
GTTCGACGCCACTCGAGCGCCGACCTCGCTGATGCCCATCGAGCGATGCT
CGCCTGGAGAATATCCCGGTATCCCACCGGAGGCGTCGAGATCCGTCTGC
AGCACTGCAACCGCATGCTCAGCGTTCTCGAGACCGCCTTGTCGCAGCAG
CAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCCCGCC
AAGAGCGCTGCCGCTCCGGGGAGGAGAGGCGGCTCTAGAAGAATCATCGC
CGCTTTCTGTCGGGGAGGGGGGGGGGGAAGAAGGAGGAGGAGGAGCGGGG
GTGGGCGACGTTCTGCCCGGCGTCAAGGCTCACCGGCACACGCTCTGGTT
GTACCCTGTGATGGTAGCGGGGGGTCCCGACCGGGCGAGCTGCGTCGTCA
GGGATCTCTTGCGGGAGGGGTTCGACGCCACTCGAGCGCCGACCTCGCTG
ATGCCCATCGAGCGGTGCACAACCACCAAGTACAAGGGCCCCCCTGGCGG
CGTGTCGTCGCGGTCGTGTCGCACGCCGAGGTGCTCGGCGATGATGGACT
CGTTGGTTTATCTCCCGCTGGCCAACAACATCCCGGACTCTGAGGTGGAC
AGGTGCACAACCACCAAGTACAAGGGCCCCCCTGGCGGCGTGTCGTCGCG
GTCGTGTCGCACGCCGAGGTGCTCGGCGATGATGGACTCGTTGGTTTATC
TCCCGCTGGCCAACAACATCCCGGACTCTGAGGTGGACAGGATGGCTCTA
GTGCTGGCGAGGTCGTTGTGGTCGTGTGCTTCTTCAGCGGCGCCGGGGGA
CGGCAGACCGGACTCATGCAGCAGTGCCGCCGGCGGGCCGCGCAAGCCGC
GGAACGGTAGCAGGGAGCGCGCCGCGTTAGCCCGAAGCCTGGTGGCCTTC
GCATTTCGCCTGGATGTGATAGCCGTGTCGACGTTGTGCTTGATGGTGTT
GGCGTTTTCCTTGGTGATTCTGGCGTGGTTGCGGTGAGATGGCTCTAGTG
CTGGCGAGGTCGTTGTGGTCGTGTGCTTCTTCAGCGGCGCCGGGGGACGG
CAGACCGGACTCATGCAGCAGTGCCGCCGGCGGGCCGCGCAAGCCGCGGA
ACGGTAGCAGGGAGCGCGCCGCGTTAGCCCGAAGCCTGGTGGCCTTCGCA
TTTCGCCTGGATGTGATAGCCGTGTCGACGTTGTGCTTGATGGTGTTGGC
GTTTTCCTTGGTGATTCTGGCGTGGTTGCGGTGA
back to top