mRNA_E-fasciculatus_F_contig14623.3330.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 1.260e-158 Identity = 219/246 (89.02%), Postives = 228/246 (92.68%), Query Frame = 1
Query: 1 MEFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
MEF+CIDPSA CV+DDD+TVDM ENCGYVSGIGNGWCDR NNKEECGYDGGDCCSCTC+S YDDD EY F C DP+ASCFGEGTTGSDDFSFHDD QPMSYEFL+W+ETE LPTV DAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSC+TSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTL+VHVNGELTHTHESY D TFNTLGVTA
Sbjct: 1 MEFACIDPSAPCVDDDDVTVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPTASCFGEGTTGSDDFSFHDDYQPMSYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTA 245
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 445 bits (1145), Expect = 2.200e-150 Identity = 216/246 (87.80%), Postives = 226/246 (91.87%), Query Frame = 1
Query: 1 MEFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
MEFSCIDPSA CVNDDD+T+DM ENCGYVSGIGNGWCDR NNKEECGYDGGDCCSCTC+S YDDD EY F C DPSASCFGEGTTGSDDFSFHDD QPMSYEF++W+ET+ LPTV DAVEVGTKTEVGVSATAHD+RPGSSG DVGCGEVGGLGCTATNTRDGI SDIESRWSC+TSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTL+VHVNGELTHTHESY D TFNTLGVTA
Sbjct: 462 MEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTGSDDFSFHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTA 706
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 6.070e-139 Identity = 199/246 (80.89%), Postives = 212/246 (86.18%), Query Frame = 1
Query: 1 MEFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
MEF+CIDPSA CV+DDDITVDM ENCGYVSGIGNGWCDR NNKEECGYDGGDCCSCTCES YDDD EY F C DP+ASCFGE TGSDDFS DDQPMSYEF+ W+ETE LPTV AVEVGTKTEVGVS+TAHDVRPG S D GCGEVGGLGCTATNTRDGI S+IESRWSC+T LV DEGPCQIEFTFAEPQ I+DIQVAFW NER TL+VH+NGE+THTHESYAD+TFNTLGVTA
Sbjct: 242 MEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPTGSDDFST--DDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTA 485
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 381 bits (979), Expect = 1.390e-127 Identity = 196/294 (66.67%), Postives = 212/294 (72.11%), Query Frame = 1
Query: 4 EFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDV-------------------------------------------------HVNGELTHTHESYADSTFNTLGVTA 738
EFSCIDP+A CV+DDDITVDMFENCGYVSGIGNGWCDR NNKEECGYDGGDCCSCTC+S YDDD EY F C DP+ASCFGE +TGSDD+S DD+PMSYEF+ W+ETE LPTV AVEVGTKTEVGVSATAHDVR G S DVGCGEVGGLGCTATNTRDGI S+IESRWSC+T LV DEGPCQIEFTFAEPQ I+DIQVAFW NER TL+V H+NGE+THTHESYAD+TFN LGVTA
Sbjct: 143 EFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYST--DDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTA 434
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 380 bits (976), Expect = 1.730e-126 Identity = 194/248 (78.23%), Postives = 206/248 (83.06%), Query Frame = 1
Query: 7 FSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRN--NKEECGYDGGDCCSCTCESDYD-DDDYD-PCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
F+CIDP A CVNDDDITVDMF NC Y IGNGW R GYDGGDCCSCTC++ +D DDDY EYN C DP+ASCFGEGTTGSDDF+FHDD QP SYEF+ W+ETE LPTV DAVEVGTKTEVGVSATAHDVRP SS DDVGCG+VGGLGCTATNTRDGIVSDIESRWSC+T LVPDEG CQIEF+FAEPQN+VDIQVAFW NER TL VHVNGELTHTHESYADSTFNTLGVTA
Sbjct: 334 FACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTTGSDDFTFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTA 581
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 361 bits (927), Expect = 2.740e-123 Identity = 181/248 (72.98%), Postives = 199/248 (80.24%), Query Frame = 1
Query: 1 MEFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTT--GSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
M+FSCIDP+A CVNDDDITVDMF+NCGYVSGIG+GWCD NNKE CGYDGGDCCSCTCES +D DDY E F C DPSA+CFGE T DD + D YEF+ W++TE LPTV DAVEVGTKTEV VSATAHDVR G S +VGCGE GG GC A N RDGI ++IESRWSC+ L+ DEGPCQIEF+FAEPQNIVDIQVAFW NERV TL+V+VNGELTHTHESYADSTFNTLGVTA
Sbjct: 30 MQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWD-DDYTCGEDAFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTA 276
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 364 bits (934), Expect = 9.420e-122 Identity = 179/244 (73.36%), Postives = 199/244 (81.56%), Query Frame = 1
Query: 7 FSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
F+CIDP A CV+DD +TVDM +NC Y+ +GNGWCD NN E C YDGGDCC CTCES ++DD E+ F C DP+ASCFGE TTGSDDFS DDQPMSYEF+ W+ETE LPTV AVEVGTKTEVGVS+TAHDVRPG D GCGEVGGLGCTA NTRDGI S+IESRWSC+T LV DEGPCQIEFTFAEPQ IVDIQVAFW NER TL+V++NGE+THTHESYAD+TFNTLGVTA
Sbjct: 221 FACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTGSDDFST--DDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTA 458
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 373 bits (958), Expect = 7.060e-121 Identity = 195/311 (62.70%), Postives = 211/311 (67.85%), Query Frame = 1
Query: 4 EFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDV------------------------------------------------------------------HVNGELTHTHESYADSTFNTLGVTA 738
EFSCIDP+A CV+DDDITVDMFENCGYVSGIGNGWCDR NNKEECGYDGGDCCSCTC+S YDDD EY F C DP+ASCFGE +TGSDD+S DD+PMSYEF+ W+ETE LPTV AVEVGTKTEVGVSATAHDVR G S DVGCGEVGGLGCTATNTRDGI S+IESRWSC+T LV DEGPCQIEFTFAEPQ I+DIQVAFW NER TL+V H+NGE+THTHESY D+TFN LGVTA
Sbjct: 505 EFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYST--DDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTA 813
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 302 bits (773), Expect = 6.650e-101 Identity = 153/204 (75.00%), Postives = 168/204 (82.35%), Query Frame = 1
Query: 127 KEECGYDGGDCCSCTCESDYDDDDYDPCEYNDFACIDPSASCFGEGTTGSDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLDVHVNGELTHTHESYADSTFNTLGVTA 738
K + YDGGDCC CTCES ++DD E+ F C DP+ASCFGE TTGSDDFS DDQPMSYEF+ W+ETE LPTV AVEVGTKTEVGVS+TAHDVRPG D GCGEVGGLGCTA NTRDGI S+IESRWSC+T LV DEGPCQIEFTFAEPQ IVDIQVAFW NER TL+V++NGE+THTHESYAD+TFNTLGVTA
Sbjct: 10 KTKLSYDGGDCCECTCESAWNDDYTCSSEHGIFNCKDPNASCFGEETTGSDDFST--DDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTA 207
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Match: D7FI78_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI78_ECTSI) HSP 1 Score: 300 bits (768), Expect = 7.310e-100 Identity = 159/235 (67.66%), Postives = 175/235 (74.47%), Query Frame = 1
Query: 52 ITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGGDCCSCTCESDYDDDDYDPCE--YNDFACIDPSASCFGEGTTG-SDDFSFHDDDQPMSYEFLTWDETEILPTVTDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCSTSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTL------------------DVHVNGELTHTH 693
+TVDM ENC + IG+G+C+ + ECGYDGG+CCSCTC+S DD + C Y C DPSASCFGEGTTG SDDF F DDDQ MSY+F+ W+ETE LPTVTDAVE+G +TEV VS TAHD R GSS +VGCGEVGGLGCTATNTRDGIVSDIES WSC+T LVPDEGPC I FTFAEPQNIVDIQVAFWNDNERVSTL VHVNGELTHTH
Sbjct: 23 VTVDMLENCEDAADIGDGYCNEDVDTPECGYDGGNCCSCTCQSAPGDDIFS-CRGGYRSIDCQDPSASCFGEGTTGGSDDFIFGDDDQSMSYQFVNWEETESLPTVTDAVELGAETEVSVSPTAHDGRSGSSSGEVGCGEVGGLGCTATNTRDGIVSDIESTWSCATHLVPDEGPCPIMFTFAEPQNIVDIQVAFWNDNERVSTLGASLEADFDLKRTKTFRPQVHVNGELTHTH 256 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14623.3330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14623.3330.1 >prot_E-fasciculatus_F_contig14623.3330.1 ID=prot_E-fasciculatus_F_contig14623.3330.1|Name=mRNA_E-fasciculatus_F_contig14623.3330.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=246bp MEFSCIDPSATCVNDDDITVDMFENCGYVSGIGNGWCDRRNNKEECGYDGback to top mRNA from alignment at E-fasciculatus_F_contig14623:1081..3270+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14623.3330.1 ID=mRNA_E-fasciculatus_F_contig14623.3330.1|Name=mRNA_E-fasciculatus_F_contig14623.3330.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2190bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14623:1081..3270+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14623:1081..3270+ >mRNA_E-fasciculatus_F_contig14623.3330.1 ID=mRNA_E-fasciculatus_F_contig14623.3330.1|Name=mRNA_E-fasciculatus_F_contig14623.3330.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1476bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14623:1081..3270+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |