mRNA_E-fasciculatus_F_contig146.3310.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig146.3310.1
Unique NamemRNA_E-fasciculatus_F_contig146.3310.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 910 bits (2352), Expect = 0.000e+0
Identity = 446/453 (98.45%), Postives = 450/453 (99.34%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYT+GKEIVD VL+RIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDI RPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS+E+AYHEQLSVAEITNSVFEPAGMMT CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY
Sbjct:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 453          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA)

HSP 1 Score: 853 bits (2205), Expect = 1.420e-307
Identity = 407/453 (89.85%), Postives = 437/453 (96.47%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MREC+SIHIGQAG+QTG ACWEL CLEHGIQPDGQ+P+D+T+G GD+A NTFF+ETGAGKHVPR + VDLEPTV DE+RTG+YR L+HPEQ+ISGKEDAANNYARGHYTVGKEIVD VL+RIRKLADNCTGLQGF++FHATGGGTGSG GSLLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+HALLEHTDCTFCLDNEALYDVCRRNLDI RPTYTNLNRL+AQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIIS+E+AYHEQLSV EITNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED GEEY
Sbjct:    1 MRECVSIHIGQAGVQTGMACWELLCLEHGIQPDGQLPADRTVGSGDEAANTFFTETGAGKHVPRCLMVDLEPTVVDEIRTGSYRHLFHPEQLISGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADNCTGLQGFMIFHATGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVVSSLTASLRFDGALNVDLSEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDMGEEY 453          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A0A455ZC01_9STRA (Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 RepID=A0A455ZC01_9STRA)

HSP 1 Score: 837 bits (2162), Expect = 4.720e-301
Identity = 404/453 (89.18%), Postives = 431/453 (95.14%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRE ISIHIGQAG+Q GNACWEL+CLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPR+V VDLEPTVCDEVRTGTYR LYHPEQII+GKEDAANNYARGHYT+GKEIVD VL+RIRK ADNCTGLQGFL F+A GGGTGSGLGSLLLERLSVDYGRKSKL F + P+PQV+TAVVEPYN VLSTH+LLEHTD    LDNEA+YD+CRR+LDI RPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSVAE+TN+ FEPA MM+KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE +GEEY
Sbjct:    1 MREVISIHIGQAGVQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRSVMVDLEPTVCDEVRTGTYRALYHPEQIITGKEDAANNYARGHYTIGKEIVDLVLDRIRKTADNCTGLQGFLCFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFCVYPSPQVSTAVVEPYNCVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNAAFEPASMMSKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRVDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE-YGEEY 452          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A0A061SEY1_9CHLO (Tubulin alpha chain (Fragment) n=4 Tax=Viridiplantae TaxID=33090 RepID=A0A061SEY1_9CHLO)

HSP 1 Score: 837 bits (2162), Expect = 5.090e-301
Identity = 405/453 (89.40%), Postives = 433/453 (95.58%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRE ISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYT+GKEIVD  L+RIRKL+DNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDI RPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSVAEITNS FEPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE  GEEY
Sbjct:    4 MREVISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE--GEEY 454          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A0A7S1GLI0_CYCTE (Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GLI0_CYCTE)

HSP 1 Score: 836 bits (2160), Expect = 3.430e-300
Identity = 408/453 (90.07%), Postives = 428/453 (94.48%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRECIS+H+GQAGIQ GN CWELYCLEHGI PDG+M SD+T+G  DDAFNTFFSETG+GKHVPRAVYVDLEPTVCDEVR G+YRQLYHPEQII+GKEDAANNYARGHYT GKEIVD VL+RIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNL I RPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS  +A+HEQLSVAEITNSVFEP  MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT+KTKRTIQFVDWCPTGFKCGINYQ PT VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMY KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+T +  GE  DF EEY
Sbjct:   36 MRECISVHLGQAGIQVGNQCWELYCLEHGITPDGKMASDQTVGVADDAFNTFFSETGSGKHVPRAVYVDLEPTVCDEVRHGSYRQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISQAKAHHEQLSVAEITNSVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQAPTPVPGGDLATVKRAVCMVANTTAIAEALSRIDHKFDLMYMKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAQTNDEGGE--DFDEEY 486          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: C1EGH4_MICCC (Tubulin alpha chain n=3 Tax=Mamiellaceae TaxID=41873 RepID=C1EGH4_MICCC)

HSP 1 Score: 831 bits (2147), Expect = 8.050e-299
Identity = 398/449 (88.64%), Postives = 430/449 (95.77%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDF 1347
            MRE ISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYT+GKEIVD  L+RIRKLADNCTGLQGF+VF+A GGGTGSGLGSLLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDI RPTYTNLNRLV QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSVAEITNS +EPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEG+GE+E++
Sbjct:    1 MREVISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVGQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAYEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDGEDEEY 449          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: D8QZI9_SELML (Tubulin alpha chain n=35 Tax=Tracheophyta TaxID=58023 RepID=D8QZI9_SELML)

HSP 1 Score: 831 bits (2146), Expect = 1.230e-298
Identity = 399/453 (88.08%), Postives = 431/453 (95.14%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYT+GKEIVD  L+RIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDI RPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSVAEITN+ FEPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+A+GE EE   GE+Y
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNTAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESADGEDEE--GGEDY 451          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A0A7J6H710_CANSA (Tubulin alpha chain n=10 Tax=Streptophytina TaxID=131221 RepID=A0A7J6H710_CANSA)

HSP 1 Score: 829 bits (2142), Expect = 5.000e-298
Identity = 396/453 (87.42%), Postives = 433/453 (95.58%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRECISIHIGQAGIQ GN+CWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYT+GKEIVD  L+RIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD +  LDNEA+YD+CR++LDI RPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSV+EITNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEG+  ++D GEEY
Sbjct:    1 MRECISIHIGQAGIQVGNSCWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRKSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGD--DDDEGEEY 451          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A0A1U7Z4W7_NELNU (Tubulin alpha chain n=77 Tax=Eukaryota TaxID=2759 RepID=A0A1U7Z4W7_NELNU)

HSP 1 Score: 829 bits (2142), Expect = 5.000e-298
Identity = 397/453 (87.64%), Postives = 431/453 (95.14%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1359
            MRECIS+HIGQAGIQ GNACWELYCLEHGIQPDGQMPS KT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTG YRQL+HPEQ+ISGKEDAANN+ARGHYT+GKEIVD  L+RIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD +  LDNEA+YD+CRR+LDI RPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSVAEITNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+  GEG++ED GEEY
Sbjct:    1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSGKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES--GEGDDEDEGEEY 451          
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Match: A9PL15_GOSHI (Tubulin alpha chain n=3 Tax=Streptophytina TaxID=131221 RepID=A9PL15_GOSHI)

HSP 1 Score: 828 bits (2139), Expect = 1.380e-297
Identity = 395/448 (88.17%), Postives = 428/448 (95.54%), Query Frame = 1
Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 1344
            MRECIS+HIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYT+GKEIVD  L+RIRKLADNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDI RPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+E+AYHEQLSVAEITNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+ EG+ E+ED
Sbjct:    1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGDEEDED 448          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig146.3310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TBA2_PELFA0.000e+098.45Tubulin alpha-2 chain n=45 Tax=cellular organisms ... [more]
A0A7S0Q113_9EUKA1.420e-30789.85Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 ... [more]
A0A455ZC01_9STRA4.720e-30189.18Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 R... [more]
A0A061SEY1_9CHLO5.090e-30189.40Tubulin alpha chain (Fragment) n=4 Tax=Viridiplant... [more]
A0A7S1GLI0_CYCTE3.430e-30090.07Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=... [more]
C1EGH4_MICCC8.050e-29988.64Tubulin alpha chain n=3 Tax=Mamiellaceae TaxID=418... [more]
D8QZI9_SELML1.230e-29888.08Tubulin alpha chain n=35 Tax=Tracheophyta TaxID=58... [more]
A0A7J6H710_CANSA5.000e-29887.42Tubulin alpha chain n=10 Tax=Streptophytina TaxID=... [more]
A0A1U7Z4W7_NELNU5.000e-29887.64Tubulin alpha chain n=77 Tax=Eukaryota TaxID=2759 ... [more]
A9PL15_GOSHI1.380e-29788.17Tubulin alpha chain n=3 Tax=Streptophytina TaxID=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig146contigE-fasciculatus_F_contig146:3115..7049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score912.9
Seed ortholog evalue5.9e-263
Seed eggNOG ortholog2880.D7G923
KEGG koko:K07374
KEGG Pathwayko04145,ko04210,ko04530,ko04540,ko05130,map04145,map04210,map04530,map04540,map05130
EggNOG free text desc.structural constituent of cytoskeleton
EggNOG OGsCOG5023@1,KOG1376@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03036,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionalpha tubulin
Ec32 orthologEc-15_002180.1
Exons4
Model size2147
Cds size1362
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig146.3310.1prot_E-fasciculatus_F_contig146.3310.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig146 3900..7049 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927946.4185762-UTR-E-fasciculatus_F_contig146:3114..38991622927946.4185762-UTR-E-fasciculatus_F_contig146:3114..3899Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig146 3115..3899 -
1695995761.357478-UTR-E-fasciculatus_F_contig146:3114..38991695995761.357478-UTR-E-fasciculatus_F_contig146:3114..3899Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig146 3115..3899 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927946.432835-CDS-E-fasciculatus_F_contig146:3899..41031622927946.432835-CDS-E-fasciculatus_F_contig146:3899..4103Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 3900..4103 -
1695995761.368708-CDS-E-fasciculatus_F_contig146:3899..41031695995761.368708-CDS-E-fasciculatus_F_contig146:3899..4103Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 3900..4103 -
1622927946.4487054-CDS-E-fasciculatus_F_contig146:4394..53831622927946.4487054-CDS-E-fasciculatus_F_contig146:4394..5383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 4395..5383 -
1695995761.3781574-CDS-E-fasciculatus_F_contig146:4394..53831695995761.3781574-CDS-E-fasciculatus_F_contig146:4394..5383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 4395..5383 -
1622927946.4627173-CDS-E-fasciculatus_F_contig146:6555..66751622927946.4627173-CDS-E-fasciculatus_F_contig146:6555..6675Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 6556..6675 -
1695995761.387682-CDS-E-fasciculatus_F_contig146:6555..66751695995761.387682-CDS-E-fasciculatus_F_contig146:6555..6675Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 6556..6675 -
1622927946.4738848-CDS-E-fasciculatus_F_contig146:7000..70491622927946.4738848-CDS-E-fasciculatus_F_contig146:7000..7049Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 7001..7049 -
1695995761.3970149-CDS-E-fasciculatus_F_contig146:7000..70491695995761.3970149-CDS-E-fasciculatus_F_contig146:7000..7049Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig146 7001..7049 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig146.3310.1

>prot_E-fasciculatus_F_contig146.3310.1 ID=prot_E-fasciculatus_F_contig146.3310.1|Name=mRNA_E-fasciculatus_F_contig146.3310.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=454bp
MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFN
TFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAA
NNYARGHYTVGKEIVDRVLERIRKLADNCTGLQGFLVFHATGGGTGSGLG
SLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDC
TFCLDNEALYDVCRRNLDIGRPTYTNLNRLVAQVISSLTASLRFDGALNV
DVTEFQTNLVPYPRIHFMLTSYAPIISSERAYHEQLSVAEITNSVFEPAG
MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTG
FKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFG
EEY*
back to top

mRNA from alignment at E-fasciculatus_F_contig146:3115..7049-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig146.3310.1 ID=mRNA_E-fasciculatus_F_contig146.3310.1|Name=mRNA_E-fasciculatus_F_contig146.3310.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3935bp|location=Sequence derived from alignment at E-fasciculatus_F_contig146:3115..7049- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGTGAGTGCATCTCCATCCACATCGGCCAGGCCGGCATCCAGACCGG TGAGCAAAACGCGATTGGTTTGATTTCAATTCCCCCGTGAAATTTGACTT GATTTGGGATAGGGCGTGTGGTTTCGACCGCGATGCAGTTTGCGGCGTCC ACCGATGATCCGGAAGGATCGGGGCCTAAGGAGTGTCTGTCTCTGATGCC CGTCCACAGCGTTCCAGTAATCCTTTGACACACCCTCTGTGGTTGCTAAG CTGCGCTGTTGTCTGTAGCTCGTCTCTCTTTGTCCAAGAGCCAACCGACC TCCAGTCTAAAATGTCGTCAATTCAAACTTGTCTATTCCCGCCGCGCGCG CCTCACACACGACAACACACACAGGTAACGCGTGCTGGGAGCTCTACTGC CTGGAGCACGGCATCCAGCCCGATGGGCAGATGCCCTCGGACAAGACCAT CGGCGGCGGTGATGACGCCTTCAACACCTTCTTCTCGGAGACTGGTGAGT AAAGCAGGATACATACACGCACCTGTCGTGAGGCTTTCAGAGCGTGCGCA CCACGAGTACGATCAAAAAGTGCAACGGTTTTTGGTTTTTTGTTTTCCGA CCATCTCGGTCGTCCATCCTGAACACCAGAAGATCATCTGTGATTCATGA TCACGCGAACATGAATCGATGCAGCCTTGTGTTTCTCCTCTGATCCCGGA CTGCTTCTATTGTGAAGCAGCTAGCAGTGTCTCGTTGCTGCTATCCAAAC CGTCCGCGGCAGCTGTAGACGTGTGTTGTGTGTTGTGGTCGTGTATCGGC GTCGATCAAACACCGCTATTTAATTTGCTCAGCAAGCCGGCAAACGCAAT GCCATAGTTAGCACATCGGGGATGGATGACCTTGGCAAGTAAGGTGGTCC ATGCCGCCCAACGTGCTGCACATGTATGTCTAGGAGAGCATAGATGTTTG GTGTCAAAGAGTATCCAGCAGCCGGCGCGGGATGAGAAAGAAGGCACGAC CACGCACCCGAACGCTCGGGTACAAAACACCTGCTGTTTATTTCATTTGG ACAGCTGTAGTCGGGAATGCCGCGCGCATCCACGCCATGGATCTGAAACG GCATTTTTGCTTTATCGAACACATGATATCTGCGTATATGGTGGTATAGT CAATACGAGGAGGCGAGCCAGTGTTAATAATACACCTTTGCATAGCGACC AAGGAACGGTGCTAATCTGCAGGCAGTACAGAACGAATGGATGCTTCTGC TGTGTGAAATCAAGCACAGCATCACGGACCTTTTTCTACAAATTGTGATT TTTCGTCGGTGCTCTCGCGATGACGAGTCGTGTATCTTGTGTCTGTCGGA GTCTAAAGACCAATGACGATAAGAATCATGCTGCCTTCCTGCTGAGCGAA AGCCCCGACGAAACACATCTATTTTAGTTCACTAAAATAATCGACCGGTA ACCACACATGCCTCTGCCATGCGCACCCACACACCTCTTGGACCATCACG TTCCCAAGCAAGTCCCCCCGAAAATCAGCCACCTAGTACCTGGTGTAGAC TGTTTCGACAGCCTGAAACGTGAAGACACAGCACTGCGAAATTGTCCTTG TCACCACCATCAATCTGTCTTTGTCTCACGCTTTCACCATCCTCCTTGAA CTCAACCAACGAACAGGTGCGGGCAAGCACGTGCCCCGCGCGGTGTACGT GGACCTGGAGCCCACCGTGTGCGACGAAGTCCGCACCGGCACCTACCGCC AGCTGTACCACCCGGAGCAGATCATCTCGGGCAAGGAGGACGCGGCCAAC AACTACGCCCGCGGCCACTACACGGTCGGCAAGGAGATCGTGGACCGGGT GCTCGAACGCATCCGCAAGCTGGCAGACAACTGCACCGGCCTCCAAGGCT TCCTGGTGTTCCACGCCACCGGCGGCGGGACCGGTTCCGGGCTCGGCTCG CTTCTGCTGGAGCGCCTCTCCGTGGACTACGGCCGGAAGTCCAAGCTGTC CTTCGCCATCACCCCGGCGCCGCAGGTAGCCACGGCGGTTGTCGAGCCCT ACAACTCCGTGCTGTCCACGCACGCTCTGCTGGAGCACACGGACTGCACC TTCTGCCTAGACAACGAGGCGCTGTACGACGTGTGCCGCCGCAATCTGGA CATCGGGCGCCCGACGTACACCAACCTGAACCGGCTCGTGGCTCAGGTGA TCTCGTCCCTGACGGCCTCTCTCCGGTTCGACGGCGCCCTTAACGTGGAC GTGACCGAGTTCCAGACCAACCTGGTGCCCTACCCTCGCATCCACTTCAT GCTTACGTCGTACGCGCCCATCATCTCGTCGGAGAGGGCCTACCACGAGC AGCTGTCGGTGGCAGAGATCACCAACTCGGTGTTCGAGCCGGCCGGCATG ATGACCAAGTGCGACCCCCGCCACGGTAAGTACATGGCGTGCTGCCTCAT GTACCGCGGAGACGTGGTGCCCAAGGACGTGAACGCCGCGGTGGCCACCA TCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCCACCGGCTTC AAGTGCGGCATCAACTACCAGCCCCCGACCGTCGTGCCCGGCGGCGACCT CGCCCGCGTGCAGCGCGCCGTGTGCATGGTGGCCAACACCACCGCCATCG CCGAGGTGTGTACAGTCTAGAGGAGATAAAGATGTTGTTGTGCCTACGTT CTGTACAGATCTCTTTGCCACGTTTTCGGGGGTCAGTACCCAAACAGGTT GATACTAGCTGTTGTTTTGCAGCTGCTTGTTTTTACAGGTGAGGTTGATC TCAGTAATCCACACACATTTATAGGTTCCGTTGTACATGGTTGCGTCTTT CGATAGGCAGTGCTGGGAGCAACAGCATGTCTTGGTTGAACTGACACCCC CCACCATTCCTTCCCCGCGCGCTTTTGCGCTCTCAACGTGATTCAGGCGC TGTCCCGCATCGACCACAAGTTCGACCTCATGTACGCAAAGCGAGCCTTC GTGCACTGGTATGTGGGCGAGGGCATGGAGGAGGGCGAATTCTCAGAGGC GCGCGAGGACCTCGCGGCCTTGGAGAAGGACTACGAAGAGGTCGGCGCGG AGACGGCGGAGGGCGAGGGCGAGGAGGAGGACTTCGGGGAGGAGTACTAA AATTCCCTGCCCTACGGAGGCGAATCAAGACTCGCGGCAATAATGTCGTG CGCTTCGGTTGATCGTTGGTGATAGCCGTCCCTATTTTATCGCGAAACTT CTTCGTTTAACTCACATCTGTCCAGCGCAAGTCAAAAGCCGACAGTGGTG GTACTTGTGCGTGCCTTATTTTCGAATCTGACCTGATATAGGTAGTTTGA TGCGCCGCCCCTGTCCGTCTTTAGTGATATACTGTGACGGTGTTTCTTTG GAGTGGCGGTAGATTCCGGTGTAGACTATGTTTCCTTATTGGGACTTGGG ACCAAGCCGCCGCTCCTCGGCACCAAAGGGGGGAGACACAGAGATTGTCG TTCGTTTGCTGTTGTAGGAAAGAGCGAAGTAGTCTATAGTTTTTGTCGAC GTCTTGGTGTTGGTATGGTATGGTAAGCGACGTTACTTTTTCCCGGCTTT TTTACAGTTTTGGTGCCCCAGCAGCATACCCTGCTCAGGGCGCGTTTCGG GCGACAGAGATCGTAGTGATGGTGTTTTGTACTTTCGGATTCACACTAAA GGGCATCCACACATACGGTGTAGTAAAAAGGCATACAGGGCAAACAAACG GTCTCGGCTCAAGATTTCATATTCTCGGGTGGTGGATGGACCACTTCTTC TCCTCTCCCTCGGTACAATAAGACGTTTGTTTGTAGATCCTGCGGCAGAG TCGAGAGAACCTACTCGTCTCGGCTTGCACCCACAAGCCCTCGATTATAA CAGGGGTTTGAGCCTCATTCATGAAACCACGGCGG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig146:3115..7049-

>mRNA_E-fasciculatus_F_contig146.3310.1 ID=mRNA_E-fasciculatus_F_contig146.3310.1|Name=mRNA_E-fasciculatus_F_contig146.3310.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2724bp|location=Sequence derived from alignment at E-fasciculatus_F_contig146:3115..7049- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGTGAGTGCATCTCCATCCACATCGGCCAGGCCGGCATCCAGACCGA
TGCGTGAGTGCATCTCCATCCACATCGGCCAGGCCGGCATCCAGACCGGT
AACGCGTGCTGGGAGCTCTACTGCCTGGAGCACGGCATCCAGCCCGATGG
GCAGATGCCCTCGGACAAGACCATCGGCGGCGGTGATGACGCCTTCAACA
CCTTCTTCTCGGAGACTGGTAACGCGTGCTGGGAGCTCTACTGCCTGGAG
CACGGCATCCAGCCCGATGGGCAGATGCCCTCGGACAAGACCATCGGCGG
CGGTGATGACGCCTTCAACACCTTCTTCTCGGAGACTGGTGCGGGCAAGC
ACGTGCCCCGCGCGGTGTACGTGGACCTGGAGCCCACCGTGTGCGACGAA
GTCCGCACCGGCACCTACCGCCAGCTGTACCACCCGGAGCAGATCATCTC
GGGCAAGGAGGACGCGGCCAACAACTACGCCCGCGGCCACTACACGGTCG
GCAAGGAGATCGTGGACCGGGTGCTCGAACGCATCCGCAAGCTGGCAGAC
AACTGCACCGGCCTCCAAGGCTTCCTGGTGTTCCACGCCACCGGCGGCGG
GACCGGTTCCGGGCTCGGCTCGCTTCTGCTGGAGCGCCTCTCCGTGGACT
ACGGCCGGAAGTCCAAGCTGTCCTTCGCCATCACCCCGGCGCCGCAGGTA
GCCACGGCGGTTGTCGAGCCCTACAACTCCGTGCTGTCCACGCACGCTCT
GCTGGAGCACACGGACTGCACCTTCTGCCTAGACAACGAGGCGCTGTACG
ACGTGTGCCGCCGCAATCTGGACATCGGGCGCCCGACGTACACCAACCTG
AACCGGCTCGTGGCTCAGGTGATCTCGTCCCTGACGGCCTCTCTCCGGTT
CGACGGCGCCCTTAACGTGGACGTGACCGAGTTCCAGACCAACCTGGTGC
CCTACCCTCGCATCCACTTCATGCTTACGTCGTACGCGCCCATCATCTCG
TCGGAGAGGGCCTACCACGAGCAGCTGTCGGTGGCAGAGATCACCAACTC
GGTGTTCGAGCCGGCCGGCATGATGACCAAGTGCGACCCCCGCCACGGTA
AGTACATGGCGTGCTGCCTCATGTACCGCGGAGACGTGGTGCCCAAGGAC
GTGAACGCCGCGGTGGCCACCATCAAGACCAAGCGCACCATCCAGTTCGT
GGACTGGTGCCCCACCGGCTTCAAGTGCGGCATCAACTACCAGCCCCCGA
CCGTCGTGCCCGGCGGCGACCTCGCCCGCGTGCAGCGCGCCGTGTGCATG
GTGGCCAACACCACCGCCATCGCCGAGGTGCGGGCAAGCACGTGCCCCGC
GCGGTGTACGTGGACCTGGAGCCCACCGTGTGCGACGAAGTCCGCACCGG
CACCTACCGCCAGCTGTACCACCCGGAGCAGATCATCTCGGGCAAGGAGG
ACGCGGCCAACAACTACGCCCGCGGCCACTACACGGTCGGCAAGGAGATC
GTGGACCGGGTGCTCGAACGCATCCGCAAGCTGGCAGACAACTGCACCGG
CCTCCAAGGCTTCCTGGTGTTCCACGCCACCGGCGGCGGGACCGGTTCCG
GGCTCGGCTCGCTTCTGCTGGAGCGCCTCTCCGTGGACTACGGCCGGAAG
TCCAAGCTGTCCTTCGCCATCACCCCGGCGCCGCAGGTAGCCACGGCGGT
TGTCGAGCCCTACAACTCCGTGCTGTCCACGCACGCTCTGCTGGAGCACA
CGGACTGCACCTTCTGCCTAGACAACGAGGCGCTGTACGACGTGTGCCGC
CGCAATCTGGACATCGGGCGCCCGACGTACACCAACCTGAACCGGCTCGT
GGCTCAGGTGATCTCGTCCCTGACGGCCTCTCTCCGGTTCGACGGCGCCC
TTAACGTGGACGTGACCGAGTTCCAGACCAACCTGGTGCCCTACCCTCGC
ATCCACTTCATGCTTACGTCGTACGCGCCCATCATCTCGTCGGAGAGGGC
CTACCACGAGCAGCTGTCGGTGGCAGAGATCACCAACTCGGTGTTCGAGC
CGGCCGGCATGATGACCAAGTGCGACCCCCGCCACGGTAAGTACATGGCG
TGCTGCCTCATGTACCGCGGAGACGTGGTGCCCAAGGACGTGAACGCCGC
GGTGGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCC
CCACCGGCTTCAAGTGCGGCATCAACTACCAGCCCCCGACCGTCGTGCCC
GGCGGCGACCTCGCCCGCGTGCAGCGCGCCGTGTGCATGGTGGCCAACAC
CACCGCCATCGCCGAGGCGCTGTCCCGCATCGACCACAAGTTCGACCTCA
TGTACGCAAAGCGAGCCTTCGTGCACTGGTATGTGGGCGAGGGCATGGAG
GAGGGCGAATTCTCAGAGGCGCGCGAGGACCTCGCGGCCTTGGAGAAGGA
CTACGAAGAGGTCGGCGCGGAGACGGCGGAGGGCGAGGGCGAGGAGGAGG
ACTTCGGGGAGGAGTACTAAGCGCTGTCCCGCATCGACCACAAGTTCGAC
CTCATGTACGCAAAGCGAGCCTTCGTGCACTGGTATGTGGGCGAGGGCAT
GGAGGAGGGCGAATTCTCAGAGGCGCGCGAGGACCTCGCGGCCTTGGAGA
AGGACTACGAAGAGGTCGGCGCGGAGACGGCGGAGGGCGAGGGCGAGGAG
GAGGACTTCGGGGAGGAGTACTAA
back to top