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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1828 |
| Cds size | 1050 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14420.3216.1 >prot_E-fasciculatus_F_contig14420.3216.1 ID=prot_E-fasciculatus_F_contig14420.3216.1|Name=mRNA_E-fasciculatus_F_contig14420.3216.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=350bp
MEQLDLALPLLQFGAAFSDLEINQDGDVEESVEFITCQGFLEGAMKNLFH
CRHGSAGWDAASSFGYFMASPSDEGKRDRADKLVKATAAALSHFGLCQLA
IDKVHPSLAVRKQFSEELRSLLFSILYVNTSFLAPIEQLAVLGQLSPLEA
SIEDLRKICDLQERLRQTNGQISLVLFEAAMSRVRLIAVATGRPDASEAN
GLFVQAAEHYRTRDEQRTRILLELNVKQEEVEGLVHGAGSAPPPAGMHGS
GACAGGGSASRGGPVAAASSGITDLFMEKILVSSLGAIPAAGMHGSGACA
GGASASRGGRVAAASSGITDLFMDKTRVSSLGATTMDDTDVGEGMDETA* back to topmRNA from alignment at E-fasciculatus_F_contig14420:238..2987+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig14420.3216.1 ID=mRNA_E-fasciculatus_F_contig14420.3216.1|Name=mRNA_E-fasciculatus_F_contig14420.3216.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2750bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14420:238..2987+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGAGCACGAGTGCACGGCTTGCAAGAGTACGACGATGGAGCAGCTCGAC
CTGGCCTTGCCTTTGCTCCAGTTTGGTGCAGCGTTTTCAGACCTCGAAAT
AAACCAAGACGGTGACGTAGAGGAGTCGGTGGAGTTCATCACGTGCCAAG
GTTTTCTCGAGGGGGCCATGAAGAACCTATTCCACTGCCGACACGGGAGC
GCGGGTTGGGACGCTGCCTCGAGTTTCGGGTACTTTATGGCCTCCCCCTC
GGACGAGGGAAAAAGGGATAGGGCGGACAAGCTGGTGAAGGCCACAGCAG
CAGCTTTGTCCCACTTTGGCCTGTGTCAACTGGCCATCGACAAGGTTCAC
CCATCCCTGGCTGTCCGCAAGCAGTTCTCCGAGGAGCTCAGATCTCTCCT
GTTCTCCATACTCTATGTGAATACCTCGTTCCTGGCGCCGATCGAACAAC
TAGCGGTCCTCGGCCAACTCTCCCCACTGGAGGCTTCTATCGAGGTAATA
CTTGAATATGGTTGCAGACTATAGGTACGAAGAAAATAAACCGTTGCACA
GCATCATGTCGTTCGGTGAAACCCCTCAAGGCACTCCTACTGCAGTAAGC
ACGCTGTTAGCAGCTCCATATAAAATGCATATTAATGGTCTAGACAACTG
CTGCTGTAGTCTACATAATTGCAGATTATAGTTGTAGAAGTACTTCGGGG
TGCTCCTGAGTTGTCGACACACACATATTTATTGGACTCATTCGAGTGAA
ATCCCACATCTCCTTTGCGCTCCGAAGGGCCTGCGTAGCTTCGCAAGACG
ATTGCCCCGCCTGTGTCCTCGTGTCGAAGTCCGCGCCAACTACATAGTCT
CACTTTTATCAACAACGTTCAATGTTACTGCTGTAGTCGACTATGAAGTG
GTTCCCATCTGGGGGCAAGTACAAGTAGGGTTGTCCGTTGACGTGTCGGC
GAACACACATGGTCAGCGTGTGGCGAACACACATGGTCAGCATGTGGTAC
CCGAGTGATGACGAGGAAACGGTGTTGAATAACGCAGACATCCCTCACCC
ACGCCTAGCGGCCGGGGCTACCTCAATGCAACAACTCCAACAGCAACGTA
GCTAGGAGGGTAGGTGGTGCGGACAAAAGTGATGTTTCTTGTTCGACATG
CTACCCTCCTAGCTCCACCTTGGTTTATTGCATACTGGATATCGGTCGCT
CCTGTTTCTTGTTAGGGCGTTTCTAATCATGTTGTGCGAAGGTAAGTCGT
GCTTCGTGGTCCTCACTTCATTCAGAAACGTTTGAACCTATCTACCTCTA
CGTAGCACTACAAGTTCACAGGTTCTTCGATTAGACTATGTTTCTTCTCG
ACAAACACTCTTTACCGGAATCATTATTTTTTTGCTCATCTACATATCGA
CTACTACTTATGTCAGGACTTGAGGAAAATCTGCGACCTACAAGAGAGAC
TGCGCCAGACCAACGGGCAAATATCGCTGGTGCTGTTCGAAGCAGCCATG
AGCCGGGTTCGCCTGATCGCCGTGGCCACGGGCCGCCCCGATGCTTCGGA
GGCCAACGGCCTTTTCGTGCAGGCTGCTGAGCACTATCGTACACGGGACG
AACAACGGACGAGGATCCTCCTCGAACTAAACGTTAAGCAGGAGGAAGTT
GAAGGCCTGGTCCATGGCGCGGGGTCAGCCCCCCCTCCCGCCGGCATGCA
TGGAAGCGGAGCCTGTGCGGGTGGCGGGTCTGCAAGTCGTGGTGGTCCTG
TAGCTGCCGCCAGCAGCGGCATCACGGACCTCTTCATGGAGAAAATACTG
GTATCCAGCCTTGGTGCCATCCCTGCCGCCGGTATGCATGGAAGCGGAGC
CTGTGCGGGTGGCGCGTCTGCAAGTCGTGGTGGCCGTGTAGCTGCCGCCA
GCAGCGGCATCACGGACCTCTTCATGGACAAAACACGGGTCTCCAGCCTT
GGCGCAACTACGATGGACGACACTGACGTCGGGGAGGGGATGGACGAAAC
GGCTTGACGTATGTATATAGACCATCCCTCATCCAGGCGAAGTCCGGCAG
GTTCAAGCTGGCCACCTGTCGACGCTTGTCTTCACTTCAATAGCCCTCTC
GACATACTTTATGTTCTTTGTGATCTCTCCGGCTGTCGTTGTTGGGGAAA
ATCCAGTTTCAAGGGAACGGACTGTGCGATGTCGATTGCCGTGTTGCTTA
TAAAGAACTCATTTAACAATTTACTACGGCAGTCTCAGGTTCTTGCAGAT
CGGGTAAGCAAGATCGAAGATGCAGCCGTTTCGGGTACGAAAACCGCTAC
AATATGTTAGCCCGGGGGTAGCCCCGCCTCACCTCAAGTCTAAGGCAAGG
GAGCAAAAGCTTTAAAAAAAAAGCTTAGGGTGAGTAGGGGCTAGGGGCGT
GGCCAGGGCAAGAGGCAGAACGTATGTTGTTCGTCCGGAGCACGGCGCGA
ATTGCCTCCACACGCGAAACCCCGCTCGTTCGGCCTGCTGCGTTGAGAGC
GAGGGGTGTCTCCGTCTCGGTCTCACACTCTACGGACAGAGAATGGTCTA
GGGACACCTCTGAAACGCAACCGGGTGTCGGACTTTTGAAAATGTCCTGC
GGGAAGGTAGCCCGAGGGAGATGTTGGCGTTGTTTCTATTATATTAGACT
ATACAACTTATTTGTCCCCATTGGTTTTCCGGGCAGTCGGTGCAGCGAGT
TTGAACCAAGCGGAACTCACGAAAAAGAAAGCGAGAAAGATGGACCTGCC
back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig14420:238..2987+ >mRNA_E-fasciculatus_F_contig14420.3216.1 ID=mRNA_E-fasciculatus_F_contig14420.3216.1|Name=mRNA_E-fasciculatus_F_contig14420.3216.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2100bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14420:238..2987+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAGCAGCTCGACCTGGCCTTGCCTTTGCTCCAGTTTGGTGCAGCGTT
TTCAGACCTCGAAATAAACCAAGACGGTGACGTAGAGGAGTCGGTGGAGT
TCATCACGTGCCAAGGTTTTCTCGAGGGGGCCATGAAGAACCTATTCCAC
TGCCGACACGGGAGCGCGGGTTGGGACGCTGCCTCGAGTTTCGGGTACTT
TATGGCCTCCCCCTCGGACGAGGGAAAAAGGGATAGGGCGGACAAGCTGG
TGAAGGCCACAGCAGCAGCTTTGTCCCACTTTGGCCTGTGTCAACTGGCC
ATCGACAAGGTTCACCCATCCCTGGCTGTCCGCAAGCAGTTCTCCGAGGA
GCTCAGATCTCTCCTGTTCTCCATACTCTATGTGAATACCTCGTTCCTGG
CGCCGATCGAACAACTAGCGGTCCTCGGCCAACTCTCCCCACTGGAGGCT
TCTATCGAGATGGAGCAGCTCGACCTGGCCTTGCCTTTGCTCCAGTTTGG
TGCAGCGTTTTCAGACCTCGAAATAAACCAAGACGGTGACGTAGAGGAGT
CGGTGGAGTTCATCACGTGCCAAGGTTTTCTCGAGGGGGCCATGAAGAAC
CTATTCCACTGCCGACACGGGAGCGCGGGTTGGGACGCTGCCTCGAGTTT
CGGGTACTTTATGGCCTCCCCCTCGGACGAGGGAAAAAGGGATAGGGCGG
ACAAGCTGGTGAAGGCCACAGCAGCAGCTTTGTCCCACTTTGGCCTGTGT
CAACTGGCCATCGACAAGGTTCACCCATCCCTGGCTGTCCGCAAGCAGTT
CTCCGAGGAGCTCAGATCTCTCCTGTTCTCCATACTCTATGTGAATACCT
CGTTCCTGGCGCCGATCGAACAACTAGCGGTCCTCGGCCAACTCTCCCCA
CTGGAGGCTTCTATCGAGGACTTGAGGAAAATCTGCGACCTACAAGAGAG
ACTGCGCCAGACCAACGGGCAAATATCGCTGGTGCTGTTCGAAGCAGCCA
TGAGCCGGGTTCGCCTGATCGCCGTGGCCACGGGCCGCCCCGATGCTTCG
GAGGCCAACGGCCTTTTCGTGCAGGCTGCTGAGCACTATCGTACACGGGA
CGAACAACGGACGAGGATCCTCCTCGAACTAAACGTTAAGCAGGAGGAAG
TTGAAGGCCTGGTCCATGGCGCGGGGTCAGCCCCCCCTCCCGCCGGCATG
CATGGAAGCGGAGCCTGTGCGGGTGGCGGGTCTGCAAGTCGTGGTGGTCC
TGTAGCTGCCGCCAGCAGCGGCATCACGGACCTCTTCATGGAGAAAATAC
TGGTATCCAGCCTTGGTGCCATCCCTGCCGCCGGTATGCATGGAAGCGGA
GCCTGTGCGGGTGGCGCGTCTGCAAGTCGTGGTGGCCGTGTAGCTGCCGC
CAGCAGCGGCATCACGGACCTCTTCATGGACAAAACACGGGTCTCCAGCC
TTGGCGCAACTACGATGGACGACACTGACGTCGGGGAGGGGATGGACGAA
ACGGCTTGAGACTTGAGGAAAATCTGCGACCTACAAGAGAGACTGCGCCA
GACCAACGGGCAAATATCGCTGGTGCTGTTCGAAGCAGCCATGAGCCGGG
TTCGCCTGATCGCCGTGGCCACGGGCCGCCCCGATGCTTCGGAGGCCAAC
GGCCTTTTCGTGCAGGCTGCTGAGCACTATCGTACACGGGACGAACAACG
GACGAGGATCCTCCTCGAACTAAACGTTAAGCAGGAGGAAGTTGAAGGCC
TGGTCCATGGCGCGGGGTCAGCCCCCCCTCCCGCCGGCATGCATGGAAGC
GGAGCCTGTGCGGGTGGCGGGTCTGCAAGTCGTGGTGGTCCTGTAGCTGC
CGCCAGCAGCGGCATCACGGACCTCTTCATGGAGAAAATACTGGTATCCA
GCCTTGGTGCCATCCCTGCCGCCGGTATGCATGGAAGCGGAGCCTGTGCG
GGTGGCGCGTCTGCAAGTCGTGGTGGCCGTGTAGCTGCCGCCAGCAGCGG
CATCACGGACCTCTTCATGGACAAAACACGGGTCTCCAGCCTTGGCGCAA
CTACGATGGACGACACTGACGTCGGGGAGGGGATGGACGAAACGGCTTGA back to top
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