mRNA_E-fasciculatus_F_contig1438.3187.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1438.3187.1 vs. uniprot
Match: D8LKZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ1_ECTSI) HSP 1 Score: 707 bits (1824), Expect = 1.280e-251 Identity = 365/421 (86.70%), Postives = 376/421 (89.31%), Query Frame = 1
Query: 1 MLQRLGLTKTSVNGTTANGTTDGTHXXXTTEASKREVVSVPRVEEFEHARFLKVVCRERVAVRASPSQPAPENGQSFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHPSGARFAKIPSLLPQAPRHTIAVPQNTVVHACRRHTPPGSSVTFVELSDSKGWIVESTKDKAVLEQSSDGQYMVENITGHYRDDSEAWYEVVSETGVELLEAPDADSMRMLELFLPGKAFCVSERFQPPEQGSAFLKVKGREAWVVQRAASDAEEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSSEYGETVDVYGSSSDDSDGDNEDEIEQARRAARRHCGWVPSTSNGEEVVVE 1263
MLQRLGLTK SVNG ANGT +G + +KREVVSVP VEEFE ARFLK SFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHP+GARFAKIPSLLPQ PRHTIAVPQNTVVHACRRHTPPGSSVTFVELSD+KGWIVESTK+KAVLEQSSDG+YMVENITGHYRDDSEAWY+VV E+GVELLEAPDA S RMLELFLPGKAFCVSERFQPPEQGS FLKVKGREAWVVQRA SD EEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSSEYGETVDVYGSSSDDSD DNEDE+EQARR ARRHCGWVPSTSNGEEVVV+
Sbjct: 34 MLQRLGLTKASVNG--ANGT-EGANGE-----AKREVVSVPPVEEFEQARFLK----------------------SFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHPAGARFAKIPSLLPQTPRHTIAVPQNTVVHACRRHTPPGSSVTFVELSDNKGWIVESTKEKAVLEQSSDGKYMVENITGHYRDDSEAWYQVVDESGVELLEAPDAGSTRMLELFLPGKAFCVSERFQPPEQGSTFLKVKGREAWVVQRAESDGEEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSSEYGETVDVYGSSSDDSDWDNEDELEQARRGARRHCGWVPSTSNGEEVVVD 424
BLAST of mRNA_E-fasciculatus_F_contig1438.3187.1 vs. uniprot
Match: A0A7S2UXS7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS7_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 6.600e-8 Identity = 83/317 (26.18%), Postives = 142/317 (44.79%), Query Frame = 1
Query: 151 FLKVVCRERVAVRASPSQPAPENGQSFGFGDVVEVRGLAVAVPEGVVV----ELKQP--QSGFVFQK----HGDRTLLEEVEAL------KVEEGDWWYRVVHPSGARFAKIPSLLPQAPRHTIAVPQNTVVHACRRHTP-PGSSVTFVELSDSKGWIVES-------------TKDKAVLEQSSDGQYM--VENITGH--YRDDSEA--WYEVVSETGVELLEAPD--ADSMR-MLELFLPGKAFCVSERFQPPEQGSAFLKVKGREAWVVQRAASDAEEACKKLPPPMDEAVEQW---YRVQYPGGVRLRASPAF 975
F +VV + VAVR +P + G +G+VVE+ + + + P + G+VF++ + + + +EEV+AL KV++ D++YRV+H GA+ A + + + RH +P TVV A RR P S + ++ +G+I+E+ + D A E S G+ + +E ++D+E +++VV E GV + + A S R +L+ + C+ P +F + WV R +++P +AVE YRV Y GGV +R P F
Sbjct: 22 FYRVVHPKGVAVRETPDVEGRKTGTCLFYGEVVEISQKVKLLDDDTTYLRMDHFRDPWMRKGWVFERVRALNPETSRMEEVQALEPMKPPKVQQDDFFYRVIHQDGAQLA-VKARMDSELRHE-RLPFGTVVEASRRVKPFEASDILYLRPDSHEGFILETPGGEMLLKAPPPASVDPAAEEASQRGEMLPTLERFEPQPAEQEDNEGTFFFQVVCEPGVFVRKEAKLCAQSTRTLLKAETTFTSTCLRTLKYPGLGEVSFARCDAARGWV--RIQKHKIPIIREVP----DAVENGPFNYRVVYEGGVSVRTEPRF 330 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1438.3187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1438.3187.1 >prot_E-fasciculatus_F_contig1438.3187.1 ID=prot_E-fasciculatus_F_contig1438.3187.1|Name=mRNA_E-fasciculatus_F_contig1438.3187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=442bp MLQRLGLTKTSVNGTTANGTTDGTHVNGTTEASKREVVSVPRVEEFEHARback to top mRNA from alignment at E-fasciculatus_F_contig1438:10933..17000+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1438.3187.1 ID=mRNA_E-fasciculatus_F_contig1438.3187.1|Name=mRNA_E-fasciculatus_F_contig1438.3187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6068bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1438:10933..17000+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1438:10933..17000+ >mRNA_E-fasciculatus_F_contig1438.3187.1 ID=mRNA_E-fasciculatus_F_contig1438.3187.1|Name=mRNA_E-fasciculatus_F_contig1438.3187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2652bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1438:10933..17000+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |