mRNA_E-fasciculatus_F_contig1438.3186.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1438.3186.1
Unique NamemRNA_E-fasciculatus_F_contig1438.3186.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1438.3186.1 vs. uniprot
Match: A0A6H5L718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L718_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 1.590e-183
Identity = 331/421 (78.62%), Postives = 339/421 (80.52%), Query Frame = 2
Query:  329 MFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPNRGHGAAAAVXXXXXXXAASEVDPGYTNHPDDEKGNRGPSKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREFFSAKLRNIGLDPTEVAEWDAALVAAQHHADLAPRERDPPHSAASAAVPLSLAHHSSPHCHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESGQGQSLYXXXXXXXXXXXXXXXXXXPGSAFIIRKKPGRKPGKMNKASFNSPEAKRARVLDSMVSAAERSNLLQEAGAEHMRRLELADAE-RLAMEKEEHALRMAIGKSALALLSKMAGEPPPQLSXXXXXXXXXXXXXPMHEPGSVG 1588
            MFMCKT FNTVPLSTREGWKQYRGTRTFPESRIAASCRPGP RGHGAA     XXXXX  SEVDPG+TNHPDDEKGNRGP+ SALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLR+QGHPEMA ILDNTTEGARKVI SRVLAKYLKNRE FSAKLRNIGLDPTE+AEWD ALVAAQHHADLAPRERD PHS    AVPLSL HHSSPHCHQ       XXXXXXXXXXXXXXXXXX                    S                         PG+ FIIRKKPGRK GK+NK+SFNSPEAKRARVLDS+VSAAERS LLQEAGAEHMRRL LADAE RL MEKEEHALRMAIGKSALALLSKMAGEPPPQLS XXXXXXXXXXX   HEPGSVG
Sbjct:    1 MFMCKTRFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGHGAA-----XXXXXXXSEVDPGHTNHPDDEKGNRGPTNSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLRDQGHPEMATILDNTTEGARKVIRSRVLAKYLKNREVFSAKLRNIGLDPTEIAEWDVALVAAQHHADLAPRERDQPHS----AVPLSLPHHSSPHCHQQQEGDAGXXXXXXXXXXXXXXXXXXQRWHPRPLHQVPPPQKASRGS------------PCITIAAGRQRRHPGARFIIRKKPGRKLGKLNKSSFNSPEAKRARVLDSIVSAAERSILLQEAGAEHMRRLVLADAEQRLTMEKEEHALRMAIGKSALALLSKMAGEPPPQLSPXXXXXXXXXXX--THEPGSVG 398          
BLAST of mRNA_E-fasciculatus_F_contig1438.3186.1 vs. uniprot
Match: D8LKZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ0_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 5.350e-160
Identity = 236/257 (91.83%), Postives = 241/257 (93.77%), Query Frame = 2
Query:  242 LPECYPWCSVAGCTERPLRQYTATTSRQIMFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPNRGHGAAAAVXXXXXXXAASEVDPGYTNHPDDEKGNRGPSKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREFFSAKLRNIGLDPTEVAEWDAALVAAQHHADLAPRERDPPHSAASAAVPLSLAHHSSPHCHQ 1012
            +PECYPWCSVAGCTERPLRQYTA +S+QIMFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGP RG GAA   XXXXXXX  SEVDPGYTNHPDDEKGNRGP+KSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNRE FSAKLRNIGLDPTE+AEWDAALVAAQHHADLAPRERD PHS    AVPLSL HHSS HCHQ
Sbjct:    1 MPECYPWCSVAGCTERPLRQYTAASSKQIMFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGLGAA--XXXXXXXXXXSEVDPGYTNHPDDEKGNRGPTKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREIFSAKLRNIGLDPTEIAEWDAALVAAQHHADLAPRERDQPHS----AVPLSLPHHSSHHCHQ 251          
BLAST of mRNA_E-fasciculatus_F_contig1438.3186.1 vs. uniprot
Match: D8LKY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY9_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 6.400e-41
Identity = 97/104 (93.27%), Postives = 98/104 (94.23%), Query Frame = 2
Query: 1277 MNKASFNSPEAKRARVLDSMVSAAERSNLLQEAGAEHMRRLELADAERLAMEKEEHALRMAIGKSALALLSKMAGEPPPQLSXXXXXXXXXXXXXPMHEPGSVG 1588
            MNK+ FNSPEAKRARVLDSMVSAAERSNLLQEAGAEHMRRLELADAERLAMEKEEHALRMAIGKSALALLSKMAGEPPPQLS  XXXXXXXXXX   HEPGSVG
Sbjct:    1 MNKSYFNSPEAKRARVLDSMVSAAERSNLLQEAGAEHMRRLELADAERLAMEKEEHALRMAIGKSALALLSKMAGEPPPQLSPPXXXXXXXXXX--THEPGSVG 102          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1438.3186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L718_9PHAE1.590e-18378.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKZ0_ECTSI5.350e-16091.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKY9_ECTSI6.400e-4193.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1438contigE-fasciculatus_F_contig1438:6283..10749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1613
Cds size1482
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927926.713089-UTR-E-fasciculatus_F_contig1438:6282..63041622927926.713089-UTR-E-fasciculatus_F_contig1438:6282..6304Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1438 6283..6304 -
1695995753.8284132-UTR-E-fasciculatus_F_contig1438:6282..63041695995753.8284132-UTR-E-fasciculatus_F_contig1438:6282..6304Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1438 6283..6304 -
1622927926.8063374-UTR-E-fasciculatus_F_contig1438:10640..107491622927926.8063374-UTR-E-fasciculatus_F_contig1438:10640..10749Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1438 10641..10749 -
1695995753.8877716-UTR-E-fasciculatus_F_contig1438:10640..107491695995753.8877716-UTR-E-fasciculatus_F_contig1438:10640..10749Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1438 10641..10749 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927926.7300165-CDS-E-fasciculatus_F_contig1438:6304..64781622927926.7300165-CDS-E-fasciculatus_F_contig1438:6304..6478Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 6305..6478 -
1695995753.839015-CDS-E-fasciculatus_F_contig1438:6304..64781695995753.839015-CDS-E-fasciculatus_F_contig1438:6304..6478Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 6305..6478 -
1622927926.7476382-CDS-E-fasciculatus_F_contig1438:6715..73511622927926.7476382-CDS-E-fasciculatus_F_contig1438:6715..7351Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 6716..7351 -
1695995753.851123-CDS-E-fasciculatus_F_contig1438:6715..73511695995753.851123-CDS-E-fasciculatus_F_contig1438:6715..7351Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 6716..7351 -
1622927926.763891-CDS-E-fasciculatus_F_contig1438:7986..81511622927926.763891-CDS-E-fasciculatus_F_contig1438:7986..8151Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 7987..8151 -
1695995753.8595939-CDS-E-fasciculatus_F_contig1438:7986..81511695995753.8595939-CDS-E-fasciculatus_F_contig1438:7986..8151Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 7987..8151 -
1622927926.7792706-CDS-E-fasciculatus_F_contig1438:9006..92971622927926.7792706-CDS-E-fasciculatus_F_contig1438:9006..9297Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 9007..9297 -
1695995753.8678527-CDS-E-fasciculatus_F_contig1438:9006..92971695995753.8678527-CDS-E-fasciculatus_F_contig1438:9006..9297Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 9007..9297 -
1622927926.7904162-CDS-E-fasciculatus_F_contig1438:10424..106401622927926.7904162-CDS-E-fasciculatus_F_contig1438:10424..10640Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 10425..10640 -
1695995753.877641-CDS-E-fasciculatus_F_contig1438:10424..106401695995753.877641-CDS-E-fasciculatus_F_contig1438:10424..10640Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1438 10425..10640 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1438.3186.1prot_E-fasciculatus_F_contig1438.3186.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1438 6305..10640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1438.3186.1

>prot_E-fasciculatus_F_contig1438.3186.1 ID=prot_E-fasciculatus_F_contig1438.3186.1|Name=mRNA_E-fasciculatus_F_contig1438.3186.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=494bp
MMAHQLGSPLPGASPHPPQQQYHSSGSSSVHDMHHQHQHHNNASLPECYP
WCSVAGCTERPLRQYTATTSRQIMFMCKTHFNTVPLSTREGWKQYRGTRT
FPESRIAASCRPGPNRGHGAAAAVAAATAATAASEVDPGYTNHPDDEKGN
RGPSKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAA
NVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREFFSAKLRNIGL
DPTEVAEWDAALVAAQHHADLAPRERDPPHSAASAAVPLSLAHHSSPHCH
QQQEDDAGGDLGGGAAAIAAAAAAAAAAAAAAATSPAAAPGASPAESGQG
QSLYNNGGGAAAAAAAAAAAAAPGSAFIIRKKPGRKPGKMNKASFNSPEA
KRARVLDSMVSAAERSNLLQEAGAEHMRRLELADAERLAMEKEEHALRMA
IGKSALALLSKMAGEPPPQLSPPLAAAPPAPSPPPMHEPGSVG*
back to top

mRNA from alignment at E-fasciculatus_F_contig1438:6283..10749-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1438.3186.1 ID=mRNA_E-fasciculatus_F_contig1438.3186.1|Name=mRNA_E-fasciculatus_F_contig1438.3186.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4467bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1438:6283..10749- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACACCCCGTACCCCGACGCAAGACAGCAGGTAAGCCTAGCCTGCTCACG GATCATCACCGGATCGAGCACCGCGCCGTGTCAGGGCTGCGTGTTTTTAG GGCGCCCGCATGATGGCCCACCAGCTGGGATCGCCGCTCCCTGGGGCCTC GCCTCACCCGCCACAGCAGCAGTACCACAGCAGCGGCAGCAGCAGCGTCC ACGACATGCACCATCAACATCAGCACCACAACAATGCGAGCTTGCCGGAG TGCTACCCATGGTGCTCTGTCGCGGGGTGCACGGAGCGGCCGCTGCGGCA ATACACGGCGACTACGAGCAGGCAGGTGCGACTTCGCCGAGGGTTTGACC ACCTGTTGGTGTAGCGAGAAGCGAGATGCTACCGGCCTACTCTGTACAAG TAGTATTCTTTTTTTTTTTTTGGGTGCATACCGTCTTGTAGTCTACTAAA ATTACTGGCAGGTGCATATCGTCTGTACTATAGTCTACCAAAATTGCAAA ATTGCTCGCAGACGCTGCTGCACACAAGCCGTTGGCGTGTTTTCTCATTT TCACGGCAGTAGTAAACCCTATGGCAAGCCGCTATTCCACCATTAGTTTA TCTCGCGCCCCCCCCTCTCTTGTCTGCCATGCGTCGGGATGGTGTGTAAA ACATTGGTAAACAACTCTTAACTTTGAGCATCTTACTAAAGCAAATGTGG GTCCTCTGCATTGTACAGAATGAATCTCGCGCGTTTGTCGTTCCCACGGA TGTATGCCATGCTAGACTATGTAGACTAGACCATGCTTTGGCGCCAGTGC GACCTTTCGGCGAACAATGAACGAAGGATGGAAGCTGCAAGACTAGACTA GACTAGACTTTGGTTGACGCACCAGCCGGGGTGCCACTCACGAGGAATAG GAATAGTCTATGCATTAAGTATGCGTAGGAGTGTAAACTAAACGCTGGAA CTCAGTCGTCCTCGCATCGAAAGTCCTCGTTGCTATGCATATCCTATTAA TAGGAGTATACTGCATGCTGTTGTCGTTGACTCCGGCAGCCTCCTTGTAC TGTAGGACCACATTCTTCATGCGTCACGTGTGTTGCACTCTCTCAAGGGC ATCGTTGAATGTCTAATAGGGAGGAGAAACACAAGCATATGTGGGAGTCG AGAGGGACTGCCCAAGGCAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGCAGTACCAACAATGACGGGGCCGAAAACGACCAAGGCCATACAAG TATGTTATGCCGGGTAAGGCCGCGTGTTCCAACAAGAGAAGTTTGCTTAT GCATTATGCACAACATTTATTTTTGTTTTGATTCTCTTGACGCTCTCTTT CGCTCACTGCTGTCGTTGTCTGTCCAACAACGCCAACACCCCCCCATCGT GTACCGTGTACCGTGTACCGTACCATCCTCTGGGTGCATGTGCATGCTGC AGATCATGTTCATGTGCAAGACGCACTTCAACACCGTGCCCCTCAGCACC CGCGAGGGCTGGAAGCAGTACCGGGGCACCCGCACCTTCCCGGAGAGCAG GATCGCCGCCTCGTGCAGGCCGGGCCCGAACAGGGGTCACGGTGCCGCGG CGGCGGTGGCTGCAGCAACGGCGGCGACAGCGGCGAGCGAGGTGGACCCG GGGTACACGAACCACCCCGACGACGAAAAGGGCAACAGAGGCCCGTCCAA GAGCGCACTGTGGCCGGGGAAGGTCTACAACGTCCTGTATCAGGTAAGTA GGTAGGTAGATAGGTGTGCTAAATAGGGTGCAGGTTGGGTTGAGTTGATT TGCATCCCCCCTTCAGGTGCAGGTTGCCGTTGCGGGGTTAACTTGAGTTG CACCCCTCCTTAGGGTGCAGATGACCGCGGCAGCGTTGAGTTTAGTTGCA TTTTAAACAAAATCCCCTTCTCGTTAGGGAGCAGCCTGTTTTTGAAAGCC TGTCGGCAAGGCGCGCGGTTCGGGTTTTTTGGAGAAATAGACACGACAAC ACGTCAATATTGGAGAGATTCTGTCGTAGAACACAAATAAAAAAAAAATG GTGCTTTCACTTGTCGGATGGTTGAAACATCAAAGGTAAAGGTTGTTGGT TCACGACAAATGTCAGGGAGATGGATGGCACAGCTTTCACGTTTGGCGGT TTCGTACCTTCCGCCTCCCGGGCGTCGGGAAACCCCCATCTGCGACTGAC GAAGGTATTCCCCCGCCGACACCCTGTGTCACGTGATATCACACCCTTAT AGCTCGATACTGTACATGTATCTCCACAGAAGAGGAGCAACGGATTTAGG TAAAAGGAGCAGCATTGGAAAGATGGAGATACATGTTTCGTCGGCAGTTT CCAAAAGACACAAGGTTTGGTATCGGTAACGCCTTGGTTGTTGAAGCACT GATAGATAGAAGCCAGGGAGATCGATTCTGGCCACGCGGCATGCCATGCG ACTGGCGGTATACATCACACCGGCTAGCACGCCTACAAGTCGAGTGAGGG GGGAGGGGAGTATGCCAGAGCAGATAACGAAACCTCCCGAATCGAACAAA AAACGCCTTAGTAGATGGTGCTGAAACGGCCGCACTGCGAACAAACAGGT GTGGAACGCTCAGGCGGAGCAAAAGAAGATCAGCTCAGGAGACGGTTACA TGACGTCATCGGACCGGGCGGCGCTTGTTCCGCAGGCGGCGAACGTTCTT CGGGAACAGGGGCACCCTGAGATGGCCATCATCCTGGACAACACCACGGA AGGGGCTCGCAAGGTCAGTCAGGGAGAGGGAGCAGGATATCTCGCGTTTG TTTCTATGGCGCTACTTTTGACCTGCCTCGAGCAGACCTTTGAGGACTTC TAAGATGAGATGTCAAAGCTAGCCTCAAGCACGCTACTGAACGAGACGTG AAGAGTAGTAACGTTGAAGGAGGAAGGGTGCTCTTGCAGACAGCAGCGGT TCCAACATGCTGCTGAACGGAATCGCCCTTCTTGACATGTTTGGGTCACC TGCAGAAGCGATGCGGGCACCGCCCTCTGACCGTGCCATGTGCGTGGCGG CGACTACAACACTAACGCTTTGCCATAGATCAATCGCAATCGGTTGCGAG CTCTCACATTCAACTTGTGTACATTGTATCGCGCTCTCACGAGGCAGGCC CAGTGTGCTGTGCTGGCAAGACACTTGGAGGATAAAGAACGAAGTATGGC CTAGCCTTTGTCTGATTAATCCACAGCCACTTCTCCGTCGGCCAACATAC AAGACAAAACTCTAGTTCCACGGGTTTCATCTCTTTCGCAAACATTGTAG ACGTGATTTGACGAGACACTCACCGTTGCGTCTACGTGCACTGCCGCGTA CAAATATCCTGGCATTGACGCCGTCTGCTGCTCCCTCGGCTGCTCCAGGT TATTCACAGCCGGGTGTTGGCCAAGTACCTCAAGAACCGCGAATTCTTCT CCGCCAAGCTCAGAAACATCGGCCTGGACCCGACCGAGGTAGCCGAGTGG GATGCGGCCCTTGTCGCCGCGCAACACCACGCCGACCTCGCACCAAGAGA GCGAGACCCACCGCACTCAGCAGCATCAGCGGCAGTGCCGCTCTCTCTTG CTCATCACTCCTCCCCGCACTGCCATCAACAGCAAGAAGACGACGCGGGG GGTGATCTCGGGGGGGGAGCAGCGGCAATCGCCGCGGCAGCGGCGGCGGC GGCAGCGGCGGCGGCAGCAGCGGCGACATCCCCGGCCGCGGCACCAGGCG CCTCCCCAGCAGAAAGCGGACAGGGGCAGTCCTTGTATAACAATGGCGGG GGAGCGGCGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCCCCCGGGAG CGCGTTCATCATCAGGAAAAAGCCGGGCCGAAAGCCGGGCAAGATGAACA AGGCGTCCTTCAACTCGCCGGAGGCGAAGCGGGCGCGCGTTCTTGACTCG ATGGTGTCGGCGGCGGAGCGGTCGAACTTGCTGCAGGAGGCCGGCGCGGA GCACATGCGCAGGCTCGAGCTTGCAGACGCTGAGGTTTGTGTTTGTGTGT GTTTGGTCGATAAGTATATTCAGACGTCGTTTTGTCGGTGTAGCCCGTTC TATCCTATCCGCTGTGCGTCAATCCAAGCGTTTTTTGGGCCTGTGTTTTT GTCTTCTTCTTTGTGTTCACCTGGTGCACCAATACCTTACCTGTGTTGGT TAAGTGAAGATTAAGATTGCCCTCCCCGCCCTCGTCGTTGCTTTGGCTCT CTGCCGCTGCTGCTGCTGCAGCGGTTGGCAATGGAGAAAGAAGAGCATGC TCTGCGCATGGCAATCGGCAAGTCGGCTCTGGCGCTGCTGAGCAAGATGG CCGGAGAGCCGCCGCCTCAGCTGTCTCCGCCACTAGCAGCAGCACCACCG GCGCCGTCGCCACCACCGATGCACGAGCCAGGGTCTGTGGGCTGAAAGAC CTTTGCCTGCTGCTGCT
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1438:6283..10749-

>mRNA_E-fasciculatus_F_contig1438.3186.1 ID=mRNA_E-fasciculatus_F_contig1438.3186.1|Name=mRNA_E-fasciculatus_F_contig1438.3186.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2964bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1438:6283..10749- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATGGCCCACCAGCTGGGATCGCCGCTCCCTGGGGCCTCGCCTCACCC
GCCACAGCAGCAGTACCACAGCAGCGGCAGCAGCAGCGTCCACGACATGC
ACCATCAACATCAGCACCACAACAATGCGAGCTTGCCGGAGTGCTACCCA
TGGTGCTCTGTCGCGGGGTGCACGGAGCGGCCGCTGCGGCAATACACGGC
GACTACGAGCAGGCAGATGATGGCCCACCAGCTGGGATCGCCGCTCCCTG
GGGCCTCGCCTCACCCGCCACAGCAGCAGTACCACAGCAGCGGCAGCAGC
AGCGTCCACGACATGCACCATCAACATCAGCACCACAACAATGCGAGCTT
GCCGGAGTGCTACCCATGGTGCTCTGTCGCGGGGTGCACGGAGCGGCCGC
TGCGGCAATACACGGCGACTACGAGCAGGCAGATCATGTTCATGTGCAAG
ACGCACTTCAACACCGTGCCCCTCAGCACCCGCGAGGGCTGGAAGCAGTA
CCGGGGCACCCGCACCTTCCCGGAGAGCAGGATCGCCGCCTCGTGCAGGC
CGGGCCCGAACAGGGGTCACGGTGCCGCGGCGGCGGTGGCTGCAGCAACG
GCGGCGACAGCGGCGAGCGAGGTGGACCCGGGGTACACGAACCACCCCGA
CGACGAAAAGGGCAACAGAGGCCCGTCCAAGAGCGCACTGTGGCCGGGGA
AGGTCTACAACGTCCTGTATCAGATCATGTTCATGTGCAAGACGCACTTC
AACACCGTGCCCCTCAGCACCCGCGAGGGCTGGAAGCAGTACCGGGGCAC
CCGCACCTTCCCGGAGAGCAGGATCGCCGCCTCGTGCAGGCCGGGCCCGA
ACAGGGGTCACGGTGCCGCGGCGGCGGTGGCTGCAGCAACGGCGGCGACA
GCGGCGAGCGAGGTGGACCCGGGGTACACGAACCACCCCGACGACGAAAA
GGGCAACAGAGGCCCGTCCAAGAGCGCACTGTGGCCGGGGAAGGTCTACA
ACGTCCTGTATCAGGTGTGGAACGCTCAGGCGGAGCAAAAGAAGATCAGC
TCAGGAGACGGTTACATGACGTCATCGGACCGGGCGGCGCTTGTTCCGCA
GGCGGCGAACGTTCTTCGGGAACAGGGGCACCCTGAGATGGCCATCATCC
TGGACAACACCACGGAAGGGGCTCGCAAGGTGTGGAACGCTCAGGCGGAG
CAAAAGAAGATCAGCTCAGGAGACGGTTACATGACGTCATCGGACCGGGC
GGCGCTTGTTCCGCAGGCGGCGAACGTTCTTCGGGAACAGGGGCACCCTG
AGATGGCCATCATCCTGGACAACACCACGGAAGGGGCTCGCAAGGTTATT
CACAGCCGGGTGTTGGCCAAGTACCTCAAGAACCGCGAATTCTTCTCCGC
CAAGCTCAGAAACATCGGCCTGGACCCGACCGAGGTAGCCGAGTGGGATG
CGGCCCTTGTCGCCGCGCAACACCACGCCGACCTCGCACCAAGAGAGCGA
GACCCACCGCACTCAGCAGCATCAGCGGCAGTGCCGCTCTCTCTTGCTCA
TCACTCCTCCCCGCACTGCCATCAACAGCAAGAAGACGACGCGGGGGGTG
ATCTCGGGGGGGGAGCAGCGGCAATCGCCGCGGCAGCGGCGGCGGCGGCA
GCGGCGGCGGCAGCAGCGGCGACATCCCCGGCCGCGGCACCAGGCGCCTC
CCCAGCAGAAAGCGGACAGGGGCAGTCCTTGTATAACAATGGCGGGGGAG
CGGCGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCCCCCGGGAGCGCG
TTCATCATCAGGAAAAAGCCGGGCCGAAAGCCGGGCAAGATGAACAAGGC
GTCCTTCAACTCGCCGGAGGCGAAGCGGGCGCGCGTTCTTGACTCGATGG
TGTCGGCGGCGGAGCGGTCGAACTTGCTGCAGGAGGCCGGCGCGGAGCAC
ATGCGCAGGCTCGAGCTTGCAGACGCTGAGGTTATTCACAGCCGGGTGTT
GGCCAAGTACCTCAAGAACCGCGAATTCTTCTCCGCCAAGCTCAGAAACA
TCGGCCTGGACCCGACCGAGGTAGCCGAGTGGGATGCGGCCCTTGTCGCC
GCGCAACACCACGCCGACCTCGCACCAAGAGAGCGAGACCCACCGCACTC
AGCAGCATCAGCGGCAGTGCCGCTCTCTCTTGCTCATCACTCCTCCCCGC
ACTGCCATCAACAGCAAGAAGACGACGCGGGGGGTGATCTCGGGGGGGGA
GCAGCGGCAATCGCCGCGGCAGCGGCGGCGGCGGCAGCGGCGGCGGCAGC
AGCGGCGACATCCCCGGCCGCGGCACCAGGCGCCTCCCCAGCAGAAAGCG
GACAGGGGCAGTCCTTGTATAACAATGGCGGGGGAGCGGCGGCGGCAGCG
GCAGCGGCGGCGGCGGCGGCGGCCCCCGGGAGCGCGTTCATCATCAGGAA
AAAGCCGGGCCGAAAGCCGGGCAAGATGAACAAGGCGTCCTTCAACTCGC
CGGAGGCGAAGCGGGCGCGCGTTCTTGACTCGATGGTGTCGGCGGCGGAG
CGGTCGAACTTGCTGCAGGAGGCCGGCGCGGAGCACATGCGCAGGCTCGA
GCTTGCAGACGCTGAGCGGTTGGCAATGGAGAAAGAAGAGCATGCTCTGC
GCATGGCAATCGGCAAGTCGGCTCTGGCGCTGCTGAGCAAGATGGCCGGA
GAGCCGCCGCCTCAGCTGTCTCCGCCACTAGCAGCAGCACCACCGGCGCC
GTCGCCACCACCGATGCACGAGCCAGGGTCTGTGGGCTGACGGTTGGCAA
TGGAGAAAGAAGAGCATGCTCTGCGCATGGCAATCGGCAAGTCGGCTCTG
GCGCTGCTGAGCAAGATGGCCGGAGAGCCGCCGCCTCAGCTGTCTCCGCC
ACTAGCAGCAGCACCACCGGCGCCGTCGCCACCACCGATGCACGAGCCAG
GGTCTGTGGGCTGA
back to top