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Homology
BLAST of mRNA_E-fasciculatus_F_contig1428.3125.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI) HSP 1 Score: 453 bits (1165), Expect = 4.020e-150 Identity = 318/399 (79.70%), Postives = 331/399 (82.96%), Query Frame = 2
Query: 143 MQADQGDGMNRAWFDDMISKGFVNQRH---------GARHDGSPIGPIPNPDAADESLSPGSDQAPAPAQQPQQQLVQETGA-SRSWLQGPLRDCARNPGDDGALARSLLDAGAPTNFFDNTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFPPIGVPPRNVPASLAAPALVAEEVSPVVRTVMPQQNGVESLVDARNVYGSTALHRAAFNGREGVVLALLRAGAGVGVVGKSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTPWSQLELAAETRPRGCPRVAKTALLLNTARAARAWARRGWLLMLRDMHSRGLSEAEDIDLDG-GGACSDMDDDQEQDLERLVKQLVEIGEEGCFRLVVGFL 1306
MQ QGDGMN AWF+DMISKGFV QRH A H GSPI I NPDAA+E+ SP SDQA VQETGA SR+WLQ PLRDCARN DDGALARSLLDAGAPTNFFD+TGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGF PIG+PP NVPASL APAL AEE+S + MPQQNGVES+VDARNVYGSTALHRAAFNGREGVVLALLR GA V VVG SGRXXXXXXXXXXXXXXXXXXXXXXXX GSTPWSQL LAAETRPRGCPRVAKTALLLNTAR ARAWARRGWLLMLRD H+RG+ EAE IDLDG GGACSDM+D Q +D RLV QLV IGEEGCFRLVVGFL
Sbjct: 1 MQDGQGDGMNMAWFNDMISKGFVKQRHLPQHTGGPPAAGHAGSPIESILNPDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPPGNVPASLVAPALEAEELSWPMAAPMPQQNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNRGVFEAEAIDLDGRGGACSDMEDGQGEDFARLVNQLVGIGEEGCFRLVVGFL 399
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 456.1 |
| Seed ortholog evalue | 1.7e-125 |
| Seed eggNOG ortholog | 2880.D8LE89 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ankyrin repeat |
| Ec32 ortholog | Ec-00_001340.1 |
| Exons | 7 |
| Model size | 2310 |
| Cds size | 1167 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1428.3125.1 >prot_E-fasciculatus_F_contig1428.3125.1 ID=prot_E-fasciculatus_F_contig1428.3125.1|Name=mRNA_E-fasciculatus_F_contig1428.3125.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=389bp
MQADQGDGMNRAWFDDMISKGFVNQRHGARHDGSPIGPIPNPDAADESLS
PGSDQAPAPAQQPQQQLVQETGASRSWLQGPLRDCARNPGDDGALARSLL
DAGAPTNFFDNTGRSPLHWACTRGNTAVVLALLEAGANGSARDGSGKTPL
HCAAQVGHTAVVMVLLEFYGFPPIGVPPRNVPASLAAPALVAEEVSPVVR
TVMPQQNGVESLVDARNVYGSTALHRAAFNGREGVVLALLRAGAGVGVVG
KSGRSALHLACQNAHAGCVQLLLAWGAQESAIAKDGSTPWSQLELAAETR
PRGCPRVAKTALLLNTARAARAWARRGWLLMLRDMHSRGLSEAEDIDLDG
GGACSDMDDDQEQDLERLVKQLVEIGEEGCFRLVVGFL* back to topmRNA from alignment at E-fasciculatus_F_contig1428:11888..16735- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1428.3125.1 ID=mRNA_E-fasciculatus_F_contig1428.3125.1|Name=mRNA_E-fasciculatus_F_contig1428.3125.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4848bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1428:11888..16735- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGCGGTCCCAATCAGACACGTTGCTAGCGCTATCCGAAGCCCACCTAAC
TGCTGGCTTCGCACCCATACGCTGGCAGTGATTCTGAACAACAGGACCGT
GCCGTTGAGAAGCCGAGCGTGTTGCTGCGGATTGGTGAGTCATCGTTGAG
TGCTTGAAGCAGCGGATGAATCCGACGACGCCGACAGGGTTGTTTCTTGC
CCTCAATGGGTTTCGTCGGCTTTCGCCTGCAGATGCCCGACATGCTATTG
CTGTTGTTGTTGAGGGGTGTACTGCATTCCGACATCGTCTGCTCTTATGG
ATTGATAGTTGGCTGCTTTGAATCATCGCGGTGAGGGTACCTGTTGATCC
ATGTATGTAGATGGAGAGAGAGAGGTGCTGAGTTGTCATTACTTTCGATT
GCGGGTACAGCGACGTTGACAGCAGTGCTCCTTTGGCGTGGGTCGAAGTC
GCCATGGTTTGGTTGGAAAAAAATAGGTTTACAATATGATTGCTCGAGTT
GTTAGAGTGGAAATGTTAGAAGTCGTTTGCTTACACCGTCCGTCCCATGG
CGTGTTCACCTTATGCTGCCCGCCGAGGCAGAAATAAGCATGCAAGCCGA
CCAGGGGGATGGAATGAACAGGGCGTGGTTCGACGATATGATCTCGAAGG
GATTCGTCAAGTGAGTGTAGTGTTATACTCCTCCTGCTACAATATGCATA
GGAAACACAAATGCAAGATATTTTAACCGGCCCGTTCAACCGTCTACGGA
AGTCTTGCCTCATGCCTGAGACAGCAGCTGATGATGTCGATGAATCCTCT
CTGCTTTGTGATATGCATAGGTCTGCCATGCCTACCTACTCTTGGTACCG
ACTTGGTGTTTTGCAGCAGGAATATCTTTTTTGCCTGTCGTAAGGGAGAT
AGATCTATCTTTGGTCCCCGGTTTGCTTACAAAGTATTGTATGCATAGAA
GGGTTGCCGGGAGTGCAATAAACCAGTCACGATGTGTTCGCCGTTCACTC
GTTTGGGGGCGTCTGTGAAGGCGCCATGTACGCGGAAAGTTGGCGAAGAA
ACTCGCTCTCGTTTGTCGATCGCTGGGGAGGCGTCGAGCTTTGTTTTTTT
CGCCCATCCTTTTCTAGACCCAAGGCGTTGTAGCGTTTTCCAAGGTGGGC
GGGGACGGAATACGGATTCGACACTCCGCACTTTTGGGCTCAAGTTTTCG
GTGTTCCTTCATTGCTCGTTGGTTTACCAAGGGAGGGAGACACGCTATCG
AGGGAAGGCTAAGGCTAAACAAACGCCGCCGCCGGCCTCGACTTCTCCAA
CAGGCGGCATGCTGCATGCTTCGTTTATCGCGGAAACCATGCCAACAAAA
CAACTCCTAGAACGTTACCTTAGAAATACACGAAAATGCGCCTGTCCGAC
GTTTGGTGGTCCGTATTTTTTTTGCCCCTACCCACACGTGGCAAAAAAAT
AAAATTCCCGTTGCGTCTCGGCATCTCGATGAACTTTGTCTCGCCTCGAT
TGCTGCTGTGCCATGCTGTAATGCTGGCTTCCCCTTGCAGCCAACGCCAT
GGTGCCCGGCATGACGGGAGCCCCATCGGACCCATCCCGAACCCGGACGC
AGCCGATGAGAGCTTATCACCCGGCAGTGACCAGGCGCCCGCTCCAGCGC
AGCAGGTGATTGGTCCGTACCCCTTGCGCGTGTCCAGAACGTTGCCGGAG
GTATGGTGTGGATCTTCACTCTTGTCGCCGAACGAAGTGGGGCTCGAACA
CGACGATATCGACGTCTTGAACTGTAGTTGTTCGAAGAATGCTCCCTGCT
CTCCTCTGGCACCCGGGCACGTTGAGTGTTTTAAGAAATATACAGTATAT
ACGACGCGCCTGATACCATCAGGGATAAAACCAACCGTTCCATATATGAT
TTTCTACCCCCGTTCGAAGGATTTTTTTCACGTGATGGGCGTGTTTTGAC
CTAATTAAACGGACTTGTGTGAAATGCCCCCGCCCCCCCCCAACCCGCCA
GCCCCAACAACAGCTGGTTCAGGAAACGGGTGCGTCGCGGAGTTGGTTAC
AAGGCCCTCTCCGAGACTGTGCGCGAAACCCGGGCGATGACGGCGCGCTC
GCCCGATCCTTGCTCGACGCCGGTGCCCCCACCAACTTTTTCGACAATGT
GAGATAACGAATAAACGCCCTTCGACTTTTTTTGTTTTCTCGTGTTGTGG
GGGAGTTAGGTTGCGATCACGGAAGGAGTCCGCATCGGTTGCGGATGTTA
GAAGGCTGTGAGCAGAGACCGGATTCACCATTAAATTTTAATTTGAAGAG
TACAACAGCAACAACAACAACAGCAGCAGCAGTAACAACCAGGCAAGGGA
GCGTGCTGACGGCCAGCCAACTTTCGTATGTCTATGGGTTCCCTCCCCGG
TATATATACTACAGCTTTACTTCTTGGCGGGACAGCAGTACCCTGTCAGC
ATTTCAACCCCCCCCCCCGTCATTTGACGGAACTCCCCCTACATGTGTGC
GTGTTCCCAGACGGGACGTTCCCCTCTACACTGGGCCTGTACCCGAGGGA
ACACCGCGGTCGTCCTGGCCCTCCTCGAAGCCGGCGCTAACGGCTCTGCT
CGCGACGGCTCCGGGAAGACCCCCCTGCACTGTGCCGCTCAAGTTGGCCA
CACCGCCGTCGTGATGGTGCTGCTGGAGTTCTACGGGTTCCCTCCCATCG
GAGTGCCGCCAAGGAATGTGCCGGCGTCGTTAGCGGCACCGGCACTAGTG
GCCGAGGAGGTATCGCCGGTGGTGAGGACGGTGATGCCGCAGCAGAATGG
TGTCGAGTCCCTAGTTGACGCCCGGAACGTTTACGGGAGCACGGCGCTGC
ACCGTGCGGCGTTCAACGGCCGAGAGGGCGTCGTGTTGGCGCTGCTGAGG
GCAGGGGCCGGCGTCGGCGTTGTTGGGAAGAGCGGGAGGTGAGTTTATAG
AGTCAGGGTGCCTCCGATTGTAGTGTATCTCGAACTTTGGGTTTTGAATG
GACTCCTGGCAACCGGGAAGGGCTAGTAGAACGGACGTGTATGAGACGAT
GGGTCACGAGTGAGCATGCAACGTTTTACCGTTCGCTTGTTGCAAACATG
ACGTCACAAGAATCAAGAAAGAGCGCTCCCAACGTCTGTATGTATCCGAC
TCCAGCTCGCAGCAGTTCTCTGTCCGCGATGTTGCCTTGCACACGAGACG
CACGCACGGCGTGCACCAGAAATTGTTAGCTGCCGGGCGTTTAATTTCAC
GCCCCGTCCCTCTCAAGGAAATAACCGCCGCCGACGCCGCCACCACCACC
ACCACCACCACAGGCTAGTCTCTCTAACGACACCCCCCTGTCCTCACTCG
TGTGTCAACAACAACAACGACAGGAGCGCGCTCCATCTCGCGTGCCAGAA
TGCGCATGCCGGTTGCGTCCAGCTCCTCCTCGCCTGGGGTGCCCAAGAGT
CAGCCATCGCAAAGGACGGGTCGACCCCCTGGTCTCAGCTTGAGCTAGCC
GCGGAGACCCGCCCTCGCGGCTGTCCCCGCGTGGCCAAGACAGCTCTGCT
CCTCAACACGGCGCGAGCTGCTCGCGCTTGGGCTAGGCGGGGCTGGCTGC
TGATGCTGCGAGACATGCACAGCCGAGGGCTGTCCGAGGCAGAGGACATC
GATCTAGACGGTGGGGGTGCTTGTAGTGACATGGATGACGACCAGGAGCA
GGACCTGGAGAGGCTGGTGAAGCAACTTGTTGAAATTGGCGAGGAAGGGT
GCTTTCGGTTGGTGGTGGGCTTCCTCTAGACGAAAAAACAAGTTGGGTTG
ATGATGGTCGGCCCGCAACCGACTTGTTGCCTTAAGTTGGCGTTGTATTC
TGTATCTGATTTTGTCTCCATCATTATTCTTTTCCGTTCGCTGTGGTGAA
TAATTTGCCTACAGGGCACGCTTTTTTGAATGGCCCTGATTTTTTTTCCC
TCCTATAGTAGCTCCTGATATGCTGCTCTGTTGTTTCAAGGGTAGTATAT
ATTTTCCTTGGTTCCGAGCCGCCAGGCCCCCCCCCCAAGCACCATTCTTC
GTGGGCTTCCTCTCATCCTGTGTGATCCTGGCTGATGCGTCCAGCCACCG
TAAGGTGTTCTGCGTCAGGTCCAGAATTAATACTACCTATTTTGGTGGTT
TCTCTAAAAAATGCGTTGCCAGGGCTTCTTTAGTGCGCGCGGGGGGGTAT
TGCTAAAAGTAGCCATGGGTGTGAAATTCTTCAGGAAGGCGATTACGGCC
GGCGTACATTTTTTTTCTTTCTTTGGCGTTGTGTTTCCTTTTGTCGACAT
CTTGCTGCTGTCGCCTAGATGATAGATGGGACACCATGCCCCCAGCGGGT
AATTCGGGTTATTTTCTTTGGTACATGTAGAAAGGCGGTTTTGGGCTGGC
GATAACTGTAGACATGATGAAAGCAAGGCGTTCGTTCGGTAGCACGTACA
AGTATGTACAACTCTTTTTTTTTTTTTCAGAAGTGGAGATGGGCACACGG
GAGAGAACCAATCGTACCTTCACAGCGTTGCTTGGAATACGGAGAGCGGA
TGGATGTAGTGTATACCTTTTCTGCATTATGGAGGGGGCACTTGCTGACT
TGCTGGTGTGTAACCCTCTTGTTGGTCACGGTCAGCCGAAGAGGAGAGAA
GGGTTGACACACAGAGAGAGGGGTGTCTGGGTACGAAGTGTACAGCGTGA
GGTCGTATTGTTTGGGGTGCCAACAAAACTTTGATTTTGTACAAGCTCAA
TTTAAAAATGTATGCCTATACTAGATATGTATTCATGTTTTCTTGCATGG
CGGTGAGCAATGATGGTGAGCAGTGATGGTCACCCGGGTTATTCGGGG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1428:11888..16735- >mRNA_E-fasciculatus_F_contig1428.3125.1 ID=mRNA_E-fasciculatus_F_contig1428.3125.1|Name=mRNA_E-fasciculatus_F_contig1428.3125.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2334bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1428:11888..16735- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAAGCCGACCAGGGGGATGGAATGAACAGGGCGTGGTTCGACGATAT
GATCTCGAAGGGATTCGTCAAATGCAAGCCGACCAGGGGGATGGAATGAA
CAGGGCGTGGTTCGACGATATGATCTCGAAGGGATTCGTCAACCAACGCC
ATGGTGCCCGGCATGACGGGAGCCCCATCGGACCCATCCCGAACCCGGAC
GCAGCCGATGAGAGCTTATCACCCGGCAGTGACCAGGCGCCCGCTCCAGC
GCAGCAGCCAACGCCATGGTGCCCGGCATGACGGGAGCCCCATCGGACCC
ATCCCGAACCCGGACGCAGCCGATGAGAGCTTATCACCCGGCAGTGACCA
GGCGCCCGCTCCAGCGCAGCAGCCCCAACAACAGCTGGTTCAGGAAACGG
GTGCGTCGCGGAGTTGGTTACAAGGCCCTCTCCGAGACTGTGCGCGAAAC
CCGGGCGATGACGGCGCGCTCGCCCGATCCTTGCTCGACGCCGGTGCCCC
CACCAACTTTTTCGACAATCCCCAACAACAGCTGGTTCAGGAAACGGGTG
CGTCGCGGAGTTGGTTACAAGGCCCTCTCCGAGACTGTGCGCGAAACCCG
GGCGATGACGGCGCGCTCGCCCGATCCTTGCTCGACGCCGGTGCCCCCAC
CAACTTTTTCGACAATACGGGACGTTCCCCTCTACACTGGGCCTGTACCC
GAGGGAACACCGCGGTCGTCCTGGCCCTCCTCGAAGCCGGCGCTAACGGC
TCTGCTCGCGACGGCTCCGGGAAGACCCCCCTGCACTGTGCCGCTCAAGT
TGGCCACACCGCCGTCGTGATGGTGCTGCTGGAGTTCTACGGGTTCCCTC
CCATCGGAGTGCCGCCAAGGAATGTGCCGGCGTCGTTAGCGGCACCGGCA
CTAGTGGCCGAGGAGGTATCGCCGGTGGTGAGGACGGTGATGCCGCAGCA
GAATGGTGTCGAGTCCCTAGTTGACGCCCGGAACGTTTACGGGAGCACGG
CGCTGCACCGTGCGGCGTTCAACGGCCGAGAGGGCGTCGTGTTGGCGCTG
CTGAGGGCAGGGGCCGGCGTCGGCGTTGTTGGGAAGAGCGGGAGACGGGA
CGTTCCCCTCTACACTGGGCCTGTACCCGAGGGAACACCGCGGTCGTCCT
GGCCCTCCTCGAAGCCGGCGCTAACGGCTCTGCTCGCGACGGCTCCGGGA
AGACCCCCCTGCACTGTGCCGCTCAAGTTGGCCACACCGCCGTCGTGATG
GTGCTGCTGGAGTTCTACGGGTTCCCTCCCATCGGAGTGCCGCCAAGGAA
TGTGCCGGCGTCGTTAGCGGCACCGGCACTAGTGGCCGAGGAGGTATCGC
CGGTGGTGAGGACGGTGATGCCGCAGCAGAATGGTGTCGAGTCCCTAGTT
GACGCCCGGAACGTTTACGGGAGCACGGCGCTGCACCGTGCGGCGTTCAA
CGGCCGAGAGGGCGTCGTGTTGGCGCTGCTGAGGGCAGGGGCCGGCGTCG
GCGTTGTTGGGAAGAGCGGGAGGAGCGCGCTCCATCTCGCGTGCCAGAAT
GCGCATGCCGGTTGCGTCCAGCTCCTCCTCGCCTGGGGTGCCCAAGAGTC
AGCCATCGCAAAGGACGGGTCGACCCCCTGGTCTCAGCTTGAGCTAGCCG
CGGAGACCCGCCCTCGCGGCTGTCCCCGCGTGGCCAAGACAGCTCTGCTC
CTCAACACGGCGCGAGCTGCTCGCGCTTGGGCTAGGCGGGGCTGGCTGCT
GATGCTGCGAGACATGCACAGCCGAGGGCTGTCCGAGGCAGAGGACATCG
ATCTAGACGGTGGGGGTGCTTGTAGTGACATGGATGACGACCAGGAGCAG
GACCTGGAGAGGCTGGTGAAGCAACTTGTTGAAATTGGCGAGGAAGGGTG
CTTTCGGTTGGTGGTGGGCTTCCTCTAGGAGCGCGCTCCATCTCGCGTGC
CAGAATGCGCATGCCGGTTGCGTCCAGCTCCTCCTCGCCTGGGGTGCCCA
AGAGTCAGCCATCGCAAAGGACGGGTCGACCCCCTGGTCTCAGCTTGAGC
TAGCCGCGGAGACCCGCCCTCGCGGCTGTCCCCGCGTGGCCAAGACAGCT
CTGCTCCTCAACACGGCGCGAGCTGCTCGCGCTTGGGCTAGGCGGGGCTG
GCTGCTGATGCTGCGAGACATGCACAGCCGAGGGCTGTCCGAGGCAGAGG
ACATCGATCTAGACGGTGGGGGTGCTTGTAGTGACATGGATGACGACCAG
GAGCAGGACCTGGAGAGGCTGGTGAAGCAACTTGTTGAAATTGGCGAGGA
AGGGTGCTTTCGGTTGGTGGTGGGCTTCCTCTAG back to top
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