mRNA_E-fasciculatus_F_contig14250.3111.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14250.3111.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI) HSP 1 Score: 603 bits (1555), Expect = 2.230e-200 Identity = 422/539 (78.29%), Postives = 441/539 (81.82%), Query Frame = 1
Query: 16 MAGNGYGNDRGGHVYDDEDDDDGYNAHQHGHGGRNFASRAYNSYDRRYDNTNNAYQSARYDVGASSPRGLGGPHDRGGVYAPPTATTINNNRGVGSSQYPSRRGGPPGATRYPNPSTAYDNFSYPPSRPAAPSPRQPQGFGGVAGQLLNAAGQLSPSNKRASEGHAVFDDEMTIGPAAGGEKSAAARLKSASASGGSAAASRSFGLYAPSGGGSGEIPRGAASSRGDHGDGGGEARFRDRGRSQAARAPASPRYQERTWNSFEERDQXXXXXXXXXXXXXXXXXXXTSARAPATAAVDTAQERHSGARTPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSTAXXXXXXXXXXXXXXXXRPAA---APSRPPLSWVTIERAGKRRLGGPAEERRSKLGGENETVSPFQGCPIHDCPMGASDGISVSWMARHLESHTKVAMEKPQKELYIRSTVAEVLHDMCLDSEVPRAHRKFERRKMSRALLDTPRAGIGHLAGIMETVATGDNKSPHVR 1623
MAGNGYGNDRGG+VYD++DDD Y+A QHGHG RNFA R Y+SYD RYD NNAYQ+ RYD SSPRGLGGPHDRG VYAPPTAT INNNRGVGSSQYPSRRGGPPGATRYPNPSTAYDNFSYPPS PSPRQPQGFGGVAGQLLNAAGQLSPSNKRAS G AVFDDE+TIGPAA G + +AARLKS SA ASR FGLYAPSGGGSGEIP GA SSRGD GDGGG ARFRDRGRSQ A+AP +PRYQERT NSFEERDQ XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX APSRPPLSW+TIERAGKRRLG PAEERR+KLGGENETVSPFQGCPIHDCPMG+SDGISVSWMARHLESHTKVAMEKPQKELYIRS+VAE+LH+MCLDSEVPRA RKFERRKMSRALLDTPRAGIGHLAG++ETV TGDNKSPHVR
Sbjct: 1 MAGNGYGNDRGGYVYDEDDDDGDYSAQQHGHGSRNFADRGYSSYDGRYD-INNAYQTTRYDP--SSPRGLGGPHDRG-VYAPPTATIINNNRGVGSSQYPSRRGGPPGATRYPNPSTAYDNFSYPPSPRPPPSPRQPQGFGGVAGQLLNAAGQLSPSNKRASGGRAVFDDEVTIGPAAAGGEKSAARLKSTSAXXXXXXASR-FGLYAPSGGGSGEIP-GAGSSRGDDGDGGGNARFRDRGRSQIAKAPTNPRYQERTRNSFEERDQQMREQKHQQRAPHQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSRPPLSWITIERAGKRRLGVPAEERRTKLGGENETVSPFQGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEKPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMSRALLDTPRAGIGHLAGMIETVVTGDNKSPHVR 533
BLAST of mRNA_E-fasciculatus_F_contig14250.3111.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE) HSP 1 Score: 518 bits (1335), Expect = 5.160e-168 Identity = 372/522 (71.26%), Postives = 391/522 (74.90%), Query Frame = 1
Query: 106 HGGRNFASRAYNSYDRRYD-NTNNAYQSARYDVGASSPRGLGGPHDRGGVYAPPTATTINNNRGVGSSQYPSRRGGPPGATRYPNPSTAYDNFSYPPSRPAAPSPRQPQGFGGVAGQLLNAAGQLSPSNKRASEGHAVFDDEMTIGPAAGGEKSAAARLKSASASGGSAAASRSFGLYAPSGGGSGEIPRGAASSRGDHGDGGGEARFRDRGRSQAARAPASPRYQERTWNSFEERDQXXXXXXXXXXXXXXXXXXXTSARAPATAAVDTAQERHSGARTPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSTAXXXXXXXXXXXXXXXXRPA---------------AAPSRPPLSWVTIERAGKRRLGGPAEERRSKLGGENETVSPFQGCPIHDCPMGASDGISVSWMARHLESHTKVAMEKPQKELYIRSTVAEVLHDMCLDSEVPRAHRKFERRKMSRALLDTPRAGIGHLAGIMETVATGDNKSPHVR 1623
HGGRNFA R Y+SYD RYD N NN YQS RYD SSPRG+GGPHDRG AT INNNRGVGSSQ+PSRRGGPPGATRYPNPSTAYDNFSYPPS RQPQGFGGVAGQLLNAAGQLSPSNKRAS G AVFDDE+TIGPAA G + +AARLKS SA SR FGLYAPSGGGSGEIP GA SSRGD GDGGG RFRDRGRSQ ARAP +PRYQ+ T SFEERD+ A AP XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX AAPSRPPLSW+TIERAGKRRLG PAEERR LGGENETVSPF+GCPIHDCPMG+SDGISVSWMARHLESHTKVAME+PQKELYIRS+VAE+LH+MCLDSEVPRA RKFERRKM+RALLDTPRAGIGHLAG+MET+ TGDNK PHVR
Sbjct: 7 HGGRNFADRGYSSYDGRYDINNNNGYQSTRYDT--SSPRGVGGPHDRG------VATIINNNRGVGSSQHPSRRGGPPGATRYPNPSTAYDNFSYPPSPRPXXXXRQPQGFGGVAGQLLNAAGQLSPSNKRASGGRAVFDDEVTIGPAAAGGEKSAARLKSTSAXXXXXXXSR-FGLYAPSGGGSGEIP-GAGSSRGDLGDGGGSDRFRDRGRSQIARAPTNPRYQDGTRKSFEERDEQVREQKHQQRAPHQR-----KASAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRPPAAPADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPSRPPLSWITIERAGKRRLGVPAEERRMMLGGENETVSPFRGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEQPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMARALLDTPRAGIGHLAGVMETMVTGDNKDPHVR 513 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14250.3111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14250.3111.1 >prot_E-fasciculatus_F_contig14250.3111.1 ID=prot_E-fasciculatus_F_contig14250.3111.1|Name=mRNA_E-fasciculatus_F_contig14250.3111.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=536bp MAGNGYGNDRGGHVYDDEDDDDGYNAHQHGHGGRNFASRAYNSYDRRYDNback to top mRNA from alignment at E-fasciculatus_F_contig14250:239..3207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14250.3111.1 ID=mRNA_E-fasciculatus_F_contig14250.3111.1|Name=mRNA_E-fasciculatus_F_contig14250.3111.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2969bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14250:239..3207- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14250:239..3207- >mRNA_E-fasciculatus_F_contig14250.3111.1 ID=mRNA_E-fasciculatus_F_contig14250.3111.1|Name=mRNA_E-fasciculatus_F_contig14250.3111.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3216bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14250:239..3207- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |