mRNA_E-fasciculatus_F_contig1421.3078.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: D8LNR2_ECTSI (Zinc finger, C2H2 type family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNR2_ECTSI) HSP 1 Score: 1491 bits (3859), Expect = 0.000e+0 Identity = 883/1081 (81.68%), Postives = 905/1081 (83.72%), Query Frame = 2
Query: 242 MQHASGKDYDPSVWAKQRQERIKRALQARQKRQSGSPDKNHTFKPQLLSSTDGARSKLPPGARVGDASATQGAYDLTVLDNMDGAFPPKRTSANIYRDNRYDKADGGARGPMDFGETRDSLDRLAVSTSDGDRQRLARMGSTSSHSSAVAPPPLPSPTKSESMEDNTGSEHTHRPHAPRAGEEAGLGGRRRRVREDPGGRWTGPTREAAAAQNGGAYGEYDPATKHGLGDAFNGGGGSRRPAAAATGDDALSHELEQRSHVRGAIAEEHRPGQPRHGGDDRSGR-AVGNGGPVHAGGAE--AAATRRNSGGVTCENEDPHSAEARDPIERPEDADFLASLRGGEGAETGANRRGGGSRVAPGRQAARARHARRPEWNSDTGAAASLGSPRAAVVTDNSPSAVQGRIEASSTRRRNTDGTIGSIADSPYAAGGGTIGGSNGTAANGGGNATWKHKHTKTLPWGDEEGALGGADVVGGEDDGDGDGGRDLYGFGRPTASQLARKGADEGRGGAPRSGYRTQQMMPSPSTGNLTAAYRGGDDRFGGADEGVDPPVERGVPAEKEQLRRNLSLLKKKMHGQAGSRRSQSAGPRAGDLFGDPNAAPSGPGGADSHPAGGERQHLHMTTGTAPAMMPADPGAFLRDRDAAGRALGRRGVGGGARRRPPPDGPGSPYAIDPNPRGAAXXXXXXXXXXQHQHRQPPLEQQNXXXXXXXQHASI------------GGRRHGPFEGNHDSPRN--TGGRAAVPTDVVRSRPHDHSNTRE--GGGTGYARR----AAPGRAGGGRPRXXXXXXXXXXXXRXXXWEXXXXXXXXXX---DGSSRXXXXXXXXXXXXXKGGGGRGGRGQGYADDLPPDAFPDEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQAARKTASGASGASGRGRGQRW 3406
MQHASGKDYDPS WAKQRQERIKRALQARQKRQSGSPDKNHTFKP LLSS DGARSKLPPGARVGDASATQGAYDLTVLDNMDGAFPPKRTSANIYRDNRYDKADGG RGPMDFGETRDSLDRLAVSTSD DRQRLARMGSTSS+SSAVAPPPLPSPTKSES +DN GSEHTHRPHAPRAGEEA GGRRR +REDPGGRWTGPTRE AAAQNGGAYGEYDPATK G GDAFNG GG RR AAAATGDDALSHELEQR HVRGAIAEEHRPGQPRHG DD+ GR VG+ GPVHAGGAE AAATRR SGG T EN DPH AE RD IERPE ADFLASLRGGEGAE GANR+ GGSRV PGRQAARAR RRPEWNSDTGAAASLGSPRAA+V DNSPSAVQGRIE+SS RRRNTDG +GSIADSPYAAGGGTIGGSNGT+A GGGNATWKHKHTKTLPWG E ALG A VVGGEDDG GR+LYGFGRPTASQLAR+G DEGRGGAPR GYRTQ MMPSPSTGNLTAAYRGG DRFGG DEG++PPVERGVPAEKEQLRRNLSLLKKKMHGQAGSRRSQSAGPRAG+LFGDPNAAPSGPGG DSH GG RQHLHMTTGTAPAMMPADPGAFLRDRDAA RALGRRGVGGGAR PDGPGSPYAIDPN RG XXXXXXXXXX XXXXXXX GGRRHGPFEG HDSPR T GR A P DV RSRPHDHS + GGGT Y RR AAP R GGGR R R WE XXXXX D XXXXXXXXXXXXX G +GYADDLPPDAFPDEQVEL+ECR CGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGG G XXXXXXXXX FDDTPVGGAA+RGA+SSKWRQQSKQFRDALRQARVV DAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNI+AKPSVLKKGSGSLLGQAARKTASGAS G+GRGQRW
Sbjct: 1 MQHASGKDYDPSEWAKQRQERIKRALQARQKRQSGSPDKNHTFKPHLLSSNDGARSKLPPGARVGDASATQGAYDLTVLDNMDGAFPPKRTSANIYRDNRYDKADGGVRGPMDFGETRDSLDRLAVSTSDVDRQRLARMGSTSSYSSAVAPPPLPSPTKSESTQDNNGSEHTHRPHAPRAGEEAATGGRRRIIREDPGGRWTGPTRETAAAQNGGAYGEYDPATKRGAGDAFNGEGG-RRSAAAATGDDALSHELEQRPHVRGAIAEEHRPGQPRHGRDDQQGRRTVGDDGPVHAGGAEEAAAATRRYSGGATGENGDPHPAEPRDGIERPEGADFLASLRGGEGAEAGANRQRGGSRVGPGRQAARARRGRRPEWNSDTGAAASLGSPRAAIVADNSPSAVQGRIESSSARRRNTDGAVGSIADSPYAAGGGTIGGSNGTSATGGGNATWKHKHTKTLPWGGEGEALGEAGVVGGEDDG----GRELYGFGRPTASQLARRGPDEGRGGAPRLGYRTQ-MMPSPSTGNLTAAYRGGGDRFGGDDEGMNPPVERGVPAEKEQLRRNLSLLKKKMHGQAGSRRSQSAGPRAGELFGDPNAAPSGPGGVDSHLEGGGRQHLHMTTGTAPAMMPADPGAFLRDRDAAERALGRRGVGGGARXXXXPDGPGSPYAIDPNARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTNPAGGRRHGPFEGKHDSPRTGFTSGRTAAPADVARSRPHDHSGAGDVGGGGTRYTRRGTHAAAPARPGGGRARVGGASGGQGSPDRRRAWEGENGGXXXXXSQGDXXXXXXXXXXXXXXXXXXXXGXXXXXXEGYADDLPPDAFPDEQVELEECRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGRG---------GXXXXXXXXXPPRGFDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIRAKPSVLKKGSGSLLGQAARKTASGAS---GKGRGQRW 1063
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A835Z9Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y9_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.980e-37 Identity = 112/200 (56.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query: 2756 PDAFPDEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQAARK 3355
P + D V+L++C CGRRF A KH C +VF KRK FD A+MR+ GTE+ +F K +G +G XXXXXXXXXXXXXXXXX DD PV G GAKS+KWRQQS FR+A+R AR+VT AQ G LA LP +APDPSL+PCPHC RRF+E A ERH+ C +I+A+PS L KGSG LG A+RK
Sbjct: 228 PQEYAD--VQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFT-AKTPSG----RGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNG--GAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRK 418
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A7S4DGN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGN0_HETAK) HSP 1 Score: 139 bits (350), Expect = 2.580e-33 Identity = 105/216 (48.61%), Postives = 131/216 (60.65%), Query Frame = 2
Query: 2714 GRGGRGQGYADDLPPDAFPDEQVELKECRM-CGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEK-FAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQAARK 3355
GRGG G PD + L EC + CGR+F AL KH + C KVF KR+ FDT + R+ G E K AK K + XXXXXXXXXXXXXXXX +D PVG K+SKW+ QS Q R+A++Q R++ +K GKSLADLP PSAPDPSL+PCP CGRRF++ A +RH+ C I+ KP L++G+ LG AARK
Sbjct: 8 GRGGSAGGALAFAAPDGSAVDTT-LYECGVGCGRKFNEKALAKHEKVCRKVFVEKRRAFDTQQQRITGEEHAKALAKTKQ------EEAARXXXXXXXXXXXXXXXXANPEDQPVGNG-----KASKWKAQSDQLREAMKQQRLIARYEKEGKSLADLPQMAPSAPDPSLVPCPTCGRRFNQQAADRHIPKCATIRNKPKTLQRGARVGLGAAARK 211
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A5D6XYR0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYR0_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.540e-30 Identity = 90/196 (45.92%), Postives = 116/196 (59.18%), Query Frame = 2
Query: 2735 GYADDLPPDAFPDEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKG 3322
G+ PD FPDE E+ EC C RRF +L KH + C KVF +RKVF+ A RL+GTE EK AK+ G++G XXXXXXXXXXXX ++ P+ K W+ +S FRDA++ +R VT A K G+ +LPP KPSAPDPSLI C +C RRF++ A ERH+ C+ K + LK G
Sbjct: 10 GFGSSEQPDEFPDESEEMAECDNCHRRFNVNSLVKHRKVCEKVFTGQRKVFNMAAKRLEGTEAEKVAKKTGKSG--------------XXXXXXXXXXXXAEEQPL--------KKPDWKSKSSAFRDAMKASRDVTIALKEGR---ELPPMKPSAPDPSLIQCEYCSRRFNDKAAERHITFCRE-KTQRDSLKSG 179
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A5A8D635_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D635_CAFRO) HSP 1 Score: 137 bits (344), Expect = 2.410e-29 Identity = 88/187 (47.06%), Postives = 110/187 (58.82%), Query Frame = 2
Query: 2771 DEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGA-ASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 3328
D+ V + EC CGR+F P ALEKH+R C KVFQ KR+ FD+ R+ L G GG XXXXXXX + GGA A+ AK WRQ+S Q R+A++ +R++T AQK GK L DLPP +APDPSL+PCPHCGR F+ +A ERH+ C KAKPS L +G G
Sbjct: 469 DDGVRV-ECSTCGRKFRPDALEKHARVCLKVFQKKRRKFDSTSARMPPEALA-----VGADGGXXXXXXXXXXXXGAPARGPRSRGGPPAGSAAGGADAAARAKREAWRQKSSQLREAMKASRMITKAQKEGKDLRDLPPMPAAAPDPSLVPCPHCGRTFNAVAAERHIPKCATTKAKPSRLARGGG 649
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A5A8DGU2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGU2_CAFRO) HSP 1 Score: 134 bits (336), Expect = 3.610e-28 Identity = 83/203 (40.89%), Postives = 105/203 (51.72%), Query Frame = 2
Query: 2720 GGRGQGYADDLPPDAFPDEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 3328
G G G + P D+ V + EC CGR+F P ALEKH+R C KVFQ KR+ FD+ + G A GG AA+R AK WRQ+S Q R+A++ +R++T AQK GK L DLPP +APDPSL+PCPHCGR F+ +A ERH+ C KAKPS L +G G
Sbjct: 563 GADGGGAMSEYPEPDEEDDGVRV-ECSTCGRKFRPDALEKHARVCLKVFQKKRRKFDST----------RGGPPAGSAAGGAD------------------------------AAAR-AKREAWRQKSSQLREAMKASRMITKAQKEGKDLRDLPPMPAAAPDPSLVPCPHCGRTFNAVAAERHIPKCATTKAKPSRLARGGG 723
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A812UVN6_SYMMI (ZC2HC1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UVN6_SYMMI) HSP 1 Score: 120 bits (300), Expect = 8.050e-27 Identity = 93/189 (49.21%), Postives = 119/189 (62.96%), Query Frame = 2
Query: 2783 ELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGT-ELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQA 3346
E EC CGR+F P EKH + C KVF K K FD+ +MR+ EL K + R+ + XXXXXXXXXXXXXXXXXXXX KW++QS QFR+A+R AR+V A+K+G + ++ PSAPDPSL+PCP+CGR F+E A ERH+ CKNI+A+P LK+GSG G+A
Sbjct: 17 EQLECPDCGRKFNPIPYEKHVKICAKVFLQKSKAFDSKKMRIADNPELLKIQQAALRS-----EKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKWKEQSNQFREAMRMARMVAKAEKTGGPMPEM---APSAPDPSLVPCPNCGRTFNERAAERHIPQCKNIRAQPKSLKRGSGGAGGRA 197
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A8K1CNL1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNL1_PYTOL) HSP 1 Score: 125 bits (314), Expect = 7.420e-26 Identity = 76/186 (40.86%), Postives = 100/186 (53.76%), Query Frame = 2
Query: 2735 GYADDLPPDAFPDEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPK--PSAPDPSLIPCPHCGRRFSELAGERHMQHCK 3286
G+ + PD +PDE E++EC C RRF +L KH + C KVF +RKV+D + RL+GTE EK K+ R G++ +D P+ AK+ W+QQS FRDA+R R + A K G+ PPP PSAPDPSLIPC CGRRF++ A ERH+ CK
Sbjct: 397 GFQNGDAPDEYPDEMEEMEECGNCHRRFNITSLAKHQKICEKVFTGQRKVYDMSAKRLEGTEAEKLIKQSKR----GKKASASAAA---------------EDKPIK------AKAVDWKQQSNAFRDAMRANREINKAIKEGR-----PPPAMVPSAPDPSLIPCDFCGRRFNDKAAERHIPFCK 552
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A7R9VCN1_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VCN1_9CHLO) HSP 1 Score: 126 bits (316), Expect = 1.140e-25 Identity = 73/186 (39.25%), Postives = 100/186 (53.76%), Query Frame = 2
Query: 2771 DEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAASRGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 3328
D ++ EC CGRRF P ALEKH+R C +VF KR+ +D++ RL+GTE +A G R+G + G + S G + KW+ QS+ +DA++ R + G+ + ++P SAPDPSL+ CPHCGRRF+E A ERHM HC N AKP LK G+G
Sbjct: 597 DSDMDRVECGSCGRRFLPEALEKHARVCSRVFANKRRPYDSSRHRLEGTEAAAYA--------GPRRGGKPAAHG---------------SSHGGKSGSGGGEVPKWKAQSQALQDAMKNMRELKSRLARGEDIRNIPVVA-SAPDPSLVQCPHCGRRFNERAAERHMSHCANTVAKPKFLKAGTG 758
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Match: A0A8J5J921_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J921_9STRA) HSP 1 Score: 114 bits (284), Expect = 8.240e-25 Identity = 66/186 (35.48%), Postives = 99/186 (53.23%), Query Frame = 2
Query: 2759 DAFPDEQVELKECRMCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGGGRQGXXXXXXXXXXXXXXXXXXXXFDDTPVGGAAS--RGAKSSKWRQQSKQFRDALRQARVVTDAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSV 3310
D + D ++++C C R+F A+ +KH + C KVF +RKVF+ A RL+GTE EK AKE G + TP+ + ++ W+Q+S+ FR+A++ +R V+ A K GK +LPP PSAPDPSLI C +C RRF+E A ERH+ C+ + ++
Sbjct: 23 DEYGDGAEQMEQCHNCSRKFNAASFQKHQKICEKVFSGQRKVFNMAAKRLEGTEAEKLAKEAKTNNKGPTR-----------------------KTPLSATEQPIKVKSAADWKQKSEMFRNAMKASRDVSKALKEGK---ELPPVMPSAPDPSLIQCEYCSRRFNEKAAERHINFCREKSQRDNI 182 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1421.3078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1421.3078.1 >prot_E-fasciculatus_F_contig1421.3078.1 ID=prot_E-fasciculatus_F_contig1421.3078.1|Name=mRNA_E-fasciculatus_F_contig1421.3078.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1056bp MQHASGKDYDPSVWAKQRQERIKRALQARQKRQSGSPDKNHTFKPQLLSSback to top mRNA from alignment at E-fasciculatus_F_contig1421:1214..11607+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1421.3078.1 ID=mRNA_E-fasciculatus_F_contig1421.3078.1|Name=mRNA_E-fasciculatus_F_contig1421.3078.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=10394bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1421:1214..11607+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1421:1214..11607+ >mRNA_E-fasciculatus_F_contig1421.3078.1 ID=mRNA_E-fasciculatus_F_contig1421.3078.1|Name=mRNA_E-fasciculatus_F_contig1421.3078.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6336bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1421:1214..11607+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |