mRNA_E-fasciculatus_F_contig14200.3071.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI) HSP 1 Score: 243 bits (621), Expect = 7.140e-77 Identity = 127/136 (93.38%), Postives = 129/136 (94.85%), Query Frame = 1
Query: 1 CMTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVLVPLRRPLFKSTAFRIAASVALVACAVSAVVAASGSRGSCGVRAHGHV 408
CMTESH SLRDDYEVSIKELDLLVSIAM +DGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETG ACECVVTSPCDG GVLVPLRRPLFK+TA RIAASVALVACAVSAVVAAS RGSCGVRAHGHV
Sbjct: 314 CMTESHTSLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGNACECVVTSPCDGAGVLVPLRRPLFKNTALRIAASVALVACAVSAVVAASRGRGSCGVRAHGHV 449
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: A0A6H5K3S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S4_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.050e-47 Identity = 87/102 (85.29%), Postives = 89/102 (87.25%), Query Frame = 1
Query: 1 CMTESHDSLRDDYEV---------SIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVLVPLR 279
CMTESH SLRDDYEV SIKELDLLVSIAM +DGVYGSRMTGGGFGGCTVTLVKAEAA+ALMTKLREEYLAETG ACECVVTSPCDG GVLVPLR
Sbjct: 276 CMTESHASLRDDYEVPYRNLFAKVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAQALMTKLREEYLAETGNACECVVTSPCDGAGVLVPLR 377
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: K0T9A4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9A4_THAOC) HSP 1 Score: 114 bits (286), Expect = 1.940e-27 Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVLVPL 276
M ESH S+++DYEVS KE+D LV++A S DGVYGSRMTGGGFGGCTVTLVK EAA L+ L+EEY +TG CEC VTSP G GV+V L
Sbjct: 356 MNESHSSMKEDYEVSCKEIDTLVALAQSFDGVYGSRMTGGGFGGCTVTLVKKEAANGLIGYLKEEYK-KTGQECECFVTSPSQG-GVVVDL 444
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: UPI0009E55A65 (galactokinase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E55A65) HSP 1 Score: 107 bits (266), Expect = 7.560e-25 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVL 267
M ESH+SLRDDYEVS +ELDLLV +A+ DGVYGSRMTGGGFGGCTVTLVK + ++L+ ++E Y G CVVTSP DG L
Sbjct: 304 MVESHNSLRDDYEVSCEELDLLVKLALEVDGVYGSRMTGGGFGGCTVTLVKRSSVDSLIKHIQEGY----GNKATCVVTSPADGARAL 387
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: A0A2B4SUG3_STYPI (Galactokinase n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SUG3_STYPI) HSP 1 Score: 105 bits (263), Expect = 1.970e-24 Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVL 267
M ESH+SLRDDYEVS +ELD+LV +AM DGVYGSRMTGGGFGGCTVT+VK + ++L+ ++E Y G CVVTSP DG L
Sbjct: 301 MVESHNSLRDDYEVSCEELDVLVKLAMEVDGVYGSRMTGGGFGGCTVTVVKKSSVDSLIKHIQEGY----GNKATCVVTSPADGAKAL 384
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: UPI00077A0EEC (galactokinase-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A0EEC) HSP 1 Score: 103 bits (258), Expect = 1.060e-23 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVL 267
M ESH+SLRDDYEVS +ELD+LV +A+ DGVYGSRMTGGGFGGCTVTLVK + E L+ ++E Y CVVTSP DG L
Sbjct: 304 MVESHNSLRDDYEVSCQELDVLVKLALEVDGVYGSRMTGGGFGGCTVTLVKRSSVEPLIKHIQEGY----SNKATCVVTSPADGAKAL 387
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: A0A482SR14_9ARCH (GHMP_kinases_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR14_9ARCH) HSP 1 Score: 98.2 bits (243), Expect = 1.320e-23 Identity = 52/87 (59.77%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGV 264
MTESH+SLRDDYEVS ELD L A+ GVYGSRMTGGGFGGCTVTLV E+L LRE YL + CE +P +G GV
Sbjct: 13 MTESHNSLRDDYEVSCGELDFLAHSALQVKGVYGSRMTGGGFGGCTVTLVDKSEVESLKAFLRENYLKQFQVNCEFYEATPAEGGGV 99
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: A0A7S1GFP4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GFP4_CYCTE) HSP 1 Score: 103 bits (257), Expect = 2.470e-23 Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDG 255
M +SH S+RDDYEVS +E+D+L +A + +GV+GSR+TGGGFGGCTVTLV+ A ALM LR+EY A+TG CEC TSP G
Sbjct: 353 MNKSHFSMRDDYEVSCEEIDVLADLAQAHEGVFGSRLTGGGFGGCTVTLVEKAHAAALMEHLRKEYKAKTGKDCECFETSPGPG 436
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: A0A7S0SZX5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZX5_9STRA) HSP 1 Score: 102 bits (254), Expect = 4.740e-23 Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDG 255
MT+SH+SLRDDYEVS ELD+LV +A+ GVYGSRMTGGGFGGCTVTLV A AL L+ +Y TG CEC+ P G
Sbjct: 280 MTQSHESLRDDYEVSCNELDILVELALEIPGVYGSRMTGGGFGGCTVTLVHINAVTALTDHLKLKYFERTGIHCECIEAIPSAG 363
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Match: A0A1E7F846_9STRA (Putative galactokinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F846_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.060e-23 Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 4 MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGTACECVVTSPCDGTGVL 267
M SH S+RDDYEVS +E+D+LV IA + GVYGSR+TGGGFGGCTVTLV E A LM ++ EY TGT C C VT P G +L
Sbjct: 418 MNASHSSMRDDYEVSCEEVDILVDIAQNFSGVYGSRLTGGGFGGCTVTLVDEERAIDLMEHMKTEYKTRTGTDCPCFVTRPARGAHLL 505 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14200.3071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14200.3071.1 >prot_E-fasciculatus_F_contig14200.3071.1 ID=prot_E-fasciculatus_F_contig14200.3071.1|Name=mRNA_E-fasciculatus_F_contig14200.3071.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp MTESHDSLRDDYEVSIKELDLLVSIAMSSDGVYGSRMTGGGFGGCTVTLVback to top mRNA from alignment at E-fasciculatus_F_contig14200:2..2357+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14200.3071.1 ID=mRNA_E-fasciculatus_F_contig14200.3071.1|Name=mRNA_E-fasciculatus_F_contig14200.3071.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2356bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14200:2..2357+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14200:2..2357+ >mRNA_E-fasciculatus_F_contig14200.3071.1 ID=mRNA_E-fasciculatus_F_contig14200.3071.1|Name=mRNA_E-fasciculatus_F_contig14200.3071.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14200:2..2357+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |