mRNA_E-fasciculatus_F_contig141.2995.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.700e-83 Identity = 231/442 (52.26%), Postives = 270/442 (61.09%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDYDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGYGTPLLIALD-WSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEED---NIQRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSISK--GCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL 1308
LL AAA G ++M+R LL AGATDDVNV FG +SALHVAAARGA+D+C ALMIAGADPN D XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX C N SP +IAA GHA +LK L+ + D + GW LH +S D V + G AVRVLL AGADVN + T TPL +A++ W S G + AR D TPLH+AC + + VELLLRWGADE L N+DG+TPA+ ++ +E+ + QRIHRMLARAPADRSWRRRGWLVLSR PTRV I + S++SIS+ G S KVA VSG+ SSRD EETEDQM+++LR LVGRLVGLEA+ +FRLVVGFL
Sbjct: 76 LLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMC-TNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICA-----LLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 269 bits (687), Expect = 1.520e-80 Identity = 171/240 (71.25%), Postives = 182/240 (75.83%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDYDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQE 720
LL AA +QMVRA LEAGATDDVNVRFGA QSAL VAAARGAE SC+ALMIAGADPNWIDYDDT QLP+ LHLA AAGHHRVVRV+LQ GAY+D K ++ E DAVAFLEG XXXXXXXXXXXXXXXXXXXXXXXDRCHPN DG+SP DIAAK GHATILK FLETGT VD ATD GWT LH A+ VD VI+DGAA RVLLEAGADVNA+E
Sbjct: 74 LLGEAARSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVVRVILQYGAYVDPKAIVNETPLHCAASKGHTSCVFELLMGGADMDAVAFLEGXXXXXXXXXXXXXXXXXXXXXXXXDRCHPNLDGFSPSDIAAKRGHATILKPFLETGTNVDAATDQYGWTALHSAACVDEPVIDDGAAARVLLEAGADVNARE 313
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 268 bits (685), Expect = 1.660e-78 Identity = 204/447 (45.64%), Postives = 245/447 (54.81%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDYDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEED---NIQRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSIS--------KGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL 1308
LL AAA G ++MVR L AGATDDVNV FG + ALMI GADPN D + +PLHLAA AGHHRVV +LL N A + +KT Q XXXXXXXXXXX A E R + +R SP +IAA G A ++K L+ + DATD GW LH A+S+DG V ++G AVRVLL AGADV+A+ T T L +A++ ++ S G AR DQTPLH+AC + A VELLLRWGAD+ LT + G TPA ++ +E+ + QRI RMLAR PA RSWRRRGWLVLSR PTRV+I NGS+ G S KVA VSGE SSRD EET D M+++LR LVGRL+ LEAD VFRLVVGFL
Sbjct: 76 LLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDR----RKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXX-----------------ALCISELLLGANSHLEAVQELLAAGANYSLRTNGSR---SPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIA----SDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQI--ANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 247 bits (631), Expect = 2.150e-67 Identity = 193/450 (42.89%), Postives = 234/450 (52.00%), Query Frame = 1
Query: 31 DQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDY-DDTG---QLPTPLH----------LAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEED---NIQRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSIS-----------KGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLV 1296
++MVR LL AGATDD NV FG +SALHV ARGAEDSC ALMIAGADP D DDT ++ T + +AA AGHHRV+ LL N A + +KT Q + A E RC +S D+AA GHA +L L+ + A SVDG V ++G AVR LL GADVNA+ T +PL +A+D ++ S G XXXXXXXXXXX D PLH+AC+ VELLLRWGADE LTN G TPA+ G++ +++ + QRI RM+A PADRSWRRRGWLVLSR PTRV+I NGS+ G + KVA VSGE SSRD E TE M+++LR LVGRLVGLEAD + RLV
Sbjct: 62 EKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAAS-----------------EGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIA----SDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQI--ANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 246 bits (628), Expect = 1.670e-65 Identity = 214/447 (47.87%), Postives = 262/447 (58.61%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDYDDTGQLPT-----PLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQ--ETGYGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEEDNIQRIH----RMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSISKGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL 1308
LL A A G ++MVRALLEAG T D NVRF A +SALHVAAAR DPN LP LH+AA GH RV+ +LL GA++D+KT + XXXXXXXXXXXXXXXXX VA P+ G+S A GHATI+K FLETG VD TD +T LH A+ +DGCV V VLLEAGADVNA+ + + Y TPL +A+D VS SI XXXXXXXXX E + TPLH+AC +AA V+LLL WGAD T +N +G+ PA+ H + ++++I+ H RMLARAPAD+SWRR GWLVLSR PTRV+I GS +S S CS K+A VSG+DSSRD +E E+QM+++ R L+ RLVGLEAD +FRL+VGFL
Sbjct: 76 LLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR--------------DPN---------LPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGG---------RPDNGGWSSLPNAVCCGHATIVKAFLETGIDVD-TTDDQAYTVLHRAADMDGCV------VHVLLEAGADVNAKTDQNSFLY-TPLHLAVDRRVS----SIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPAD-VIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSSNS--CSTKLARVSGKDSSRD-DELENQMMVDWRVLLDRLVGLEADGLFRLMVGFL 474
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 230 bits (586), Expect = 1.720e-63 Identity = 229/463 (49.46%), Postives = 270/463 (58.32%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDYDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETG-YGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSE-----EDNIQRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSI-----SKGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL*EP-NGVVWFFAPVAS 1353
LL AAAC + +++RALL AGA DVNV FGA+ +SALH+AAARGAE++ ALMIAGA+PN G XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX TI+K FL+T T + +ATDH G+T LH A+ ++ + G AVRVLL AGADV+A+ T + PL IA+ V S G R D+TPLH AC AAVELLLRWGADE LT+D TPA+ +G++ E + QRIH+MLARAPADRSWRRR WLVLSR PTRV+I N S +S+ S G S K+A SGEDS ETEDQM+++LRGLV RLVGLEAD +FRLVVGFL NGV++ P S
Sbjct: 78 LLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNL-----RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVP----STGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGT--SGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFLKRGRNGVLFTSLPQLS 529
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 219 bits (558), Expect = 6.870e-60 Identity = 215/444 (48.42%), Postives = 257/444 (57.88%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWID---YDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGY--GTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEED---NIQRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSISKGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL 1308
LL AAA G D++VRALLEAGA DDVNV FG +SALHVAAARGAE++ ALM+AGADPN D Y XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX +V D D G+T +H A + G +++GA VR+LLEAG VNA ETG + TPL A++ +++ D ++ A G+ TPLH+AC + AAVELLLRWGADET +ND+G+ PA+ G++++ED + +RI RMLARAPADRSWRRRGWLVLSR PTRV+I N + C KVA VSGED D EE E+QM ++ GLVG L+GLEAD +FRLVVGFL
Sbjct: 78 LLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEV---------DTGDDQGYTAIHCAVNRHG-PLDNGAVVRLLLEAGGGVNA-ETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTN----AHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQI--ANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.900e-56 Identity = 129/242 (53.31%), Postives = 161/242 (66.53%), Query Frame = 1
Query: 595 DATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEEDNI---QRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSIS-KGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL 1308
+AT+ G LH A+SV G V + G AVRVLL AG DVN T TPL +A+D +++ D +I A +R DQTPLH+ACK + VELLLRWGADE LTN+ G+ PA+ G++ +E++ QRI RML RAPADRSWRRRGWLVLSRY PTRV+I+ NGS++ S G S KVAT+SGED+ R EETED+++ +LR LV LVGLEADS+FRLVV FL
Sbjct: 36 NATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIAS-DGTIRALLEGADVD----SRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQID--NGSSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.860e-50 Identity = 210/436 (48.17%), Postives = 240/436 (55.05%), Query Frame = 1
Query: 1 LLAAAACGPDDQMVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWIDYDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEEAAYCHAGNMSEEDNIQRIHRMLARAPADRSWRRRGWLVLSRYHPTRVEIEIVNGSNNSISKGCSNKVATVSGEDSSRDVEETEDQMVIELRGLVGRLVGLEADSVFRLVVGFL 1308
LL AAA G D+MVR LL AGAT AARGA+DSC A M+AGADP+ D G +PLHLAA A HHRV +LL G+ + +KT + XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX R N SP ++AA GH + LH A+ V ++G AVR LL AGADVN + T TPL +A ++ S G A E D+TPLH AC A VELLL WGADE LTND G+TPA+ RSWRRRGWLVLSRY TRV I N S++S KVA SGED+ R EET DQM+++LR LVGRLVGLEA +FRLVVGFL
Sbjct: 19 LLGAAAYG--DKMVRTLLSAGAT------------------AARGADDSCRAFMVAGADPSLRDR--VGH--SPLHLAAVARHHRVAGMLLLKGSDVVAKTAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHRMLSNNTR-SPLEVAANGGHGNVA--------------------ALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIA----SDGTIRALLEGGANINACTE-DETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPAD-------------------------VIGTRSWRRRGWLVLSRYCQTRVNI--ANRSSSSGXXXXXAKVARASGEDAGRRDEETADQMMVDLRDLVGRLVGLEAGGLFRLVVGFL 377
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Match: D7G6Z8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z8_ECTSI) HSP 1 Score: 181 bits (458), Expect = 9.340e-48 Identity = 155/301 (51.50%), Postives = 177/301 (58.80%), Query Frame = 1
Query: 160 MIAGADPNWIDYDDTGQLPTPLHLAAAAGHHRVVRVLLQNGAYIDSKTLIQEXXXXXXXXXXXXXXXXXXXXXXXXXDAVAFLEGEXXXXXXXXXXXXXXXXXXXXXXXDRCHPNRDGYSPFDIAAKNGHATILKVFLETGTKVDDATDHNGWTTLHIASSVDGCVINDGAAVRVLLEAGADVNAQETGYGYGTPLLIALDWSVSNGDVSIGAXXXXXXXXXXXXARGERDQTPLHMACKQWDAAAVELLLRWGADETLTNDDGNTPAEE-AAYCHAGNM--SEEDNIQRIHRMLARAPAD 1053
MIAGADPN +D +PLHLAA AGHHRVVRV+L XXXXXXXXXXXXXXXXXXXXXXXXXD G D P Y PFDIAA+ GHA ILK FLETGT+V A D NGWT LH A+S + N G +RVLLEAG +VNA+ T TPL + +D+ V+ S+G AR ERDQTPLH+A + + AAVELLLR G DE LTNDDG+TPA+ A HAG+M +E DN QRI RMLARAPAD
Sbjct: 1 MIAGADPNVLDIGKR----SPLHLAAEAGHHRVVRVILLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAGSFLGTTPLVQRGRKQPPRCRQEALTAGADSRRPTLGHYFPFDIAARRGHANILKAFLETGTEVV-AADGNGWTALHGAASGIPSLDNRGT-IRVLLEAGVNVNAKATCRSLYTPLHLTVDYRVA----SVGMVGALLEGGADVNARAERDQTPLHVAGGRSNVAAVELLLRCGVDEKLTNDDGDTPADVIGAADHAGHMVDNEADN-QRILRMLARAPAD 290 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig141.2995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig141.2995.1 >prot_E-fasciculatus_F_contig141.2995.1 ID=prot_E-fasciculatus_F_contig141.2995.1|Name=mRNA_E-fasciculatus_F_contig141.2995.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=425bp MVRALLEAGATDDVNVRFGAREQSALHVAAARGAEDSCNALMIAGADPNWback to top mRNA from alignment at E-fasciculatus_F_contig141:2..2870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig141.2995.1 ID=mRNA_E-fasciculatus_F_contig141.2995.1|Name=mRNA_E-fasciculatus_F_contig141.2995.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2869bp|location=Sequence derived from alignment at E-fasciculatus_F_contig141:2..2870+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig141:2..2870+ >mRNA_E-fasciculatus_F_contig141.2995.1 ID=mRNA_E-fasciculatus_F_contig141.2995.1|Name=mRNA_E-fasciculatus_F_contig141.2995.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2550bp|location=Sequence derived from alignment at E-fasciculatus_F_contig141:2..2870+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |