mRNA_E-fasciculatus_F_contig13976.2911.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13976.2911.1
Unique NamemRNA_E-fasciculatus_F_contig13976.2911.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: A0A6H5JI06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI06_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 1.010e-134
Identity = 231/269 (85.87%), Postives = 237/269 (88.10%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXX-------LWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGLRSTGAAATTTAPTSSQNSAKAGT 786
            IAADATTPGHAVTSLGSTLAVKMLSERRVEDAS GVYSHRLGNAG+ RGA  AK+E S+QNQQGRRE G  G +XXXXXXXX       LWLVGGASNVGCAVLRVEGFEAS      SSELE RSSDIDPSTDSPL YYPLQRGTVGERFPTNDPLK SILEPRP+NRTEYLHGLLQAIARVESEGYA LEALGAT+LNRVDTAGGGAVNPTW AMRQRMLGVPTGKATNTDAAYGCALLAMQGLRSTGAA  TT PTSSQNSA  GT
Sbjct:  389 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASLGVYSHRLGNAGKVRGAATAKVEESNQNQQGRRERGSNGVDXXXXXXXXXXXXXXDLWLVGGASNVGCAVLRVEGFEASI-----SSELEARSSDIDPSTDSPLKYYPLQRGTVGERFPTNDPLKKSILEPRPENRTEYLHGLLQAIARVESEGYAALEALGATRLNRVDTAGGGAVNPTWMAMRQRMLGVPTGKATNTDAAYGCALLAMQGLRSTGAAVATTTPTSSQNSANGGT 652
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: D7FVM2_ECTSI (Carbohydrate kinase, FGGY n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM2_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 4.680e-112
Identity = 189/228 (82.89%), Postives = 193/228 (84.65%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXX---------LWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPT 657
            IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRG   AK+E  +QNQQGRRE G  G N    XXXX         LWLVGGASNVGCAVLRVEGFE        SSELE RSSDIDPSTDSPL+YYPLQRGTVGERFPTNDPLK SILEPRP+NRTEYLHGLL AIARVESEGYA LEALGATKLNRVDTAGGGAVNPTW AMRQRMLGVPT
Sbjct:  247 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGPANAKVEEINQNQQGRREGGSDGVNADDAXXXXXXXXXXXXXLWLVGGASNVGCAVLRVEGFE--------SSELEARSSDIDPSTDSPLEYYPLQRGTVGERFPTNDPLKKSILEPRPENRTEYLHGLLHAIARVESEGYAALEALGATKLNRVDTAGGGAVNPTWMAMRQRMLGVPT 466
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: A0A2A2TKH6_9CYAN (Carbohydrate kinase n=1 Tax=Calothrix elsteri CCALA 953 TaxID=987040 RepID=A0A2A2TKH6_9CYAN)

HSP 1 Score: 201 bits (511), Expect = 1.290e-58
Identity = 123/238 (51.68%), Postives = 146/238 (61.34%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQG 714
            +A+ A TPG AVTSLGSTLAVK+LS   VED+  G+YSHR  N G          E + Q +                    LWLVGGASN G AVLR          +  ++ELE  S +IDP   S LDYYPL +   GERFP ND      LEPRP+N  E+LHGLL++IAR+E+ GY +L+ LGA KLN V TAGGGA NPTWTA+RQR L VP   + NT+AAYG ALLAMQG
Sbjct:  229 LASGAKTPGEAVTSLGSTLAVKLLSRTYVEDSRYGIYSHRFPNFG---------QETNKQEKD-------------------LWLVGGASNTGGAVLR---------HFFSNAELESLSREIDPGKISELDYYPLLK--AGERFPINDANLQPQLEPRPENNAEFLHGLLESIARIEARGYELLQELGADKLNWVYTAGGGAANPTWTAIRQRYLKVPVKSSVNTEAAYGSALLAMQG 427
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: UPI0019E6D3FB (FGGY-family carbohydrate kinase n=1 Tax=Nostocales cyanobacterium LEGE 11386 TaxID=1828825 RepID=UPI0019E6D3FB)

HSP 1 Score: 197 bits (502), Expect = 2.210e-57
Identity = 118/239 (49.37%), Postives = 145/239 (60.67%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGL 717
            +A+ A +PG AVTSLGSTLAVK+LS  RVEDA  G+YSHRLG+                                       LWL GGASN G AVL+          +   +ELE+ SS+ID +  S LDYYPL     G+RFP NDP  +  LEPRPDN  E+LHGLL++IAR+E +GY +L+ +GA KL RV TAGGGA N TWTA+RQR L VP   + NT+AAYG ALLAM+G+
Sbjct:  228 VASGAKSPGEAVTSLGSTLAVKLLSRTRVEDARYGIYSHRLGD---------------------------------------LWLTGGASNTGGAVLK---------NFFSEAELEKLSSEIDGTIASELDYYPLL--VAGDRFPINDPYLSPQLEPRPDNPVEFLHGLLESIARIEGQGYELLQQMGADKLTRVYTAGGGAANSTWTAIRQRYLKVPVVASENTEAAYGSALLAMRGI 416
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: W7TDC3_9STRA (Carbohydrate fggy n=4 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDC3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.330e-57
Identity = 121/238 (50.84%), Postives = 146/238 (61.34%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSP-LDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQ 711
            IAA    PG AVTSLGSTLA+KMLS + VEDA+RGVYSHRLGN                                        WLVGGASNVGCAVLR EGF         + ELE  S +IDP      L+YYPL  G  GERFP+ DP K ++L PRP  R+EYL G+L+ IARVE +GY +L+ LGA +L  V TAGGGA N  WT +R+++LGVPTGKA+ T+A+YG ALLA++
Sbjct:  303 IAAGLQEPGQAVTSLGSTLAIKMLSNKAVEDATRGVYSHRLGNQ---------------------------------------WLVGGASNVGCAVLRQEGFS--------NPELERLSQEIDPRRPCRHLNYYPLA-GDAGERFPSCDPSKKALLTPRPPRRSEYLQGILEGIARVERDGYQILKDLGADELVEVRTAGGGARNKVWTRIRRQLLGVPTGKASETEASYGAALLALK 492
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: UPI00071FB9FB (FGGY-family carbohydrate kinase n=3 Tax=Nostocaceae TaxID=1162 RepID=UPI00071FB9FB)

HSP 1 Score: 197 bits (500), Expect = 4.280e-57
Identity = 118/239 (49.37%), Postives = 144/239 (60.25%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGL 717
            +A+ A +PG AVTSLGSTL +K+LS  RVEDA  G+YSHRLG+                                       LWL GGASN G AVLR          +  ++ELE  S +ID S  SPLDYYPL +  VG+RFP NDP     L PRPDN  E+LHGLL++IAR+E++GY +L+  GA  L +V TAGGGA NPTWTA+RQR L VP   +TNT+AAYG ALLA +GL
Sbjct:  227 LASGAKSPGEAVTSLGSTLVLKLLSRTRVEDARYGIYSHRLGD---------------------------------------LWLTGGASNTGGAVLR---------EFFTNAELENLSREIDASKASPLDYYPLLK--VGDRFPINDPNLPPRLTPRPDNPVEFLHGLLESIARIETQGYGLLQKFGADSLTQVYTAGGGAKNPTWTAIRQRNLKVPVTSSTNTEAAYGTALLAQRGL 415
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: A0A1Z4IE07_9NOSO (Putative sugar kinase, FGGY family protein n=1 Tax=Nostoc sp. NIES-2111 TaxID=1973475 RepID=A0A1Z4IE07_9NOSO)

HSP 1 Score: 196 bits (497), Expect = 1.200e-56
Identity = 117/239 (48.95%), Postives = 144/239 (60.25%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGL 717
            +A+ A +PG AVTSLGSTL +K+LS  RVED+  G+YSHRLG+                                       LWL GGASN G AVLR          +  ++ELE  S +ID S  SPLDYYPL +  VG+RFP NDP     L PRPDN  E+LHGLL++IAR+E++GY +L+  GA  L +V TAGGGA NPTWTA+RQR L VP   +TNT+AAYG ALLA +GL
Sbjct:  227 LASGAKSPGEAVTSLGSTLVLKLLSRTRVEDSRYGIYSHRLGD---------------------------------------LWLTGGASNTGGAVLR---------EFFTNAELENLSREIDASKASPLDYYPLLK--VGDRFPINDPNLPPRLTPRPDNPVEFLHGLLESIARIETQGYGLLQKFGADSLTQVYTAGGGAKNPTWTAIRQRNLKVPVTSSTNTEAAYGTALLAQRGL 415
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BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: A0A2I8ACE9_9NOSO (Carbohydrate kinase n=2 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A2I8ACE9_9NOSO)

HSP 1 Score: 195 bits (496), Expect = 1.770e-56
Identity = 119/241 (49.38%), Postives = 143/241 (59.34%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGLRS 723
            +A+ AT+PG  VTSLGSTL +K+LS  RVEDA  G+YSHRLG+                                       LWL GGASN G AVLR          +    ELE  S +ID S  S LDYYPL +   G+RFP NDP     L PRPDN  E+LHGLL++IAR+E+ GY +L+ LGA  LNRV TAGGGA NPTWTA+RQR L VP   ++NT+AAYG ALLAM+G+ S
Sbjct:  227 LASGATSPGETVTSLGSTLVLKLLSRTRVEDARYGIYSHRLGD---------------------------------------LWLTGGASNTGGAVLR---------EFFTDVELENLSREIDSSQPSKLDYYPLLK--AGDRFPINDPNLPPKLTPRPDNPVEFLHGLLESIARIENRGYELLQQLGADSLNRVYTAGGGAKNPTWTAIRQRCLKVPVVTSSNTEAAYGTALLAMRGVGS 417
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: UPI001857EAB4 (Carbohydrate kinase n=1 Tax=Anabaena sp. TaxID=1167 RepID=UPI001857EAB4)

HSP 1 Score: 195 bits (495), Expect = 2.800e-56
Identity = 119/243 (48.97%), Postives = 145/243 (59.67%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGLRSTG 729
            +A+ AT+PG AVTSLGSTL +K+LS  R+EDA  G+YSHRLG+                                       LWL GGASN G AVLR          +   +ELE  S +ID S  S LDYYPL   T G+RFP NDP     L PRP+N  E+LHGLL++IAR+E+ GY +L+ LGA  LN+V TAGGGA N TWTA+RQR L VP   + NT+AAYG ALLAM+G+ STG
Sbjct:  227 LASGATSPGEAVTSLGSTLVLKLLSRTRIEDARYGIYSHRLGD---------------------------------------LWLTGGASNTGGAVLR---------EFFTDAELENLSREIDSSQGSELDYYPLL--TTGDRFPINDPNLPPRLTPRPENPVEFLHGLLESIARIETRGYELLQHLGADNLNQVYTAGGGAKNLTWTAIRQRCLKVPVVSSVNTEAAYGSALLAMRGVLSTG 419
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Match: UPI0016811F1F (FGGY-family carbohydrate kinase n=1 Tax=Anabaena subtropica TaxID=425380 RepID=UPI0016811F1F)

HSP 1 Score: 194 bits (493), Expect = 4.700e-56
Identity = 117/239 (48.95%), Postives = 145/239 (60.67%), Query Frame = 1 
Query:    1 IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGATIAKMEASDQNQQGRREDGGKGANXXXXXXXXLWLVGGASNVGCAVLRVEGFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPLKASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGGGAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGL 717
            +A+ A +PG AVTSLGSTL +K+LS  RVEDA  G+YSHRLG+                                       LWL GGASN G AVL         Q +   +ELE  S +IDP+  S LDYYPL R  VG+RFP NDP  +  L PRPDN  E+LHGLL++IAR+E++GY +L+ LGA  L++V TAGGGA NPTWTA+RQR L V    + NT+AAYG ALLAM+G+
Sbjct:  226 LASGAKSPGEAVTSLGSTLVLKLLSHTRVEDARYGIYSHRLGD---------------------------------------LWLTGGASNTGGAVL---------QEFFTDAELENLSHEIDPTKASELDYYPLLR--VGDRFPINDPNLSPRLTPRPDNPVEFLHGLLESIARIETQGYELLQKLGADSLDQVYTAGGGAKNPTWTAIRQRHLKVSVVSSVNTEAAYGTALLAMKGV 414
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13976.2911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI06_9PHAE1.010e-13485.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM2_ECTSI4.680e-11282.89Carbohydrate kinase, FGGY n=1 Tax=Ectocarpus silic... [more]
A0A2A2TKH6_9CYAN1.290e-5851.68Carbohydrate kinase n=1 Tax=Calothrix elsteri CCAL... [more]
UPI0019E6D3FB2.210e-5749.37FGGY-family carbohydrate kinase n=1 Tax=Nostocales... [more]
W7TDC3_9STRA2.330e-5750.84Carbohydrate fggy n=4 Tax=Nannochloropsis gaditana... [more]
UPI00071FB9FB4.280e-5749.37FGGY-family carbohydrate kinase n=3 Tax=Nostocacea... [more]
A0A1Z4IE07_9NOSO1.200e-5648.95Putative sugar kinase, FGGY family protein n=1 Tax... [more]
A0A2I8ACE9_9NOSO1.770e-5649.38Carbohydrate kinase n=2 Tax=unclassified Nostoc Ta... [more]
UPI001857EAB42.800e-5648.97Carbohydrate kinase n=1 Tax=Anabaena sp. TaxID=116... [more]
UPI0016811F1F4.700e-5648.95FGGY-family carbohydrate kinase n=1 Tax=Anabaena s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13976contigE-fasciculatus_F_contig13976:306..3465 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.8e-91
Seed eggNOG ortholog2880.D7FVM2
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019150,GO:0019200,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363
EggNOG free text desc.FGGY family of carbohydrate kinases, C-terminal domain
EggNOG OGs2QVMB@2759,COG1070@1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size791
Cds size789
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13976.2911.1prot_E-fasciculatus_F_contig13976.2911.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13976 306..3465 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927887.8621118-CDS-E-fasciculatus_F_contig13976:305..4361622927887.8621118-CDS-E-fasciculatus_F_contig13976:305..436Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 306..436 -
1695995739.25622-CDS-E-fasciculatus_F_contig13976:305..4361695995739.25622-CDS-E-fasciculatus_F_contig13976:305..436Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 306..436 -
1622927887.8751454-CDS-E-fasciculatus_F_contig13976:1437..15711622927887.8751454-CDS-E-fasciculatus_F_contig13976:1437..1571Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 1438..1571 -
1695995739.266589-CDS-E-fasciculatus_F_contig13976:1437..15711695995739.266589-CDS-E-fasciculatus_F_contig13976:1437..1571Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 1438..1571 -
1622927887.8872392-CDS-E-fasciculatus_F_contig13976:2257..24481622927887.8872392-CDS-E-fasciculatus_F_contig13976:2257..2448Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 2258..2448 -
1695995739.274897-CDS-E-fasciculatus_F_contig13976:2257..24481695995739.274897-CDS-E-fasciculatus_F_contig13976:2257..2448Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 2258..2448 -
1622927887.901822-CDS-E-fasciculatus_F_contig13976:2895..31501622927887.901822-CDS-E-fasciculatus_F_contig13976:2895..3150Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 2896..3150 -
1695995739.2850888-CDS-E-fasciculatus_F_contig13976:2895..31501695995739.2850888-CDS-E-fasciculatus_F_contig13976:2895..3150Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 2896..3150 -
1622927887.9179711-CDS-E-fasciculatus_F_contig13976:3387..34651622927887.9179711-CDS-E-fasciculatus_F_contig13976:3387..3465Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 3388..3465 -
1695995739.2929244-CDS-E-fasciculatus_F_contig13976:3387..34651695995739.2929244-CDS-E-fasciculatus_F_contig13976:3387..3465Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13976 3388..3465 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13976.2911.1

>prot_E-fasciculatus_F_contig13976.2911.1 ID=prot_E-fasciculatus_F_contig13976.2911.1|Name=mRNA_E-fasciculatus_F_contig13976.2911.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=263bp
IAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGA
TIAKMEASDQNQQGRREDGGKGANADADADADLWLVGGASNVGCAVLRVE
GFEASRQTWIPSSELEERSSDIDPSTDSPLDYYPLQRGTVGERFPTNDPL
KASILEPRPDNRTEYLHGLLQAIARVESEGYAVLEALGATKLNRVDTAGG
GAVNPTWTAMRQRMLGVPTGKATNTDAAYGCALLAMQGLRSTGAAATTTA
PTSSQNSAKAGT*
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mRNA from alignment at E-fasciculatus_F_contig13976:306..3465-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13976.2911.1 ID=mRNA_E-fasciculatus_F_contig13976.2911.1|Name=mRNA_E-fasciculatus_F_contig13976.2911.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3160bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13976:306..3465- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATCGCCGCAGACGCCACTACCCCCGGCCACGCGGTCACCAGCCTCGGCAG
CACCCTCGCCGTCAAGATGCTCAGCGAGGTATATCTCCATATACCGCCGT
ACCGTACCGTAGGACGAGGTATGGTTTGTCCTCTTGCTTTGTTCCTTCGC
AAGTTGTCCTCGTTTTCTTATTTTTTTTTCCTCCGCGGCGGTGCCCCCCG
TCCCCGTGACCGAGGCCTGCCGTCCGAGTGCTGACCGCCTTCTGTATCCG
TGATCGTCTAAACACTGCTGGTCGCGTGTGTCGTACGTCGATATGCGTGC
ACGCATCGTCCGCAGCGTCGCGTGGAAGACGCATCGCGAGGGGTCTACAG
CCACCGCTTGGGCAACGCCGGCAGAGATCGAGGGGCCACCATCGCCAAGA
TGGAGGCAAGCGATCAGAACCAGCAGGGGCGACGAGAAGACGGTGGCAAG
GGTGCCAACGCCGATGCGGACGCAGATGCCGACCTGTGGTTGGTGGGAGG
GGCGTCGAACGTCGGGTGTGCGGTCCTTAGGGTCGAGGGCTTCGAGGCGA
GTAGGCAAACATGGATACCTGTGTAAAGCATGCGTCTTGAGCTGAAAGCG
GGTCGGTCGTTGGTTCCGATGCCACATAGAAGCAGAGAGGCGATGCGGTG
TGTTGCTTTTGTGAAGTGGTTTCGTCCATTTTATTGTTTCGTTTCGTTTG
CTCATCCCATATATTTTCTTCAGAACAATTGCTCTCTGTATGTAATGACC
ACGGATTATGTTCTTGAGGTGGAGAGGCAAGACCGGACGGTGGGCAAGGT
GTAATCCGGTGATCAGATGGAGTTGACAAAGTGTGTGCATGTATGCTTTC
TCTGTAGCAGCAATCTTAACACTATCTCCGTCTTTGAGCCACCGGTCCCG
CGGGGGTCTCAATGAAACCCCCCGGTCAGCTTGAACGAACTGACCTCTTC
CCCTCTCTTTCCCGCTCCTCCCCCCTGCATGCCAACTCGCCCCGCCCCCC
CCCCCGCGGAAACAAAGTCGTCGGAGCTTGAGGAACGAAGTAGCGACATC
GATCCGTCTACGGACTCCCCGTTGGACTACTACCCCTTGCAGAGGGGCAC
CGTTGGGGAGAGGTTTCCAACCAACGACCCCCTCAAGGCGTCGATCTTGG
AGCCAAGGCCGGACAACCGAACGGAGTATTTGCATGGCTTGCTTCAAGCC
ATCGCCAGGTAAAGAGAAATAGCTAAATAGTAGCGGTGTCAAGAGATTGG
GGAGGAAACTGCCTATGGCGGTTTCATGTGTGGTTAAGTCCGGGGCTGAG
GCGACCATGCAACTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCGCTCTCGCTCTCTCTCGCGTGCTATTGATAATTATTTTCTT
GGTTTGCACCTCAACCCATTCCCCACTCTAGCACCCGCACAACCACGGGC
CTCTTCGGCGAAGTTGTTCCTGTTCCTGTTGCTGTCCATGTTGTTGTCGT
CGTTGTTGTTGCTGCTGGTCGTGTCGGTGCTGTCCTTTGGGAGCCAGGGC
GGTTGCTGTGTCGGTGTGTGCTCATCCCTGAAGAAAGACGGTTGCGGTCG
CCGTCGCCGCCTCGCCAAATATCCCAACAGCAACAGAGCATAGTTTTGTC
GTGCAGTGATTCGTCAAACCCAACAACCAGCATCGCGAGAGGAAACCTAT
CGCTGACGGCGAAACAGATTTCTCTTGCGATGCTGGTTGTGTCGAGCTCG
CTCTAACCTTTTCAAGAAAAAATACAAATACAAACACAGAAAGACTACCC
GTTCGAGATATTAACCTTTTTGATGAGTGGTACGATAACGATAACATCTT
GCTTAAATTTTACCGTGCTCCCCTCGCGGACGGCGGCCCCGCAGAGTGGA
GAGCGAGGGGTACGCGGTTCTCGAGGCCCTCGGCGCGACGAAGCTCAACA
GGGTGGACACGGCAGGGGGCGGTGCGGTGAATCCCACGTGGACGGCGATG
CGGCAGCGGATGCTCGGAGTCCCCACCGGTGCGTTTAACGGAACAACCTG
GGTGGAGCGCTAACGCCCTTGTATGTGTGTGTGTGTATTGAGGTTGGCAT
CAACTGCGCTATTTAGCCGGCTGACCAATAAAAATACGTCAGTCGTCTCG
TTGCGAGATTAACATATGCACACGTGTGTTTGTGAAAGGGACGAGCTAGC
TCGGTGTCCCTTCTCTCATCTTCACCACGGCTTTTCTCGATATATTTTCG
ATGGTTTCATGATTTTGCCTTGGACTGGCGTAACCGTTTTCCTGTGCCGT
CGTTTCGAGTGTGTCGACACCCAACGTTGCTCATGCGACGAGAGCCGGAT
CGATCTCGATGGGCGCCAAAAGACGTGTCAACGTGAAATACTGGTTCTGC
TAGACACCCTTTAGACAACCCTAGGGCCCGGGTGTCCTTGTCTGGAGACG
AAGACGTGTTGCTGTTACAACTCAAGAGGTCCATGGAGTAGGAGTAAACG
ATGCCCTTTCTCAGCACGGAGTACTTTTCGTTCCTGCATTTTAAGTATCT
CTGCGGGTAGACCCTGCAACTGCCAACCAGTAGAGCGTAGGCGTATGTAT
CTTGGGTGTCTTCGGCATCGGGCCGTCTCTTGGTCATCTTGGCGTTCCCT
CCCCACTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AAAGAGAGCCCCGTTGTTCTTCTTCATCCCGCACATGACGGGTGCGTCGC
GGACACCGTAGCAATGCGGTGTACAACTACACTTGCCTCCTCGGTCCCCC
AGAGCCCTACCTCGGCCCCTGGCACACCGATTATTTTCTGTCAAGTAGTG
TACGTCAAATCACAAAGCGGACTTATACAAGTGGTATCGGGCGCGCGCCG
CTGTTGTATGTGTGAACGGCCCCCATTCTCGAGTTGTAGGGATGCTGCGG
GGTTTTCATGACCACATGATGAGGCAAGCAACTGCCAAAGAACCACACAA
GCCTCCCCCACCGCCCGCCCCCCCCGCAGGCAAAGCCACCAACACCGATG
CGGCGTACGGCTGCGCGCTACTAGCGATGCAAGGCCTTCGAAGCACGGGC
GCCGCCGCTACCACTACCGCCCCGACATCGTCACAAAATTCGGCAAAAGC
TGGCACATAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13976:306..3465-

>mRNA_E-fasciculatus_F_contig13976.2911.1 ID=mRNA_E-fasciculatus_F_contig13976.2911.1|Name=mRNA_E-fasciculatus_F_contig13976.2911.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1578bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13976:306..3465- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATCGCCGCAGACGCCACTACCCCCGGCCACGCGGTCACCAGCCTCGGCAG
CACCCTCGCCGTCAAGATGCTCAGCGAGATCGCCGCAGACGCCACTACCC
CCGGCCACGCGGTCACCAGCCTCGGCAGCACCCTCGCCGTCAAGATGCTC
AGCGAGCGTCGCGTGGAAGACGCATCGCGAGGGGTCTACAGCCACCGCTT
GGGCAACGCCGGCAGAGATCGAGGGGCCACCATCGCCAAGATGGAGGCAA
GCGATCAGAACCAGCAGGGGCGACGAGAAGACGGTGGCAAGGGTGCCAAC
GCCGATGCGGACGCAGATGCCGACCTGTGGTTGGTGGGAGGGGCGTCGAA
CGTCGGGTGTGCGGTCCTTAGGGTCGAGGGCTTCGAGGCGAGTAGGCAAA
CATGGATACCTCGTCGCGTGGAAGACGCATCGCGAGGGGTCTACAGCCAC
CGCTTGGGCAACGCCGGCAGAGATCGAGGGGCCACCATCGCCAAGATGGA
GGCAAGCGATCAGAACCAGCAGGGGCGACGAGAAGACGGTGGCAAGGGTG
CCAACGCCGATGCGGACGCAGATGCCGACCTGTGGTTGGTGGGAGGGGCG
TCGAACGTCGGGTGTGCGGTCCTTAGGGTCGAGGGCTTCGAGGCGAGTAG
GCAAACATGGATACCTTCGTCGGAGCTTGAGGAACGAAGTAGCGACATCG
ATCCGTCTACGGACTCCCCGTTGGACTACTACCCCTTGCAGAGGGGCACC
GTTGGGGAGAGGTTTCCAACCAACGACCCCCTCAAGGCGTCGATCTTGGA
GCCAAGGCCGGACAACCGAACGGAGTATTTGCATGGCTTGCTTCAAGCCA
TCGCCAGTCGTCGGAGCTTGAGGAACGAAGTAGCGACATCGATCCGTCTA
CGGACTCCCCGTTGGACTACTACCCCTTGCAGAGGGGCACCGTTGGGGAG
AGGTTTCCAACCAACGACCCCCTCAAGGCGTCGATCTTGGAGCCAAGGCC
GGACAACCGAACGGAGTATTTGCATGGCTTGCTTCAAGCCATCGCCAGAG
TGGAGAGCGAGGGGTACGCGGTTCTCGAGGCCCTCGGCGCGACGAAGCTC
AACAGGGTGGACACGGCAGGGGGCGGTGCGGTGAATCCCACGTGGACGGC
GATGCGGCAGCGGATGCTCGGAGTCCCCACCGAGTGGAGAGCGAGGGGTA
CGCGGTTCTCGAGGCCCTCGGCGCGACGAAGCTCAACAGGGTGGACACGG
CAGGGGGCGGTGCGGTGAATCCCACGTGGACGGCGATGCGGCAGCGGATG
CTCGGAGTCCCCACCGGCAAAGCCACCAACACCGATGCGGCGTACGGCTG
CGCGCTACTAGCGATGCAAGGCCTTCGAAGCACGGGCGCCGCCGCTACCA
CTACCGCCCCGACATCGTCACAAAATTCGGCAAAAGCTGGCACATAGGCA
AAGCCACCAACACCGATGCGGCGTACGGCTGCGCGCTACTAGCGATGCAA
GGCCTTCGAAGCACGGGCGCCGCCGCTACCACTACCGCCCCGACATCGTC
ACAAAATTCGGCAAAAGCTGGCACATAG
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