mRNA_E-fasciculatus_F_contig13966.2905.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13966.2905.1
Unique NamemRNA_E-fasciculatus_F_contig13966.2905.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.680e-82
Identity = 164/176 (93.18%), Postives = 167/176 (94.89%), Query Frame = 1 
Query:   22 RESGGEGVGDEESDGEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGIPREDGEGTDLMDIEVHMNTIDPSQATSAGSAPRTRGGAKRSHSGTSTSPSHHTPAAGTGXXXXXXXXXXXXXXXXTAVVMGEREGLRARN 549
            RE GGEGVGDEESDGEDSEGLCLPGTEQTGRWTKAEHELFL+ALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGI  EDGEG DLMDIEVHMNTIDPSQAT+AGSAPRTRGGAKRS +GTSTSPS H PAAGTGXXXXXXXXXXXXXXX  AVVMGEREGLRARN
Sbjct:  720 REDGGEGVGDEESDGEDSEGLCLPGTEQTGRWTKAEHELFLRALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMNTIDPSQATNAGSAPRTRGGAKRSRAGTSTSPSQHPPAAGTGXXXXXXXXXXXXXXX--AVVMGEREGLRARN 893
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.440e-45
Identity = 95/128 (74.22%), Postives = 96/128 (75.00%), Query Frame = 1 
Query:   64 GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGIPREDGEGTDLMDIEVHMNTIDPSQATSAGSAPRTRGGAKRSHSGTSTSPSHHTPAA 447
            GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAA                            ATSAGSAPRTRGGAKRS +GTST PS H PAA
Sbjct:  212 GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAA----------------------------ATSAGSAPRTRGGAKRSRAGTSTXPSQHPPAA 311
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A835YHT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.050e-28
Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 1 
Query:   49 DEESDGEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAG 270
            D++  G   +G+C PGTEQTGRWTK EH+LFLKAL  YGKEWKRVA MV TRTVVQTRTHAQKYFQKL K + G
Sbjct:   10 DDDDMGGSVQGVCAPGTEQTGRWTKGEHDLFLKALGVYGKEWKRVAAMVGTRTVVQTRTHAQKYFQKLQKTSGG 83
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A7S3HM63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM63_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.080e-22
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:   64 GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKA 261
            G+D  G    G E TGRWT+ EHELFL+ALKKYGKEWK+VA MV+TRTVVQTRTHAQKYFQKLTK+
Sbjct:    4 GDDEPGTVPSGHESTGRWTRPEHELFLQALKKYGKEWKKVAGMVKTRTVVQTRTHAQKYFQKLTKS 69
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 5.580e-21
Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 1 
Query:   58 SDGEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGIPREDGEGTDLMDIEVHMNTID 342
            SD  D+EG+C PG E TGRWT  EH LFL+ L+ +GK WK++A +++TRTVVQ RTHAQKYFQKL+KA A G         T  +D    M+T+D
Sbjct:   15 SDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG---------TSHLDPATLMSTMD 100
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: W7TIJ3_9STRA (SANT/Myb domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIJ3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.600e-19
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:   82 LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGG 273
            +C PG E TGRW++ EH+ F+  LKK+GKEWKRVA  V TRTVVQTRTHAQKYFQKL K  A G
Sbjct:   53 VCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTRTVVQTRTHAQKYFQKLQKHMANG 116
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO)

HSP 1 Score: 95.9 bits (237), Expect = 2.480e-19
Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 1 
Query:   94 GTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGG---IPREDGEGT 303
            G E TGRWTKAEHE FL  LK YGKEWK+VA  V+TRTVVQTRTHAQKYFQKL K A   G   + R D  GT
Sbjct:  117 GKEHTGRWTKAEHEAFLAGLKMYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLHKTAEDSGNDYVSRADVGGT 189
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A836C952_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C952_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.490e-19
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 1 
Query:  100 EQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTK 258
            E TGRWTKAEH+LF+KAL  YG+EW+ +A MV TRTVVQTRTHAQKYFQKL +
Sbjct:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A4D9CLC8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLC8_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.500e-18
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:   82 LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGG 273
            +C PG E TGRW++ EH+ F+  LKK+GKEWKRVA  V TRTVVQTRTHAQKYFQKL K  A G
Sbjct:  219 VCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTRTVVQTRTHAQKYFQKLQKQMANG 282
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.580e-18
Identity = 46/63 (73.02%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:   82 LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAG 270
            L   G EQTGRWTK EHE FL  +K YGKEWK+VA  V+TRTVVQTRTHAQKYFQKL KA  G
Sbjct:   99 LVETGQEQTGRWTKDEHEAFLIGIKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLAKANEG 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13966.2905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG60_ECTSI1.680e-8293.18Histone deactylase of possible bacterial origin wi... [more]
A0A6H5K5H7_9PHAE3.440e-4574.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHT8_9STRA5.050e-2872.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3HM63_9STRA5.080e-2275.76Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D8LE34_ECTSI5.580e-2153.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TIJ3_9STRA1.600e-1968.75SANT/Myb domain protein n=1 Tax=Nannochloropsis ga... [more]
A0A1Z5JSY0_FISSO2.480e-1968.49Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A836C952_9STRA2.490e-1975.47Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A4D9CLC8_9STRA1.500e-1868.75Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A448YY97_9STRA1.580e-1873.02Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13966contigE-fasciculatus_F_contig13966:26..2667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score279.6
Seed ortholog evalue1.2e-72
Seed eggNOG ortholog2880.D8LG60
EggNOG free text desc.NAD-dependent histone deacetylase activity (H3-K14 specific)
EggNOG OGsCOG0123@1,COG0666@1,KOG0724@1,KOG0724@2759,KOG1343@2759,KOG4177@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size626
Cds size624
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13966.2905.1prot_E-fasciculatus_F_contig13966.2905.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13966 28..2667 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927887.211272-CDS-E-fasciculatus_F_contig13966:27..691622927887.211272-CDS-E-fasciculatus_F_contig13966:27..69Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 28..69 -
1695995738.9590528-CDS-E-fasciculatus_F_contig13966:27..691695995738.9590528-CDS-E-fasciculatus_F_contig13966:27..69Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 28..69 -
1622927887.2272122-CDS-E-fasciculatus_F_contig13966:353..5841622927887.2272122-CDS-E-fasciculatus_F_contig13966:353..584Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 354..584 -
1695995738.969462-CDS-E-fasciculatus_F_contig13966:353..5841695995738.969462-CDS-E-fasciculatus_F_contig13966:353..584Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 354..584 -
1622927887.2442575-CDS-E-fasciculatus_F_contig13966:1091..11751622927887.2442575-CDS-E-fasciculatus_F_contig13966:1091..1175Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 1092..1175 -
1695995738.9779694-CDS-E-fasciculatus_F_contig13966:1091..11751695995738.9779694-CDS-E-fasciculatus_F_contig13966:1091..1175Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 1092..1175 -
1622927887.258477-CDS-E-fasciculatus_F_contig13966:1671..17911622927887.258477-CDS-E-fasciculatus_F_contig13966:1671..1791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 1672..1791 -
1695995738.9863448-CDS-E-fasciculatus_F_contig13966:1671..17911695995738.9863448-CDS-E-fasciculatus_F_contig13966:1671..1791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 1672..1791 -
1622927887.2798338-CDS-E-fasciculatus_F_contig13966:2520..26671622927887.2798338-CDS-E-fasciculatus_F_contig13966:2520..2667Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 2521..2667 -
1695995738.9950745-CDS-E-fasciculatus_F_contig13966:2520..26671695995738.9950745-CDS-E-fasciculatus_F_contig13966:2520..2667Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13966 2521..2667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13966.2905.1

>prot_E-fasciculatus_F_contig13966.2905.1 ID=prot_E-fasciculatus_F_contig13966.2905.1|Name=mRNA_E-fasciculatus_F_contig13966.2905.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=208bp
GEGRGAGRESGGEGVGDEESDGEDSEGLCLPGTEQTGRWTKAEHELFLKA
LKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGIPREDGEG
TDLMDIEVHMNTIDPSQATSAGSAPRTRGGAKRSHSGTSTSPSHHTPAAG
TGSATSGAAGSGSGSATSTAVVMGEREGLRARNLTRATLTPVMRKTTRTK
KLLLEAAA
back to top

mRNA from alignment at E-fasciculatus_F_contig13966:26..2667-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13966.2905.1 ID=mRNA_E-fasciculatus_F_contig13966.2905.1|Name=mRNA_E-fasciculatus_F_contig13966.2905.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2642bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13966:26..2667- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGGAGGGCAGAGGAGCGGGGAGAGAGAGCGGTGGCGAGGGTGTCGGCGA
CGAGGAGTCTGACGGGGAGGACAGCGAGGGGCTGTGCCTCCCGGGCACGG
AGCAGACGGGGCGTTGGACCAAGGCCGAGCACGAGCTGTTTCTGAAGGTG
AGCGGCGTGACCCTCGGGATGCTCATGTACTGGTGTAGGATAGCGGTGTG
GCGAAGGATCGAGATGCAGCTAGCTCTTGTGTAGATTATTTCTCAAAGTG
GAGGCTCGGGATGCTTCTGTATTGGATGGCAGCGCTGTGGCAACCAGTCG
AATGGTAACTAACTGCGGTGCTTATTCGGGCTGTATTTTTTCTACACTGC
CCCCCGCCCCATTTCACCGGCATCACGAGAGAGAGAGGACCCTGAGGCAG
AGCTGGCCCAGCGTCGCATGTGTTTCTGTTGTTGTGGGCTTGTGAAGCAT
CATGACTCATCTACCGCCCTCGTTTTCAGAGCTATTCGCTTATTCCATGG
AGCCAGCCCCCTCGGGACCAACCCCCCATGTGTCCTCGGTGTATCGTGCG
GAATTTATGTTGTATTGTGTCCCTTTAGGGTATTCCGTTCTCGAAAGAAA
GGACATGCTTGGGTTGGGGCAGCACACAGTGAAGGTATTTTTGCTCTCTT
CTGTTGCTAAATCTGTGGTTGCCTGCTACTTTCTGCCGGCCAAAGTTGTG
GAAAGATTCTCCTTGAGAAGAGAATTAAAGGTTTTGGTTGCGCCGCTAAT
GTTAACGCTGACAACGAAACAGGCCACGTCTTTTATCTCCTCCCCCCCTG
CTTGCAACACAACGTGTTTTGGAACTCCACCTCCCATTTAACAAGAAAAC
TCGTGTGTGTACCCCCCAAACGGCAGGCTCTCAAGAAGTACGGGAAGGAG
TGGAAGAGGGTGGCGTGCATGGTTCGAACGCGCACGGTCGTGCAGACCCG
CACGCACGCGCAGAAGTACTTCCAGAAGCTCACCAAGGCTGCCGCGGTAA
GAGAAAGAAGCACAAGAAGGGTCCTGTGCTGCTGCGAGCAGCTAGCTCGA
CATGCACCTCTTGTGTTTGTGTGTTTGCAACCACAGTGGTAGTGGTGGTT
GGAAGTAATTGTTTCCCCGCTGCCGCACGGGACAGAGAGAAGCCACGGAG
AGCGTTACATACGTACACGGGATTGTGGTTCTCGAGTTGCGTGGTTCTTC
GCATTGCGCGCTGTTTGCTTGCTCTTGCTCTCGCTTCAAGATTGTGTTGG
GACCATGCACGTCCGCCCTCCACTTCCCTCCACGTGGGACCATTGCGGTG
CTCGTTCTGTTTTTTGTCGTGGCGAGACACACAAGGAACTCATCAATATT
ACAGCAACGCGCCTGTGTCACGATTATGGCGTTGCGTCCCGCACTGACTG
GCTGTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCCGCCACGGCCCTCCGGCGTGTTTTTTCGTTGTGCAGGGAGGCGG
TATACCTCGGGAAGACGGGGAGGGGACCGACCTGATGGACATCGAGGTCC
ACATGAACACGATTGACCCGTCCCAGGTTAGTTGTGTGCACGGGCAGCGT
AGCTCGGAGGCACGACGCACACAGCAGCAGTTCGATTTCCCCCGGCATTA
GACGTTTGTTCCAGCTCCCGCGGCGTGTTTTTGTCCGCAGTGCTGTTGTA
CTACGCCGGCAAGTTGTGTTTACGGTAGATACCACACCCACACACGGCAG
TTGCACTAACGTACTTTTCGCATCCATCTAACCCCTGAAACAAACCACGC
TCGCTGCGAAGATTTGATTGACAGTAAGTAGCCTTCGCGAGGGTATTAAT
CTTGATCTTAATCTTGGTTTTAGTAGGGAGTACGGGGTCAGGGTTGGGGT
TAAGACCGGGATCTTGAACCACCCTCTGTCTCTACTTCATCGATCGGTGC
CACATCCCTCACGAAGACGGTCCAGATCTGAACCAATTTTCGTCCTTACT
GTTTTTATTCGATAAAACAGACTATCGATTTGTAACTCATTGTTTTATCA
CTATTTCAACAAAAATATCTCAAACCCAAGCAGGCTACCTCCGCCGGCTC
GGCGCCGCGCACGCGCGGGGGAGCCAAGCGGTCTCACTCCGGGACGTCGA
CGTCCCCTTCGCACCACACGCCCGCCGCCGGTACCGGCTCGGCGACGTCG
GGGGCGGCGGGTTCGGGTTCGGGTTCGGCTACGTCTACGGCGGTGGTGAT
GGGCGAGAGGGAGGGCCTGAGGGCGAGAAACCTAACCCGAGCTACCCTTA
CCCCAGTGATGAGGGTGAGATATTCATATGCATAGGATCTGTAGCTTGTG
GTTTTTGTTGTTTTTGTTCGTGCCGCGGGCGGGCAGGCGGGCGAGCGTCG
TTGACGGAACTTGTGGATGGAAAGGACGTGGTATATTTTTTTAATTTACT
TTTGTGATTTTTCGGATTATTTTACGTCGATCGAATGTCCTTGTAATGGG
CGGGGCTGGCCAATGGGTACGAACACAGCTGTGTGTGTGTGTTTGTCGAT
GACTCTTCTGAACTGAACGCAACAAATTCGCCGTACGCCCGCGAGCAGAA
GACGACGAGGACGAAGAAGTTGCTGTTGGAGGCGGCGGCGGG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13966:26..2667-

>mRNA_E-fasciculatus_F_contig13966.2905.1 ID=mRNA_E-fasciculatus_F_contig13966.2905.1|Name=mRNA_E-fasciculatus_F_contig13966.2905.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13966:26..2667- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGGAGGGCAGAGGAGCGGGGAGAGAGAGCGGTGGCGAGGGTGTCGGCGA
CGAGGAGTCTGACGGGGAGGACAGCGAGGGGCTGTGCCTCCCGGGCACGG
AGCAGACGGGGCGTTGGACCAAGGCCGAGCACGAGCTGTTTCTGAAGGGG
GAGGGCAGAGGAGCGGGGAGAGAGAGCGGTGGCGAGGGTGTCGGCGACGA
GGAGTCTGACGGGGAGGACAGCGAGGGGCTGTGCCTCCCGGGCACGGAGC
AGACGGGGCGTTGGACCAAGGCCGAGCACGAGCTGTTTCTGAAGGCTCTC
AAGAAGTACGGGAAGGAGTGGAAGAGGGTGGCGTGCATGGTTCGAACGCG
CACGGTCGTGCAGACCCGCACGCACGCGCAGAAGTACTTCCAGAAGCTCA
CCAAGGCTGCCGCGGCTCTCAAGAAGTACGGGAAGGAGTGGAAGAGGGTG
GCGTGCATGGTTCGAACGCGCACGGTCGTGCAGACCCGCACGCACGCGCA
GAAGTACTTCCAGAAGCTCACCAAGGCTGCCGCGGGAGGCGGTATACCTC
GGGAAGACGGGGAGGGGACCGACCTGATGGACATCGAGGTCCACATGAAC
ACGATTGACCCGTCCCAGGGAGGCGGTATACCTCGGGAAGACGGGGAGGG
GACCGACCTGATGGACATCGAGGTCCACATGAACACGATTGACCCGTCCC
AGGCTACCTCCGCCGGCTCGGCGCCGCGCACGCGCGGGGGAGCCAAGCGG
TCTCACTCCGGGACGTCGACGTCCCCTTCGCACCACACGCCCGCCGCCGG
TACCGGCTCGGCGACGTCGGGGGCGGCGGGTTCGGGTTCGGGTTCGGCTA
CGTCTACGGCGGTGGTGATGGGCGAGAGGGAGGGCCTGAGGGCGAGAAAC
CTAACCCGAGCTACCCTTACCCCAGTGATGAGGGCTACCTCCGCCGGCTC
GGCGCCGCGCACGCGCGGGGGAGCCAAGCGGTCTCACTCCGGGACGTCGA
CGTCCCCTTCGCACCACACGCCCGCCGCCGGTACCGGCTCGGCGACGTCG
GGGGCGGCGGGTTCGGGTTCGGGTTCGGCTACGTCTACGGCGGTGGTGAT
GGGCGAGAGGGAGGGCCTGAGGGCGAGAAACCTAACCCGAGCTACCCTTA
CCCCAGTGATGAGGAAGACGACGAGGACGAAGAAGTTGCTGTTGGAGGCG
GCGGCGAAGACGACGAGGACGAAGAAGTTGCTGTTGGAGGCGGCGGCG
back to top