mRNA_E-fasciculatus_F_contig13895.2856.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A6H5L0T1_9PHAE (PAP-associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T1_9PHAE) HSP 1 Score: 196 bits (499), Expect = 9.630e-62 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPP-QVAAAVPGAP 313
LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPP QVAAAVPGAP
Sbjct: 23 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPPTQVAAAVPGAP 127
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 196 bits (499), Expect = 3.380e-56 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPP-QVAAAVPGAP 313
LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPP QVAAAVPGAP
Sbjct: 1810 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPPPQVAAAVPGAP 1914
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A835ZHQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ3_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.180e-33 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLP 274
L++ +PALRPLA++LKQF+ E+GL SYTGGLSSYAL L+VARYLQEQ++ +D+GSLL GFLDF+GN FDPR TGISV R YFSR A P
Sbjct: 152 LIEEYPALRPLAIVLKQFLKERGLCESYTGGLSSYALVLLVARYLQEQSTHLDAGSLLRGFLDFFGNTFDPRTTGISVTRRCYFSRLAQTP 242
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: W7U5Q9_9STRA (Nucleotidyl transferase domain protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Q9_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.710e-29 Identity = 59/82 (71.95%), Postives = 68/82 (82.93%), Query Frame = 2
Query: 20 ALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSA 265
ALRPL L+LKQFM E+GL SY+GGLSSY L LMVARYLQEQ++ MD+G+LLLGFLDFY NHFDPR GIS + YFSRS+
Sbjct: 1174 ALRPLVLVLKQFMKERGLMESYSGGLSSYGLVLMVARYLQEQSNAMDTGALLLGFLDFYSNHFDPRSMGISTNQRCYFSRSS 1255
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A7R9W717_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W717_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.260e-28 Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 2
Query: 8 DGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQT-SQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR 259
+ +P +RPL L+LKQF++++GL +YTGGLSSY L LMV RYLQEQ S D G+LL+GFLDFYGN F+PR TGISV R +YFSR
Sbjct: 1 EEYPMVRPLVLVLKQFLLDRGLLTAYTGGLSSYCLFLMVTRYLQEQPLSWNDCGTLLMGFLDFYGNSFEPRSTGISVKRRQYFSR 85
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A7S1U3N8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3N8_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.290e-28 Identity = 61/88 (69.32%), Postives = 67/88 (76.14%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQM--DSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR 259
L+ P LRPL L+LKQF EKGLS SYTGG+SSYALTL+VARYLQE D GSLLLGFLDFYG+ FDPR TG+SV R YFSR
Sbjct: 230 LLAALPPLRPLTLILKQFCKEKGLSASYTGGISSYALTLLVARYLQETLGHSGGDLGSLLLGFLDFYGSKFDPRTTGVSVRRGVYFSR 317
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A1Z5KF72_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF72_FISSO) HSP 1 Score: 117 bits (294), Expect = 1.450e-28 Identity = 61/98 (62.24%), Postives = 74/98 (75.51%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPL--PAPPQV 289
++D P +RPL L+LKQF+ +GL +YTGGLS+Y L LMVARYLQEQ S D GSLL+GFLDFYGN+FDPR TGISV +YFSR + + PAP V
Sbjct: 1253 IMDELPVMRPLLLILKQFLSNRGLLTAYTGGLSAYGLFLMVARYLQEQESWGDCGSLLMGFLDFYGNNFDPRSTGISVKNRQYFSRLSAVMGPAPQSV 1350
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A1Z5KCZ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCZ8_FISSO) HSP 1 Score: 116 bits (291), Expect = 3.690e-28 Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR-SAPLPAPPQ 286
++D P +RPL L+LKQF+ +GL +YTGGLS+Y L LMVARYLQEQ S D GSLL+GFLDFYGN+FDPR GISV +YFSR SA + A PQ
Sbjct: 1254 IMDELPVIRPLLLILKQFLSNRGLLTAYTGGLSAYGLFLMVARYLQEQESWGDCGSLLMGFLDFYGNNFDPRSIGISVKNRQYFSRLSAAMGAAPQ 1349
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: B7G2A8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2A8_PHATC) HSP 1 Score: 113 bits (283), Expect = 4.430e-27 Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 2
Query: 2 LVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQ-TSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR 259
+++ P LRPL L+LKQF++++GL +YTGGLSSY L LMVARYLQEQ TS D GSLL+GFLDFYGN FDPR TGISV +YF R
Sbjct: 1263 ILEELPMLRPLVLILKQFLLDRGLLTAYTGGLSSYCLFLMVARYLQEQQTSWGDCGSLLMGFLDFYGNCFDPRTTGISVRHRQYFPR 1349
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Match: A0A448Z158_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z158_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.870e-26 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 2
Query: 5 VDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQT-SQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRS 262
++ P LRPL L+LKQ + +GL +YTGGLSSY L LM+ARYLQEQ S D GSLL+GFLDFYGNHFDPR GISVG +YF+R+
Sbjct: 1319 LEELPLLRPLMLVLKQLLSHRGLLTAYTGGLSSYCLFLMLARYLQEQPLSNSDYGSLLMGFLDFYGNHFDPRAMGISVGGRQYFARA 1405 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13895.2856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13895.2856.1 >prot_E-fasciculatus_F_contig13895.2856.1 ID=prot_E-fasciculatus_F_contig13895.2856.1|Name=mRNA_E-fasciculatus_F_contig13895.2856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=105bp PGGWFPGAAAAGALAQTVHDGERTVCQLHRRAVVVRAYAHGRKISSRADQback to top mRNA from alignment at E-fasciculatus_F_contig13895:1215..2395- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13895.2856.1 ID=mRNA_E-fasciculatus_F_contig13895.2856.1|Name=mRNA_E-fasciculatus_F_contig13895.2856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1181bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13895:1215..2395- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13895:1215..2395- >mRNA_E-fasciculatus_F_contig13895.2856.1 ID=mRNA_E-fasciculatus_F_contig13895.2856.1|Name=mRNA_E-fasciculatus_F_contig13895.2856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=630bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13895:1215..2395- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |