mRNA_E-fasciculatus_F_contig13788.2790.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13788.2790.1
Unique NamemRNA_E-fasciculatus_F_contig13788.2790.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: D7FZ88_ECTSI (Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ88_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 3.450e-52
Identity = 96/109 (88.07%), Postives = 97/109 (88.99%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE 327
            HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRG+           S SSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE
Sbjct:  106 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGAGG-------SSSGSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE 207          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A6H5L179_9PHAE (Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L179_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 4.150e-51
Identity = 94/109 (86.24%), Postives = 96/109 (88.07%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE 327
            HPAVVELLEFFEDERFVYLVLELCGGGD+YRRLRG+           S S GPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE
Sbjct:  103 HPAVVELLEFFEDERFVYLVLELCGGGDMYRRLRGAGSSGS------SGSRGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE 205          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A4P9W4A5_9FUNG (Kinase-like domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W4A5_9FUNG)

HSP 1 Score: 105 bits (263), Expect = 8.990e-26
Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKL 324
            HP+++EL  +FED+ +VYLV ELCG G+LYR ++             + +S PL E EA G +  L+ GL YLH +GI+HRDLKLSNLLL+ D   L+IADFGLAVKL
Sbjct:   62 HPSILELHTYFEDDAYVYLVTELCGNGELYRYVQ-------------NRASCPLSENEARGILVMLIRGLLYLHANGIIHRDLKLSNLLLT-DSFDLKIADFGLAVKL 155          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A6A0HAD2_HYAAZ (Serine/threonine-protein kinase PLK4 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0HAD2_HYAAZ)

HSP 1 Score: 104 bits (260), Expect = 6.880e-24
Identity = 56/108 (51.85%), Postives = 70/108 (64.81%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKL 324
            HP++++L  FFED RFVYLVLELC GG+L + L+G                 PL E +   Y+ Q++AG+ YLH   IMHRDL LSNLLL+ DG  LRIADFGLA +L
Sbjct:   47 HPSILKLYTFFEDARFVYLVLELCTGGELQKALKGK----------------PLPEEQCVRYVRQVVAGMLYLHSLSIMHRDLTLSNLLLAADGS-LRIADFGLATQL 137          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A8B7NRK3_HYAAZ (Serine/threonine-protein kinase PLK4 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NRK3_HYAAZ)

HSP 1 Score: 104 bits (260), Expect = 7.080e-24
Identity = 56/108 (51.85%), Postives = 70/108 (64.81%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKL 324
            HP++++L  FFED RFVYLVLELC GG+L + L+G                 PL E +   Y+ Q++AG+ YLH   IMHRDL LSNLLL+ DG  LRIADFGLA +L
Sbjct:   71 HPSILKLYTFFEDARFVYLVLELCTGGELQKALKGK----------------PLPEEQCVRYVRQVVAGMLYLHSLSIMHRDLTLSNLLLAADGS-LRIADFGLATQL 161          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A1R2BV98_9CILI (Aurora kinase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BV98_9CILI)

HSP 1 Score: 103 bits (258), Expect = 8.780e-24
Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE 327
            HP +V+L   FED  F+YLVLELC GG+LY +++                 G L E +A      ++ GL YLH +GI+HRDLKL NLLLSED   ++IADFGLAVKLE
Sbjct:   71 HPCIVKLFNTFEDNDFIYLVLELCAGGELYTQIK---------------EVGKLQEEDAKIMCSHIVEGLIYLHSNGILHRDLKLGNLLLSEDRTLVKIADFGLAVKLE 164          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A2P2IFH1_9CRUS (Serine/threonine-protein kinase PLK4-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IFH1_9CRUS)

HSP 1 Score: 99.8 bits (247), Expect = 9.610e-24
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKL 324
            HP++++L  FFED ++VYL+LELC GG+L + LR                  PL E +   Y+ Q+++G+ YLH   IMHRDL LSNLLLS DG  LRIADFGLA +L
Sbjct:   17 HPSILKLYTFFEDVQYVYLILELCTGGELKKALRAK----------------PLHEVQCVCYLQQVVSGMLYLHNQSIMHRDLTLSNLLLSSDGT-LRIADFGLATQL 107          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: UPI0018A71196 (serine/threonine-protein kinase PLK4-like n=1 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A71196)

HSP 1 Score: 98.6 bits (244), Expect = 1.380e-23
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKL 324
            HPA+++L  FFED+ FVYLVLELC  G+L + ++              S    L+E EA  Y+ Q++AG+ YLH   IMHRDL LSNLLL  +GR ++IADFGLA +L
Sbjct:   71 HPAILKLYAFFEDQSFVYLVLELCSRGELQKHIK--------------SLRRVLNEDEAREYLSQVVAGMLYLHSQSIMHRDLTLSNLLLDNNGR-VKIADFGLATQL 163          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A1R2CUB6_9CILI (Aurora kinase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CUB6_9CILI)

HSP 1 Score: 103 bits (256), Expect = 1.670e-23
Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLE 327
            HP +V+L   FEDE  +YLVLELC GG+LY +++                 G L E EA      ++ GL YLH +GI+HRDLKL NLLLSED   ++IADFGLAVKL+
Sbjct:   71 HPCIVKLYNTFEDEDLIYLVLELCAGGELYTQIK---------------EEGRLQEEEAKIMCSHIVEGLIYLHSNGILHRDLKLGNLLLSEDRTLVKIADFGLAVKLK 164          
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Match: A0A507EEX0_9FUNG (Protein kinase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EEX0_9FUNG)

HSP 1 Score: 103 bits (256), Expect = 2.430e-23
Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 1
Query:    1 HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSXXXXXXXXXDCSSSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKL 324
            HP+++EL  +FED+ +VYLV+ELC  G+LYR +             C     PL E EA G M Q++ GL YLH +GI+HRDLKLSNLLL+ D   ++IADFGLAVKL
Sbjct:  120 HPSILELYNYFEDQSYVYLVMELCQNGELYRYIH---------QRKC-----PLTEPEARGVMAQIVRGLLYLHANGIIHRDLKLSNLLLT-DNFDVKIADFGLAVKL 212          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13788.2790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ88_ECTSI3.450e-5288.07Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5L179_9PHAE4.150e-5186.24Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A4P9W4A5_9FUNG8.990e-2652.78Kinase-like domain-containing protein (Fragment) n... [more]
A0A6A0HAD2_HYAAZ6.880e-2451.85Serine/threonine-protein kinase PLK4 n=1 Tax=Hyale... [more]
A0A8B7NRK3_HYAAZ7.080e-2451.85Serine/threonine-protein kinase PLK4 n=1 Tax=Hyale... [more]
A0A1R2BV98_9CILI8.780e-2449.54Aurora kinase n=1 Tax=Stentor coeruleus TaxID=5963... [more]
A0A2P2IFH1_9CRUS9.610e-2449.07Serine/threonine-protein kinase PLK4-like (Fragmen... [more]
UPI0018A711961.380e-2349.07serine/threonine-protein kinase PLK4-like n=1 Tax=... [more]
A0A1R2CUB6_9CILI1.670e-2349.54Aurora kinase n=1 Tax=Stentor coeruleus TaxID=5963... [more]
A0A507EEX0_9FUNG2.430e-2351.85Protein kinase domain-containing protein n=2 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13788contigE-fasciculatus_F_contig13788:5..334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.9
Seed ortholog evalue2e-44
Seed eggNOG ortholog2880.D7FZ88
KEGG koko:K06660,ko:K08863
KEGG Pathwayko04068,ko04111,ko04113,map04068,map04111,map04113
EggNOG free text desc.regulation of centriole replication
EggNOG OGsKOG0575@1,KOG0575@2759
EC2.7.11.21
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-06_008930.1
Exons1
Model size330
Cds size330
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927870.536399-CDS-E-fasciculatus_F_contig13788:4..3341622927870.536399-CDS-E-fasciculatus_F_contig13788:4..334Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13788 5..334 +
1695995731.8310106-CDS-E-fasciculatus_F_contig13788:4..3341695995731.8310106-CDS-E-fasciculatus_F_contig13788:4..334Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13788 5..334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13788.2790.1prot_E-fasciculatus_F_contig13788.2790.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13788 5..334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13788.2790.1

>prot_E-fasciculatus_F_contig13788.2790.1 ID=prot_E-fasciculatus_F_contig13788.2790.1|Name=mRNA_E-fasciculatus_F_contig13788.2790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp
HPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGSSSSSSSSSKDCSSS
SGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIA
DFGLAVKLE*
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mRNA from alignment at E-fasciculatus_F_contig13788:5..334+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13788.2790.1 ID=mRNA_E-fasciculatus_F_contig13788.2790.1|Name=mRNA_E-fasciculatus_F_contig13788.2790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=330bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13788:5..334+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCCGGCAGTCGTAGAGCTGCTGGAGTTTTTCGAGGACGAGCGGTTCGT CTACCTGGTGCTGGAGCTGTGCGGGGGCGGCGACTTGTACCGCAGGCTGC GGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGACTGCAGCAGCAGT AGCGGGCCGCTCGACGAGAGAGAGGCGGCCGGCTACATGGGCCAGCTGCT GGCGGGGTTGCAGTACCTCCATGAGAGCGGGATCATGCACCGGGACCTGA AGCTGTCGAACTTGCTGCTTTCGGAGGACGGCAGGCGGCTCAGGATTGCC GACTTTGGTCTGGCCGTCAAACTCGAGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13788:5..334+

>mRNA_E-fasciculatus_F_contig13788.2790.1 ID=mRNA_E-fasciculatus_F_contig13788.2790.1|Name=mRNA_E-fasciculatus_F_contig13788.2790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13788:5..334+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCCGGCAGTCGTAGAGCTGCTGGAGTTTTTCGAGGACGAGCGGTTCGT
CTACCTGGTGCTGGAGCTGTGCGGGGGCGGCGACTTGTACCGCAGGCTGC
GGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGACTGCAGCAGCAGT
AGCGGGCCGCTCGACGAGAGAGAGGCGGCCGGCTACATGGGCCAGCTGCT
GGCGGGGTTGCAGTACCTCCATGAGAGCGGGATCATGCACCGGGACCTGA
AGCTGTCGAACTTGCTGCTTTCGGAGGACGGCAGGCGGCTCAGGATTGCC
GACTTTGGTCTGGCCGTCAAACTCGAGTGACACCCGGCAGTCGTAGAGCT
GCTGGAGTTTTTCGAGGACGAGCGGTTCGTCTACCTGGTGCTGGAGCTGT
GCGGGGGCGGCGACTTGTACCGCAGGCTGCGGGGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAAGGACTGCAGCAGCAGTAGCGGGCCGCTCGACGAGAG
AGAGGCGGCCGGCTACATGGGCCAGCTGCTGGCGGGGTTGCAGTACCTCC
ATGAGAGCGGGATCATGCACCGGGACCTGAAGCTGTCGAACTTGCTGCTT
TCGGAGGACGGCAGGCGGCTCAGGATTGCCGACTTTGGTCTGGCCGTCAA
ACTCGAGTGA
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