mRNA_E-fasciculatus_F_contig1373.2757.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: D7FKL7_ECTSI (HU-CCDC81_euk_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL7_ECTSI) HSP 1 Score: 508 bits (1309), Expect = 7.540e-175 Identity = 293/382 (76.70%), Postives = 296/382 (77.49%), Query Frame = 1
Query: 250 MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFDCAVLCRNGSTTTRTDTSSSCGGEHVGREEWDGLSTGRSRSSSGLTPRWPAXXXXXXXXXXXXXXXXXXXXXXXXXETPPGTPGTGVSELDGWNQPPTDXXXXXXXXXCPGGGVLGKEFDEEVERQRAQEVAAERGRKRGSGKRCKTREKASGSSTCLVWEYAFRNHVTELEGLAEDDMNLANRTRLLQLAEDRRKAEERENKQREMHDLLTFVQGQIHAEIEDRRVLEVESKRNGDKPLTFSARRDRASTPNEKYRGTAWRAPDWGPRRARASNLTRDELLGCLQ 1395
MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSV FSFGTLE KERKFQFTFDCA LCRNGSTTTRTDTSSSCGGE REEWDGLSTGRSRSSSGL+PR PA XXXXXXXX E PPGTP TG+SE DGWNQPPT XXXXXX CPG GVLGKEFDEEVERQRAQEVAAERGRKRGSGKRCKTREK VWE AFR+HVT LEGLAEDDM IEDRR LEVESKRNGDKPLTFSARRDRAST NEKYRGTAWRAPDWGPRRARASNLTRDELLGCLQ
Sbjct: 1 MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCRNGSTTTRTDTSSSCGGERGEREEWDGLSTGRSRSSSGLSPRRPAGSGLGARNCSDDGHXXXXXXXXRNAEPPPGTPCTGISERDGWNQPPTXXXXXXXGR-CPGEGVLGKEFDEEVERQRAQEVAAERGRKRGSGKRCKTREK--------VWESAFRDHVTALEGLAEDDM------------------------------------------IEDRRALEVESKRNGDKPLTFSARRDRASTVNEKYRGTAWRAPDWGPRRARASNLTRDELLGCLQ 331
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: F0YCP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCP0_AURAN) HSP 1 Score: 105 bits (261), Expect = 2.720e-20 Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = 1
Query: 127 LRKAWDILNKWALEILVDRGTVDVPNFMRVGWQ---RFRTLDGEMRL-----------RPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFDCAVL 552
LR+AWD LN W L+ ++ R VPNF + WQ F D + RL RPVF+ E FCR+H LP +R L + ++YS LA+RY++ +TKDMV+ ALR+V R +G+ ++SG + V S G+L + K +F FD A L
Sbjct: 31 LREAWDALNAWILDRVIQRRGAAVPNFGKFTWQVLGGFTPADLDPRLAGKKAASKIPLRPVFMFAENFCRSHGLPWRRQNEADLVK--CGDLDYSNLALRYSSHLTKDMVFAALRDVTRRVGEKIASGFALRVKMSVGSLVCEHGKCRFEFDAASL 184
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: A0A8J2SU03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU03_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 4.090e-16 Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 127 LRKAWDILNKWALEILVDRGTVDVPNFMRVGWQ---RFRTLDGEMR------LRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFDCAVLCR 558
LR++W+ L W L+ + +P F R WQ ++ D + R LRPVF +E FC+AH LP + I L A +NYS LA+R+T+ +TKDMV+ ALR++ R IGD ++SG +++ F G L + K +F FD + L R
Sbjct: 42 LRESWEALRVWLRAKLLAKRGASIPGFGRFTWQVLGDYKPSDLQDRPDELIPLRPVFQFSEDFCKAHLLPWRPIAEDKLVECAD--LNYSILALRHTSRLTKDMVWSALRDLQRKIGDRIASGYSLTLDFGVGQLVSDRGKPRFLFDASKLRR 192
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: A0A1W0A7S2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7S2_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.970e-16 Identity = 44/148 (29.73%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 97 SCQFGRSRTLLRKAWDILNKWALEILVDRGTVDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFD 540
SC + + +L + W LN W D V V F ++ W+ ++RP+F+LN+ + + + L +K+ + P+ A E +N++KLAI+Y+ +TKD+V+ +R++ IG+ S+G Q+S+ + G + AK + FD
Sbjct: 19 SCAADKKKEILEEVWMALNAWIEARYNDGKGVHVAPFCKISWETITVGRNTRKIRPIFLLNDTYGKTYGLHYKKRVTVPIVA-AIEDINFTKLAIKYSKNLTKDIVFSGVRDLLHKIGEIASTGAQMSIELTIGKIVAKNKAIHMIFD 165
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: G4YXB9_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YXB9_PHYSP) HSP 1 Score: 89.4 bits (220), Expect = 2.670e-15 Identity = 48/148 (32.43%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 100 CQFGRSRTLLRKAWDILNKWALEILVDRGT-VDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFD 540
C R R L W N W +E ++G V + F + W+ F + +LRP+F L++ F + + L +R P + E +N++K+AI+++ +TKD+V+ A+R++ + IG S+G +S+AF+FG L AK R FD
Sbjct: 22 CAADRKRETLEDVWRAFNDW-IESRFNQGKGVHIATFATITWETFTNSRNQPKLRPIFFLSDTFIKTYGLSQRRPPLPSANLASLEDINFTKIAIKFSHNLTKDLVFCAIRDMVQKIGMVASTGVPMSIAFNFGRLIAKNRCVSVLFD 168
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: H3GLA0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLA0_PHYRM) HSP 1 Score: 89.0 bits (219), Expect = 3.370e-15 Identity = 47/147 (31.97%), Postives = 75/147 (51.02%), Query Frame = 1
Query: 100 CQFGRSRTLLRKAWDILNKWALEILVDRGTVDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFD 540
C R R L W N W V + F + W+ F + +LRP F L++ F + + + KR P + E +N++K+AIR++ +TKD+V+ A+R++ + IG S+G +S+AF+FG L AK R FD
Sbjct: 22 CASERKRETLEDVWRAFNDWIESRFSQGKGVHIATFATITWETFTNARNQPKLRPTFFLSDTFIKTYGVSQKRPPLPNANLASLEDINFTKIAIRFSHNLTKDLVFCAIRDMVQQIGMVASTGVPMSIAFNFGRLIAKNRCVSVLFD 168
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: A0A067BGL6_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BGL6_SAPPC) HSP 1 Score: 85.5 bits (210), Expect = 7.840e-15 Identity = 43/168 (25.60%), Postives = 84/168 (50.00%), Query Frame = 1
Query: 97 SCQFGRSRTLLRKAWDILNKWALEILVDRGTVDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFDCAVLCRNGSTTTRTDTSSSC 600
SC + + L + W LN W + + F ++ W+ ++RP+F+LN+ F + + L +K+ + P+ A E +N++KLAI+++ +TKD+V+ +R++ IG+ S+G Q+++ + G + AK R FD ++ +S C
Sbjct: 19 SCAADKKKETLEEVWIALNAWVEARYHEGKGAHIAPFGKISWETLTIGRNTRKVRPIFMLNDTFGKTYGLQYKKRVTVPIVA-AIEDINFTKLAIKFSKNLTKDVVFCGVRDLLHKIGEVASTGAQMTIEMTIGKIVAKNRAIHLLFDPTQFPKSLENIATASVASGC 185
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: A0A8K1FKM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKM3_PYTOL) HSP 1 Score: 87.8 bits (216), Expect = 7.930e-15 Identity = 45/148 (30.41%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 100 CQFGRSRTLLRKAWDILNKWA-LEILVDRGTVDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFD 540
C + R L W LN W V +G V + F + W+ + +LRP+F+L++ F +++ L K+ L PP + E +N++K+AI+++ +TKD+V+ +R++ + IG+ +G +S+ F+ G L AK R FD
Sbjct: 22 CAADKKRETLEDIWRALNDWIDSRFEVGKG-VHIATFATISWETCTNSRNQPKLRPLFLLSDTFIKSYGLQQKKPLTPPCLA-SLEDINFTKIAIKFSKNLTKDLVFSGIRDLLQKIGEVAGAGTPMSITFNIGRLIAKNRCISLVFD 167
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: W2I8D9_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2I8D9_PHYPR) HSP 1 Score: 87.4 bits (215), Expect = 1.100e-14 Identity = 47/144 (32.64%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 112 RSRTLLRKAWDILNKWALEILVDRGT-VDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFD 540
++R L W N W +E ++G V + F + W+ F + +LRP+F L++ F + + L KR P + E +N++K+AI+++ +TKD+V+ A+R++ + IG S+G +S+ FSFG L AK R FD
Sbjct: 26 KNRETLESVWRAFNDW-IESRFNQGKGVHIATFATITWETFTNSRNQPKLRPIFFLSDTFTKTYVLSQKRPPLPSANLASLEDINFTKIAIKFSRNLTKDLVFCAIRDLVQKIGMVASTGVPMSIEFSFGRLIAKNRCISMLFD 168
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Match: A0A5D6XS35_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS35_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.120e-14 Identity = 47/150 (31.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 112 RSRTLLRKAWDILNKW-ALEILVDRGTVDVPNFMRVGWQRFRTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVAFSFGTLEAKERKFQFTFDCAVLCR 558
+ R L W N W + V +G V + F + W+ + +LRPVF+L++ F R + L H++ P A E +N++K+AI+++ +TKD+V+ +R++ + +G+ +G Q+S+AFS G L AK R FD + R
Sbjct: 154 KKRETLEDIWRAFNDWISSRFDVGKG-VHIATFASISWETCTNSRNQPKLRPVFVLSDTFARTYGLQHRKPPSPGGLG-ALEEINFTKIAIKFSRTLTKDLVFSGVRDLLQRLGELAGAGAQLSIAFSVGRLVAKNRVVSMVFDPVQIPR 301 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1373.2757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1373.2757.1 >prot_E-fasciculatus_F_contig1373.2757.1 ID=prot_E-fasciculatus_F_contig1373.2757.1|Name=mRNA_E-fasciculatus_F_contig1373.2757.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=493bp MVSSSGVATIDTILDNARCDHIRVQPAATPAGSCQFGRSRTLLRKAWDILback to top mRNA from alignment at E-fasciculatus_F_contig1373:270..9524- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1373.2757.1 ID=mRNA_E-fasciculatus_F_contig1373.2757.1|Name=mRNA_E-fasciculatus_F_contig1373.2757.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9255bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1373:270..9524- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1373:270..9524- >mRNA_E-fasciculatus_F_contig1373.2757.1 ID=mRNA_E-fasciculatus_F_contig1373.2757.1|Name=mRNA_E-fasciculatus_F_contig1373.2757.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2958bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1373:270..9524- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |