mRNA_E-fasciculatus_F_contig13726.2755.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13726.2755.1
Unique NamemRNA_E-fasciculatus_F_contig13726.2755.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: D7FT60_ECTSI (Nitroreductase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT60_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 1.320e-133
Identity = 195/202 (96.53%), Postives = 199/202 (98.51%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERREIKTLR 606
            VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAK KLS+AMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLA+EGWPEGFIKKVPLYLSVFSTGHNRLLRLPL AAKKLSFAVVRRLGKGMPTVSGAE WAFK+TMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSD+RREIKTLR
Sbjct:   94 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLSRAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAKEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLR 295          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A6H5L6J9_9PHAE (Nitroreductase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J9_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 3.630e-81
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 1
Query:  226 MLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERREIKTLR 606
            MLAEEGWP+GFI KVPLYLSVFSTGHNRLLRLPL AAKKLSFAVVRRLGKGMPTVSGAE WAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSD+RREIKTLR
Sbjct:    1 MLAEEGWPKGFINKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLR 127          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A835Z5B9_9STRA (Nitroreductase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B9_9STRA)

HSP 1 Score: 237 bits (605), Expect = 7.210e-76
Identity = 115/202 (56.93%), Postives = 152/202 (75.25%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERREIKTLR 606
            VP +VL+ +L + LRAPS FN+QPY+ +V+ S ++KQ LSKAML  N++RVL AGATVVFA+D N MK++ K+  M  E G    F++K+PLY++VFS+GHNR+LR  +T  K++ F++ RRLG  +P V+ AE WAFKNTMLAV+  +LAA ++GLATCPMEGFD R+LRK   IP RYSVP+VVSIGYP    R +K  R
Sbjct:   33 VPAEVLQDLLQVTLRAPSAFNVQPYKALVINSPQSKQLLSKAMLSTNKKRVLDAGATVVFAADKNCMKDIGKVVDMFKEGGSNAAFVRKIPLYVAVFSSGHNRVLRPIMTFIKQVVFSIARRLGLELPPVNSAEAWAFKNTMLAVEAFMLAAAANGLATCPMEGFDPRQLRKQFHIPRRYSVPVVVSIGYPKPSDRPLKQSR 234          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A6V1NJ53_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJ53_HETAK)

HSP 1 Score: 186 bits (472), Expect = 1.440e-54
Identity = 93/194 (47.94%), Postives = 133/194 (68.56%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGP-NRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSD 579
            +PD+ +  ++ L  RAPSGFN+QPY  ++V S+E K+ L+ AMLG  N+ RVL A  T VFASDL ++++VR++  +L  +G P+  +      L++FS GH  LLRLP    +KL+F  V  +    P VS  ETWA KNTMLAVQ  +LA+ ++GL T PMEG+D RR+R+AL++P R++VP+VV+ GYP D
Sbjct:   94 IPDETMDHIIDLTQRAPSGFNVQPYVIVLVKSEETKRALADAMLGASNKRRVLEAPVTAVFASDLENLRHVRRVEGLLRAQGLPKAAVDLARPGLTIFSGGHRALLRLPSLIVRKLAFRPVSLI-TASPKVSTPETWAVKNTMLAVQNYMLASVAYGLNTAPMEGYDARRVRRALKLPRRFTVPLVVATGYPGD 286          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A4D9D236_9STRA (Nitroreductase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D236_9STRA)

HSP 1 Score: 164 bits (415), Expect = 8.800e-47
Identity = 89/195 (45.64%), Postives = 126/195 (64.62%), Query Frame = 1
Query:   16 LKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLS-KAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEG-WPEGFIKKVPLYLSVFSTGHN-RLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERRE 591
            L ++L L  RAPS FNIQP++ +V+     + K++ +AMLG N  RV  A  TVVFA+D+ S + + ++  +L + G +PEGF+ K+P + ++FSTG+   LLR  L   K+++  VV    K +P +   ETWA KNTMLA    +LAA+SH L TCPMEGFD RRLR  L +P RY +P+VVS+GY +    E
Sbjct:   49 LNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKIAHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLNKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWF-KAVPRLERPETWAVKNTMLAAMTFMLAASSHSLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEE 242          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A6S8C805_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8C805_9STRA)

HSP 1 Score: 163 bits (412), Expect = 7.940e-46
Identity = 83/196 (42.35%), Postives = 124/196 (63.27%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERR 588
            VP + L+K+L+L  RAPS FN+QPY+ ++V  +  K++++  M   N ++VL A  T+VFASDL   + + K+  +  E G PE  +K      +VF    N   ++     KK  F+ + ++ + MPT++ +E WAFKNTM A Q  +L   ++GLAT PMEGFD RR+R AL IP RY +P+VVS+GYPS+E +
Sbjct:   82 VPLETLEKILSLTQRAPSSFNLQPYKAVIVRDEIVKKRVAYCMTDNNIKKVLNASLTLVFASDLKPGQEIDKIMALEREHGLPEQVVKARKFGATVFVGSSNEAEKV----VKKTLFSTISQVTQ-MPTINSSEGWAFKNTMTAAQTFILGCHAYGLATAPMEGFDARRIRDALYIPDRYEIPVVVSVGYPSEEEK 272          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A484DVA5_BRELC (Nitroreductase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVA5_BRELC)

HSP 1 Score: 152 bits (384), Expect = 2.560e-42
Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERREIK 597
            V D+ LK++L L LRAP+ FN+QPY CI+V  ++ ++KL++AM+G N  +V+ A    VFA+DL   K V +L  +  + G P  F+  +P  + +FS G   +  +     +K+    V  L      VS  E W+FK T  A    L AA  HGLATCPMEGFD+ R+R AL IP RYSVP+V+++GY     +  K
Sbjct:   48 VSDETLKEILKLTLRAPTSFNVQPYACILVRQEKDRKKLAEAMMGGNARKVIEAPVIAVFAADLEPTKRVPRLQKLAYDSGAPADFVSNMPHVVRLFS-GEGMISSM----LRKIISTAVSPLQPAPSDVS-TEAWSFKQTSFAAATFLYAAQVHGLATCPMEGFDIIRVRNALDIPDRYSVPVVIALGYADPSAKPKK 240          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A812HTX2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812HTX2_9DINO)

HSP 1 Score: 149 bits (376), Expect = 7.260e-42
Identity = 81/190 (42.63%), Postives = 111/190 (58.42%), Query Frame = 1
Query:   43 RAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKG---MPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGY-----PSDERR 588
            R+PSGFN+QPY  ++V S+EAK  ++ A LGPN  RV  A  T VFA+DL S++ V  +  M    G  EG++  +P+  + F++G       PL     L  + + R       MPT      WA+K T +A   +LLAAT+HGLATCPMEGFD  R+ +AL IP RY VP+++S+G      PS  RR
Sbjct:    1 RSPSGFNLQPYTIVMVQSEEAKAAVADACLGPNAWRVQDAAVTAVFAADLESLRRVDAVVQMERSSGAHEGYLASLPMNAAAFASG-------PLPRIASLVRSTLIRAASALTPMPTPQSPSAWAYKQTAMAATTMLLAATAHGLATCPMEGFDGDRIARALDIPSRYDVPLIISMGQAHAEDPSQARR 183          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: W2YM79_PHYPR (Nitroreductase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=W2YM79_PHYPR)

HSP 1 Score: 150 bits (380), Expect = 9.140e-42
Identity = 80/201 (39.80%), Postives = 116/201 (57.71%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAET--WAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERREIK 597
            VP++ LK++L L  RAP+GFN+QPY C++V   + ++KL++AM+  N  +V  A    VFA+DL   K V +L  ++ + G P  F+  +P  + +FS G           A  L  A+   +   MP  S   T  WAFK T  A    L AA +HGLATCPMEGFD  R+R AL IP RY VP+V+++G+ + + +  K
Sbjct:   44 VPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGAPADFVANMPHVVRLFS-GEG-------VVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHANPDAKPEK 236          
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Match: A0A7S2US60_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US60_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.450e-41
Identity = 79/192 (41.15%), Postives = 119/192 (61.98%), Query Frame = 1
Query:    1 VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRE-RVLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTGH-NRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGY 570
            +  +V++++  + +RAP+GFN QPY+ I V+  E ++ +   MLG + E RV++A  T VF +D  ++++  K+  +   EG+PE F++     L+VFS GH NR LR      K ++F ++  +G  +P V  A  W  KNTM+     LLA  SHGL T PMEGFD R+LRK L+IP RY++P+VV  GY
Sbjct:  189 IAPEVVRELAEVTIRAPTGFNAQPYKVIFVSDPEVRRAVGSCMLGGSNEARVISAPLTAVFLADKENLRDQDKVLNVWRAEGFPEPFLRLARTGLNVFSGGHGNRFLRWLAFTIKSIAFRLLSIVGMSLPQVFTAGVWCTKNTMIPASFYLLACQSHGLGTAPMEGFDARQLRKVLKIPKRYNIPLVVPTGY 380          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13726.2755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT60_ECTSI1.320e-13396.53Nitroreductase-like protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5L6J9_9PHAE3.630e-8196.06Nitroreductase domain-containing protein n=1 Tax=E... [more]
A0A835Z5B9_9STRA7.210e-7656.93Nitroreductase-like protein n=1 Tax=Tribonema minu... [more]
A0A6V1NJ53_HETAK1.440e-5447.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D236_9STRA8.800e-4745.64Nitroreductase domain-containing protein n=3 Tax=M... [more]
A0A6S8C805_9STRA7.940e-4642.35Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A484DVA5_BRELC2.560e-4241.21Nitroreductase domain-containing protein n=1 Tax=B... [more]
A0A812HTX2_9DINO7.260e-4242.63Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
W2YM79_PHYPR9.140e-4239.80Nitroreductase domain-containing protein n=5 Tax=P... [more]
A0A7S2US60_9STRA1.450e-4141.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13726contigE-fasciculatus_F_contig13726:263..3553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score385.6
Seed ortholog evalue1.5e-104
Seed eggNOG ortholog2880.D7FT60
EggNOG free text desc.Nitroreductase family
EggNOG OGs2RZ0D@2759,COG0778@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionnitroreductase-like protein
Ec32 orthologEc-19_003470.1
Exons5
Model size609
Cds size609
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13726.2755.1prot_E-fasciculatus_F_contig13726.2755.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13726 263..3553 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927866.6348574-CDS-E-fasciculatus_F_contig13726:262..4331622927866.6348574-CDS-E-fasciculatus_F_contig13726:262..433Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 263..433 -
1695995730.1316376-CDS-E-fasciculatus_F_contig13726:262..4331695995730.1316376-CDS-E-fasciculatus_F_contig13726:262..433Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 263..433 -
1622927866.651724-CDS-E-fasciculatus_F_contig13726:867..10841622927866.651724-CDS-E-fasciculatus_F_contig13726:867..1084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 868..1084 -
1695995730.144925-CDS-E-fasciculatus_F_contig13726:867..10841695995730.144925-CDS-E-fasciculatus_F_contig13726:867..1084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 868..1084 -
1622927866.6715388-CDS-E-fasciculatus_F_contig13726:1721..17931622927866.6715388-CDS-E-fasciculatus_F_contig13726:1721..1793Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 1722..1793 -
1695995730.153427-CDS-E-fasciculatus_F_contig13726:1721..17931695995730.153427-CDS-E-fasciculatus_F_contig13726:1721..1793Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 1722..1793 -
1622927866.6887312-CDS-E-fasciculatus_F_contig13726:2926..30511622927866.6887312-CDS-E-fasciculatus_F_contig13726:2926..3051Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 2927..3051 -
1695995730.1626-CDS-E-fasciculatus_F_contig13726:2926..30511695995730.1626-CDS-E-fasciculatus_F_contig13726:2926..3051Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 2927..3051 -
1622927866.7104385-CDS-E-fasciculatus_F_contig13726:3529..35531622927866.7104385-CDS-E-fasciculatus_F_contig13726:3529..3553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 3530..3553 -
1695995730.171033-CDS-E-fasciculatus_F_contig13726:3529..35531695995730.171033-CDS-E-fasciculatus_F_contig13726:3529..3553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13726 3530..3553 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13726.2755.1

>prot_E-fasciculatus_F_contig13726.2755.1 ID=prot_E-fasciculatus_F_contig13726.2755.1|Name=mRNA_E-fasciculatus_F_contig13726.2755.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=203bp
VPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKQKLSKAMLGPNRER
VLAAGATVVFASDLNSMKNVRKLTTMLAEEGWPEGFIKKVPLYLSVFSTG
HNRLLRLPLTAAKKLSFAVVRRLGKGMPTVSGAETWAFKNTMLAVQELLL
AATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDERREIKT
LR*
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mRNA from alignment at E-fasciculatus_F_contig13726:263..3553-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13726.2755.1 ID=mRNA_E-fasciculatus_F_contig13726.2755.1|Name=mRNA_E-fasciculatus_F_contig13726.2755.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3291bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13726:263..3553- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCCGGACGACGTCTTGAAGAAGGTGATGCGCCTTGATTGATCCTTCCG CCCGCCCTCCTAAGCCCCCAGAGCCGGGGTATTCTCGAACAAAGACTGTC AATAGGAATCCATATACTCGCAGGCGTTCATTGTTTACGACAGTGCCATA CGCAGCTTTGCGCACAAACAACGCCTGTTTGCGCTCGAGAGGGGTATCGC TGTGGGGTGGTTGGGAACTCTTGTGCTCGTTTAGTGCGTCTTCTTGTGGT TGGCCTGCTTGACATGATTCGGTGTCGCTGCACTGTTGTGGCTACATTCA GAATGGAAAAGACAGGAGGGGCCTTCTCTAGGCCTGCCGTGAGTCGCAAG TTCTCCTCGATTTCTTTCATCTTGTCGATCGTGCTACTCATTCTGCTTAT TCGTCTGTAGGTGATGTAGTTCCCTTTTTTCTTGATAGAAGCGTCCCTCT CGCCTTCATTTTTTCACGCCCTGTCTCCTCGTTTCTTTTCTTTTCTCGGA AGGTGTTGGCTCTAGTGTTGCGAGCCCCCTCCGGGTTCAACATCCAGCCG TACGAATGCATCGTGGTGACGTCCGACGAGGCCAAGCAAAAGCTCAGCAA GGCCATGTTAGGCCCGAACCGAGAGAGGTGAGGCGCCATTACATCGCATC ACCCTTTCCTGATGCCGAACAAACACTTCAGCCACGCTGGGCGCGAACTG CAATGGGTATATTTGAATCAAAGACCCCTTTCGACCGCCATGAGAGGCAC CGATACATCACCCTTCACCGATGCCGAAGAAACAAACAATTCAGCCACTT TAGGCACGAAATGAGAGAGGTATATTGAATCAAAGACCCCTTTCGACCGC CCTACGACAAGTTCAGAGGCACCGATATAGCATCCTTCCCTGATGCCGAA CGGCAAGAAATTCAGTAATGTTTTAGTTCAGCTCGAGAGAATTGAGCTAC TGTTATTTACTGCACACGCGCGAGCAGCAAATTCTGAACACGCGAGCCCC TCTCACGCTTGTCTTGTTTCCCACGCTTTTCTTTTTTCATCACTGCCTTT CTTTATTTTTTTTCGTCGCTCGCAGTCTCAGTTGTACCCGCACCGTACGG TCTTGCCTCTCGCGGTTGTGCCACACGGTGAAACCAAGCAGGTTTAGATG AACGCCCACGTTGTACAGATGGATACACGAGCAAGGTTTTCACCTACTTC CGCTGCACTTGGCCGCCGCCTATGCACCCCGCGGTTTTCTCCACTTTTCC TCTCGAAGCCCCGCGTGGTTTACTTCGGCAGTATCGCCCGTCGTTCGATG TATACCGCGAGGGCACCATTTCGGCTCTGCACTCTTGTTTTCACTTTTGT TTTGCGCCACCGGCCGTTGTTGGGTGAAAGCACTACAATAGTTTACACAG CAAGCGGCCGTGCCAACGAAAAGCGGCACCCGCACAGGCCCGCAGGGGGT TGTTTAACCACCCGACAGTTGTGTGCTCGAACGGACGCGCGTAACTTGTC AGGCACACAACGGGTACCGATTTCGTTTTGGCGTTTTTTTTCTTCACCGG CACGCGGTGTTTACAACGTACAGTACATACAGACTAGACACGTTGTCGTA GGACAGCAAAGCCTGTCAACGGGGCTCGCTGTGGCCTCGTTGCTCTCTCC CCCGTAATCGACGTAGATGGAGCTCACACGACTGTATATGCGACCTAGTG ATCTAGGCGGCCCACCGAATGAATGTCTCTGGGCGCGTGTTATTCCCCTC GTCGTGGCAGGGTGCTTGCAGCCGGAGCTACGGTGGTCTTCGCGAGTGAC TTGAACAGCATGAAGAACGTTCGCAAGTTGACGTGAGTGTTCCACCTTTT AAGATACACGATATCACTATTTTTCGAGCGCGAGACTTCTCCGTACCCGG GGGGAGTAAACAACAACCTGGGATTCTTGCCTCCATGAGTTGCCCTTGGT TTTGGCTGTGAGACCGTTTGAGGGATGTTTGTCATACGCCGTCAATCAGC TACGTTCGCATTTGGCCAGCTGTTGCCAATCAGTTACGTTCTTTATGTTC GGGATAAGTCTTGGGAGTCGAAGCTGGCAAATTGTCGTAAAGATTTTTCT ACGATGACATATAGTTTCGGCTCCCCTTGGCAGAACGTCATGCTTCCAAG GACGTACATGCTCCCCCACAGGGTGTTGATGCCGCTGGCGAAGACACAAT GACTGCTTGGGGCAACCCGGCGAATAGAGCACTCCATTACCCAGCAAGAG AGGCGCTATCAACGTCCCCGTCCCCCTTCTTGCTCTCGCTCCTCTCTGGA TTGTGAGAACCCAACACACAACCGCCAGGTTGAAAAGCCTCCCTAAGAAC TGTTTAAAATTAGGTGTTTGTTTCCCTTCCCCGCCCTCCTCCACAACCGC GCTGGAGAAGAAGACGGGCCCAAGTGTTTCCCTTAAAGCTGTTGGTTTCC CTTTCCCGTCCTCCTCCAGAACCATGCTCGCGGAAGAGGGCTGGCCCGAG GGGTTCATCAAGAAGGTTCCGCTGTACCTGTCGGTGTTCTCGACGGGACA CAACCGGCTGCTCCGGCTTCCCTTGACCGCGGCAAAGAAGCTGTCGTTCG CGGTAGTGCGGAGGCTCGGGAAGGGGATGCCCACGGTGTCGGGGGCGGAG ACGTGGGCTTTCAAGAACACCATGCTCGCGGTGCAGGTGTGGCGGTTCAC ACCGCGTCGCAAGAGATTGGTGGCCAAATTTTTCTCACGGGGGGGATGTA GTACACCCTTGTTGGATGAGAGGTTTAGGTATTGTCATTTTTTCCCCGGC AGCCGTGCGTGCGTCTGTTGAAACATGCCGCGAAAGTTCAATCGCCTCGA CCTGGTCTGATGCGTCGTGTTTTGGAGTGCATGCCGGGCTGCAAAAACGT ACGGTGTTCTGCTCGGTTCGTCGTGTGGTAAAAACTGGCAGCATCTTGTG GTCGGAGCTTCAACGGAGAAGCGAGATGTCCTCGTGATGAGCCAGCCACC TTAAGGGCGAAGCGTTGTCAAGGTCGATACTGTGACAGACCTATCGATGA AGCGGTGCTCATGAATGACAAGAGACGTGGTATGGGTTTTACGGTGATCT GTGCAATCTCTTCACGACAGGAGCTCCTCCTGGCGGCAACGTCTCACGGC CTAGCCACGTGTCCGATGGAGGGTTTCGACATGAGAAGGTTGCGAAAGGC GTTACGCATCCCGTTGCGGTACTCTGTCCCGATCGTGGTCAGCATCGGCT ACCCGTCGGACGAACGGCGAGAAATCAAGACCCTCAGGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13726:263..3553-

>mRNA_E-fasciculatus_F_contig13726.2755.1 ID=mRNA_E-fasciculatus_F_contig13726.2755.1|Name=mRNA_E-fasciculatus_F_contig13726.2755.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13726:263..3553- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCCGGACGACGTCTTGAAGAAGGTGCCGGACGACGTCTTGAAGAAGGT
GTTGGCTCTAGTGTTGCGAGCCCCCTCCGGGTTCAACATCCAGCCGTACG
AATGCATCGTGGTGACGTCCGACGAGGCCAAGCAAAAGCTCAGCAAGGCC
ATGTTAGGCCCGAACCGAGAGAGGTGTTGGCTCTAGTGTTGCGAGCCCCC
TCCGGGTTCAACATCCAGCCGTACGAATGCATCGTGGTGACGTCCGACGA
GGCCAAGCAAAAGCTCAGCAAGGCCATGTTAGGCCCGAACCGAGAGAGGG
TGCTTGCAGCCGGAGCTACGGTGGTCTTCGCGAGTGACTTGAACAGCATG
AAGAACGTTCGCAAGTTGACGGTGCTTGCAGCCGGAGCTACGGTGGTCTT
CGCGAGTGACTTGAACAGCATGAAGAACGTTCGCAAGTTGACAACCATGC
TCGCGGAAGAGGGCTGGCCCGAGGGGTTCATCAAGAAGGTTCCGCTGTAC
CTGTCGGTGTTCTCGACGGGACACAACCGGCTGCTCCGGCTTCCCTTGAC
CGCGGCAAAGAAGCTGTCGTTCGCGGTAGTGCGGAGGCTCGGGAAGGGGA
TGCCCACGGTGTCGGGGGCGGAGACGTGGGCTTTCAAGAACACCATGCTC
GCGGTGCAGAACCATGCTCGCGGAAGAGGGCTGGCCCGAGGGGTTCATCA
AGAAGGTTCCGCTGTACCTGTCGGTGTTCTCGACGGGACACAACCGGCTG
CTCCGGCTTCCCTTGACCGCGGCAAAGAAGCTGTCGTTCGCGGTAGTGCG
GAGGCTCGGGAAGGGGATGCCCACGGTGTCGGGGGCGGAGACGTGGGCTT
TCAAGAACACCATGCTCGCGGTGCAGGAGCTCCTCCTGGCGGCAACGTCT
CACGGCCTAGCCACGTGTCCGATGGAGGGTTTCGACATGAGAAGGTTGCG
AAAGGCGTTACGCATCCCGTTGCGGTACTCTGTCCCGATCGTGGTCAGCA
TCGGCTACCCGTCGGACGAACGGCGAGAAATCAAGACCCTCAGGTAGGAG
CTCCTCCTGGCGGCAACGTCTCACGGCCTAGCCACGTGTCCGATGGAGGG
TTTCGACATGAGAAGGTTGCGAAAGGCGTTACGCATCCCGTTGCGGTACT
CTGTCCCGATCGTGGTCAGCATCGGCTACCCGTCGGACGAACGGCGAGAA
ATCAAGACCCTCAGGTAG
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