mRNA_E-fasciculatus_F_contig13660.2715.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: D7FZE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE3_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 4.580e-183 Identity = 257/282 (91.13%), Postives = 266/282 (94.33%), Query Frame = 1
Query: 1 FVPTTTINNDNS-AMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRVMSGGHARDVPLETEIDHGKVLFVSAIHKPDLSAEARTNAVRPTERLGARGRFTPGVRRWAGGKPRNVPLETEIDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGARGRFTPGGRRWAGGEPRDVPLPRLRDPGTILFESDSERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQMQAAFASELELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 843
FV TTINNDNS AMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVR+MSGGHARDVPLE E+DHGKVLFVSAIHKPDLS EARTNAVRP ERLGARGRFTPG RRWAGGKPR+VPLE E+DHGKVL VSAVHKPDLSAEAR NA RPTERLG+RGRFT G RRW GGEPRDVPLPR+RDPGT+LFES SERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQ+QAAFASE+E LWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY
Sbjct: 276 FVAITTINNDNSSAMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSTEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLLVSAVHKPDLSAEARINATRPTERLGSRGRFTAGVRRWGGGEPRDVPLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQVQAAFASEVEQLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 557
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: D7G1I1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G1I1_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 3.200e-178 Identity = 241/268 (89.93%), Postives = 253/268 (94.40%), Query Frame = 1
Query: 40 MTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRVMSGGHARDVPLETEIDHGKVLFVSAIHKPDLSAEARTNAVRPTERLGARGRFTPGVRRWAGGKPRNVPLETEIDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGARGRFTPGGRRWAGGEPRDVPLPRLRDPGTILFESDSERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQMQAAFASELELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 843
MTSV K DLSGLPTFNVAGGRPDERFGTRGSFTRGVR+MSGGH RDVP E E+DHGKVLFVSA+HKPDLSAEARTNAVRPTERLG RGRFTPG RRW GGKPR+VPLE E+DHGKVLFVSAVHKPDLSAEARTNA+RP ERLG+RGRFT G R W GG+PRDVPLPRLRDPGT+LFES SERSRPS+SFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQ+QAAFASE+ELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY
Sbjct: 1 MTSVCKSDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHTRDVPREAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGTRGRFTPGGRRWVGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAIRPKERLGSRGRFTAGVRGWVGGKPRDVPLPRLRDPGTVLFESASERSRPSMSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQVQAAFASEVELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 268
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: A0A6H5KBU2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU2_9PHAE) HSP 1 Score: 374 bits (960), Expect = 3.640e-129 Identity = 191/268 (71.27%), Postives = 201/268 (75.00%), Query Frame = 1
Query: 40 MTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRVMSGGHARDVPLETEIDHGKVLFVSAIHKPDLSAEARTNAVRPTERLGARGRFTPGVRRWAGGKPRNVPLETEIDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGARGRFTPGGRRWAGGEPRDVPLPRLRDPGTILFESDSERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQMQAAFASELELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 843
MTSVHKPDLSGLP FNVAGGRPDERFGTRGSFTRGV +MSGGHARDVPLE E+DHGKVLFVSA+HKPDLSAEARTNAVRPTERLG+RGRFT GVRRWAGG EPRDVPLPR+ DPGT+LFES SERSRPSLSFS ETNVSGGR+DERHGRLGSFEHGVVEARGGPLQ+QAAFA ++E LWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY
Sbjct: 1 MTSVHKPDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGG----------------------------------------------------------EPRDVPLPRVCDPGTVLFESASERSRPSLSFSRETNVSGGRQDERHGRLGSFEHGVVEARGGPLQVQAAFARDVEQLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 210
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: A0A6H5KAW1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW1_9PHAE) HSP 1 Score: 367 bits (942), Expect = 1.860e-126 Identity = 182/202 (90.10%), Postives = 189/202 (93.56%), Query Frame = 1
Query: 1 FVPTTTINNDN-SAMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRVMSGGHARDVPLETEIDHGKVLFVSAIHKPDLSAEARTNAVRPTERLGARGRFTPGVRRWAGGKPRNVPLETEIDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGARGRFTPGGRRWAGGEPRDVPLPRLRDPGTILFESDSERSRPSLS 603
FVP TTINNDN AMTSVHKPDLSGLP FNVAGGRPDERFGTRGSFTRGV +MSGGHARDVPLE E+DHGKVLFVSAIHKPDLSAEARTNAVRP ERLGARGRFTPG RRWAGGKPR+VPLE E+DHGKVLFVSAVHKPDLSAEARTNAVRPTERLG+RGRFT G RRWAGGEPRDVPLPR+ DPGT+LFES SERSRPSLS
Sbjct: 5 FVPITTINNDNIRAMTSVHKPDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSAEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLS 206
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: A0A6H5KZP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP0_9PHAE) HSP 1 Score: 275 bits (702), Expect = 9.300e-90 Identity = 158/267 (59.18%), Postives = 177/267 (66.29%), Query Frame = 1
Query: 40 MTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRVMSGGHARDVPLETEIDHGKVLFVSAIHKPDLSAEARTNAVRPTERLGARGRFTPGVRRWAGGKPRNV-PLETEIDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGARGRFTPGGRRWAGGEPRDVPLPRLRDPGTILFESDSERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQMQAAFASELELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMP 837
MTSV+KPDLSGLPTFNVAGGRPD RFGTRGSFT GVR+MSGGHAR VP E E+DHG V A+ +R RG P +R G PRN PL H + + P A+RPTERLG+RGRFT G R WAGG+P DV LPR+RDPGT+LFES SERSRPSLSFSGETNVSGG+EDE ARGGPLQ+QAAF SE+ELLW EGGQ+E+KYRRCGPSH+V GVSI G MP
Sbjct: 1 MTSVYKPDLSGLPTFNVAGGRPDGRFGTRGSFTLGVRIMSGGHARGVPREAEVDHGNV------------RRAQAGPLR-------RG---PHLRHPPHGAPRNPGPL-----HAGRTSLGRISPP------WPTAIRPTERLGSRGRFTSGIRGWAGGKPPDVTLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGKEDE--------------ARGGPLQVQAAFTSEVELLWREGGQREHKYRRCGPSHYVTGVSIPFGDMP 220
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: A0A836CPV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPV2_9STRA) HSP 1 Score: 150 bits (380), Expect = 8.780e-41 Identity = 107/257 (41.63%), Postives = 135/257 (52.53%), Query Frame = 1
Query: 85 NVAGGRPDERFGTRGSFTRGVRVMSGGHARDV-PLETEIDHGKVLFVSAIHKPDLSAEARTNAVRPTERLGARGRFTPGVRRWAGGKPRNVPLETEIDHGKVLFVSAVHKPDLSAEARTNAV--RPTERLGARGRFTPGGRRWAGGEPRDVPLPR-LRDPGTILFESDSERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQMQAAFASELELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 843
N GGRPDER G +G +T GV V GG DV P + +HG VLF SA +P+L E R + ER G G W +V L+ E++HG +L +PDLS E RTNA R TERLGARG FTPG AGG RDVP+P + + GT+LF + + + + + G DER GR GSFEHG R P AA LW E GQ+ RR H++AG S+++GG PVY
Sbjct: 13 NAVGGRPDERHGFQGGWTHGVTVFCGGVPHDVRPPKETTNHGTVLFTSASLRPNLEDELRIKSCSDGEREGRSG----SQAHWTHPAHDDVQLD-ELNHGTILATFPHLRPDLSYEGRTNAAGGRATERLGARGSFTPGRAIRAGGPARDVPVPAPILNRGTVLFTLATLACDAAAAAA--PALKPGTTDERVGRAGSFEHGDAHLRM-PTAADAA-------LWREDGQRGG--RRYAGGHWLAGASVMAGGAPVY 252
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Match: A0A835YKS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.650e-15 Identity = 59/147 (40.14%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 58 PDLSGLPTFNVAGGRPDERFGTRGSFTRGVRVMSGGHARDVPLETEIDHGKVLFVSAIHKPDLSAEARTNAV--RPTERLGARGRFTPGVRRWAGGKPRNVPLETEIDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGARGRFTPG 492
PD+ G + G DER G G+ +R H P E++HG VL +P+++ RTN RPTERLG RG FTPGV AGG R+VP+ E HG VL+ SA +PD S E R ER G G F G
Sbjct: 59 PDMRG--ELRLKTGAVDERQGVSGAQPHWIRPA---HDAVAP---ELNHGTVLATFPHLQPNMAYSYRTNIAGGRPTERLGVRGGFTPGVVICAGGAARDVPIAAERHHGTVLYTSAALRPDASQEPRLKQGTCYERQGRVGSFEHG 197 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13660.2715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13660.2715.1 >prot_E-fasciculatus_F_contig13660.2715.1 ID=prot_E-fasciculatus_F_contig13660.2715.1|Name=mRNA_E-fasciculatus_F_contig13660.2715.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=282bp FVPTTTINNDNSAMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRback to top mRNA from alignment at E-fasciculatus_F_contig13660:1703..2548- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13660.2715.1 ID=mRNA_E-fasciculatus_F_contig13660.2715.1|Name=mRNA_E-fasciculatus_F_contig13660.2715.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=846bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13660:1703..2548- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13660:1703..2548- >mRNA_E-fasciculatus_F_contig13660.2715.1 ID=mRNA_E-fasciculatus_F_contig13660.2715.1|Name=mRNA_E-fasciculatus_F_contig13660.2715.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1692bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13660:1703..2548- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |