mRNA_E-fasciculatus_F_contig13620.2687.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: D7G1P8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P8_ECTSI) HSP 1 Score: 323 bits (827), Expect = 3.690e-106 Identity = 170/183 (92.90%), Postives = 175/183 (95.63%), Query Frame = 1
Query: 1 KGITVKDEPGLSLVRLFGPGVGDEKVTVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQPQGKGGEXXXXXGDEDDMMGPGYRFTATITKGAKKMVLSGSATDTIAVHGIRINPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
KGITVKDEPGLSLVRLFGPGVGDEKV+VEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQ GK XXXXX EDDM+GPGYRFTATITKGAKKMVLSGSATDTIAVHGIRINPA+VEWD SLYRGPDFNELDPDLQDAL++YLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK
Sbjct: 80 KGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQ--GKXXXXXXXXXXEDDMIGPGYRFTATITKGAKKMVLSGSATDTIAVHGIRINPANVEWDFSLYRGPDFNELDPDLQDALYDYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 260
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: A0A7S2XZ29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ29_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.580e-16 Identity = 63/176 (35.80%), Postives = 90/176 (51.14%), Query Frame = 1
Query: 28 GLSLVRLF--GPGVGDEKVTVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQPQGKGGEXXXXXGDEDDMMGPGYRFTATITKGAKKMVLSGSATDTIAVHGIRINPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
G+S V +F P G EKV+V+F+C E G +SGE + +GGE G+ ++ F + KG +K+V + A D+I + + I + D + Y GP+F+ L+ DLQDA +YL R ID DLA +I M++D KEQ EY WL A FVK
Sbjct: 100 GMSTVEVFIKNPPPG-EKVSVQFNCVSEMPG--------------GEDSGEMDEEVAEGGEQGTEEGEMEEEPPAFKPFMVKVEKGQQKLVFNLLAFDSIVIDSVYIEGGD-DSDMNQYLGPEFDSLETDLQDAFADYLAARGIDADLATWIVMFSDYKEQYEYMKWLETTAAFVK 259
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: A0A7S1GI20_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GI20_CYCTE) HSP 1 Score: 83.2 bits (204), Expect = 2.690e-15 Identity = 57/168 (33.93%), Postives = 84/168 (50.00%), Query Frame = 1
Query: 73 KVTVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQPQGKGGEXXXXXGDEDDMMGPGYRFTATITKGAKKMVLSGSATDTIAV-HGIRINPASVEWDSS-------LYRGPDFNELDPDLQDALHEYLKER-NIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
KVTV F C +D ++DD D + + G+ D DD P +FT T+++ K MVLS + + AV + + VE S LY+GP+F EL+ D+QDA H +++E ID D+AAFI MY D KEQ +Y W+ +V ++
Sbjct: 21 KVTVVFHC----------QDTMDDDVDFAFDDGD----------------DGDDEPSPAIKFTLTVSRAGKTMVLSCLSEEARAVVKSVAVTMEDVETIHSTGRISDQLYQGPEFTELEGDVQDAFHSFVEEDCGIDTDVAAFIAMYVDYKEQMQYVRWMRQVQSILQ 162
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: D0MS15_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS15_PHYIT) HSP 1 Score: 82.4 bits (202), Expect = 2.360e-14 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 244 PGYRFTATITKGAKKMVLSGSATDTIAVHGIRI--NPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
PG RFTA IT+ K M A+ + V +R + A D +LY GP+F +L+ D+QD + YL ERNIDD+LA FI +AD KEQ EY +L + F+K
Sbjct: 131 PGIRFTADITRDDKGMQFDCVASSNLTVERLRYLDDFAKNAEDETLYFGPNFIDLELDVQDQFYSYLAERNIDDELAQFITQFADYKEQREYLAFLEDTETFIK 234
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: A0A6A3T160_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T160_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 8.170e-14 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 244 PGYRFTATITKGAKKMVLSGSATDTIAVHGIR-INP-ASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
PG RFTA IT+ K + A+ + V +R +N A D +LY GP+F +L+ D+QD + YL +R IDD+LA FI +AD KEQ EYT +L + FVK
Sbjct: 131 PGVRFTADITRDNKGLQFDCVASSNLTVERVRYLNDFAKDAEDETLYFGPNFIDLELDVQDQFYSYLAQRKIDDELAQFITQFADLKEQREYTAFLEDAESFVK 234
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: A0A7S3XN20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN20_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 1.260e-13 Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1
Query: 256 FTATITKGAKKMVLSGSATDTIAVHGIR-INPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFV 546
F T+ KG +++ A D++AV ++ I P Y GP+F++LDPDLQ A +YL R + DDL A++ MYAD +EQ EY WL V FV
Sbjct: 183 FAVTVAKGEERLRFYCRALDSVAVDAVQHIRPGQDPDAPESYEGPNFDDLDPDLQGAFLDYLAARGVGDDLGAWVVMYADYREQREYVGWLESVKGFV 280
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: W2NNX2_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NNX2_PHYPR) HSP 1 Score: 80.5 bits (197), Expect = 1.480e-13 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 244 PGYRFTATITKGAKKMVLSGSATDTIAVHGIRI--NPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
PG RFTA IT+ K M A+ + V +R + A D +LY GP+F +L+ D+QD + +L ERNIDD+LA FI +AD KEQ EY +L + FVK
Sbjct: 148 PGIRFTADITRDNKGMQFDCVASSNLTVERLRYLKDFAKDAEDETLYFGPNFIDLELDVQDQFYNFLAERNIDDELAQFITQFADFKEQREYLAFLEDTETFVK 251
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: W9VXA3_9EURO (Uncharacterized protein n=4 Tax=Herpotrichiellaceae TaxID=43219 RepID=W9VXA3_9EURO) HSP 1 Score: 80.9 bits (198), Expect = 2.410e-13 Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 226 EDDMMGPGY--RFTATITK-GAKKMVLSGSATD-TIAVHGIRINPASVEWDS----------SLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
EDD P Y + T TITK G K + + A D TI + + P D+ SLY GP +ELDP+LQ L +YL+ER ID++LA+F+ Y D KEQ EY WL ++ FVK
Sbjct: 187 EDDQPSPAYPAQLTITITKPGNKAIEIRAVAQDGTIEIENLSFFPKESLLDAQSTKDAAEARSLYAGPPVDELDPELQQMLQQYLEERGIDEELASFLPEYMDYKEQKEYVKWLEDLENFVK 308
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: A0A3M6VEH5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEH5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.720e-13 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 244 PGYRFTATITKGAKKMVLSGSATDTIAVHGIRI--NPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
PG FTA +T+ K + A + + +R + A + D +LY GP+F +L+ D+QD + YL ER IDD+LA FI +AD KEQ EY +L + A FVK
Sbjct: 129 PGVHFTADVTRDNKGLQFDCVAGSNLTIERVRYLKDFAKDDEDETLYFGPNFIDLELDVQDKFYSYLAERKIDDELAQFISQFADLKEQREYLTFLEDAAAFVK 232
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Match: G4YEF0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEF0_PHYSP) HSP 1 Score: 79.3 bits (194), Expect = 2.810e-13 Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 244 PGYRFTATITKGAKKMVLSGSATDTIAVHGIRI--NPASVEWDSSLYRGPDFNELDPDLQDALHEYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 549
PG RFTA IT+ + + A+ + V +R + A D +LY GP+F +L+ D+QD + YL +R IDD+LA FI +AD KEQ EYT +L + FVK
Sbjct: 131 PGVRFTADITRDNQGLQFDCVASSNVTVERVRYLADFAKEAEDETLYFGPNFIDLELDVQDHFYRYLADRKIDDELAQFITQFADLKEQREYTAFLEDAETFVK 234 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13620.2687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13620.2687.1 >prot_E-fasciculatus_F_contig13620.2687.1 ID=prot_E-fasciculatus_F_contig13620.2687.1|Name=mRNA_E-fasciculatus_F_contig13620.2687.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=106bp MMGPGYRFTATITKGAKKMVLSGSATDTIAVHGIRINPASVEWDSSLYRGback to top mRNA from alignment at E-fasciculatus_F_contig13620:365..3552+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13620.2687.1 ID=mRNA_E-fasciculatus_F_contig13620.2687.1|Name=mRNA_E-fasciculatus_F_contig13620.2687.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3188bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13620:365..3552+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13620:365..3552+ >mRNA_E-fasciculatus_F_contig13620.2687.1 ID=mRNA_E-fasciculatus_F_contig13620.2687.1|Name=mRNA_E-fasciculatus_F_contig13620.2687.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=636bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13620:365..3552+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |