mRNA_E-fasciculatus_F_contig13606.2682.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: A0A6H5L9K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K6_9PHAE) HSP 1 Score: 530 bits (1365), Expect = 4.370e-174 Identity = 435/476 (91.39%), Postives = 444/476 (93.28%), Query Frame = 1
Query: 1 ERNNKDARVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRDRKPSEKAVANAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKEGIETDSSEEEXXXXXXXXXXXQHAAEALPADEVSDEARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EIDMEGLEEVAGEPGARLLVAAGLRTLGQLADRDEEDLARQLATLQQXXXXXXXEKDVGGEGSAAXXXXXXXXXXXXXXXXXSSSGEKARVTAEEVSEWVQGARGEELDEIMADIVGGNEDLIEALEEVSVSTPRDLVRMGAFPDVLVGAVRDKVGAERFAPLAGLITAEAVEAWRRKGDRLLEQRPWLELWVHQG 1419
+++ DARVRAALGGWYT EASATQRRLGDGESVAL+ISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETR+RKPSEKAVANA AEE XXXXXXXXXXXXXXXXXXXXXXXX EGIETDSS XXXXXXX QHAAE+LPADEVS+EARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EIDMEGL EVAGEPGA LLVAAGLRTLGQLADRDEEDLARQLA LQQXXXXXX E+D G EGSA XXXXXXXXXXXXXXXXX GEKARVTAEEVSEWVQGARGEELDEIMADIVGGNED+IEALEEVSVSTPRDLVRMGAFPDVLVGAVRDKVGAERFAPLAGLIT EAVEAWRRKGDRLLEQRPWLELWVHQG
Sbjct: 385 DQSRADARVRAALGGWYTVEASATQRRLGDGESVALNISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRNRKPSEKAVANATAEEAERXXXXXXXXXXXXXXXXXXXXXXXX----EGIETDSS------XXXXXXXPQHAAESLPADEVSEEARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDMEGLVEVAGEPGAGLLVAAGLRTLGQLADRDEEDLARQLAALQQXXXXXX-ERDAG-EGSAXXXXXXXXXXXXXXXXXXXX-GEKARVTAEEVSEWVQGARGEELDEIMADIVGGNEDVIEALEEVSVSTPRDLVRMGAFPDVLVGAVRDKVGAERFAPLAGLITTEAVEAWRRKGDRLLEQRPWLELWVHQG 847
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: D8LTC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC8_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 3.420e-136 Identity = 386/428 (90.19%), Postives = 392/428 (91.59%), Query Frame = 1
Query: 1 ERNNKDARVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRDRKPSEKAVANAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKEGIETDSSEEEXXXXXXXXXXXQHAAEALPADEVSDEARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EIDMEGLEEVAGEPGARLLVAAGLRTLGQLADRDEEDLARQLATLQQXXXXXXXEKDVGGEGSAAXXXXXXXXXXXXXXXXXSSSGEKARVTAEEVSEWVQGARGEELDEIMADIVGGNEDLIEALEEVSVSTPRDLVRMGAFPDVLVG 1278
+++ DARVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRDRKPSEKAVANAAAEE XXXXXXXXXXXXXXXXXXXXXXX EGIETDSS XXXXXXXXX HAAE+LPADEVS+EARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EIDMEGL EVAGEPGA LLVAAGLRTLGQLADRDEEDLARQLA LQQXXXXXXX XXXXXXXXXXXXXXXXX EKARVTAEEVSEWVQGARGEELDEIMADIVGGNED+IEALEEVSVSTPRDLVRMGAFPDVLVG
Sbjct: 273 DQSRADARVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRDRKPSEKAVANAAAEEAERLXXXXXXXXXXXXXXXXXXXXXXX----EGIETDSS-----XXXXXXXXXPHAAESLPADEVSEEARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDMEGLVEVAGEPGAGLLVAAGLRTLGQLADRDEEDLARQLAALQQXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXEKARVTAEEVSEWVQGARGEELDEIMADIVGGNEDVIEALEEVSVSTPRDLVRMGAFPDVLVG 687
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: W7TPX4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPX4_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.300e-23 Identity = 130/484 (26.86%), Postives = 187/484 (38.64%), Query Frame = 1
Query: 19 ARVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHW-------GGD------VPAALRLAAPDVDWGFVETRDRKPSEKAVANAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKEGIETDSSEEEXXXXXXXXXXXQHAAEAL-----PADEVSDEARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDMEGLEEVAGEPGARLLVAAGLRTL--GQLADRDEEDLARQLATLQQXXXXXXXEKDVGGEGSAAXXXXXXXXXXXXXXXXXSSSGEKARVTAEEVSEWVQGARGEELDEIMADIVGGNEDLIEALEEVSVSTPRDLVRMGAFPDVLVGAVRDKVGAERFAPL-AGLITAEAVEAWRRKGDRLLEQRPWLELW 1407
ARV A GG Y+A+AS +RRL DG L + + KG G +S + V+ + + Q+ VVR + D + REMLKP N AGCSPR+FWSL+ H+ GG AALR P+ DW F+ R RK S+KA N A EE XXXXXXXXX R+ + D+ + + + P +E E EID + EEV+ + R+L + L LA D E+L +L D + EV WV + +ELDE+M + GG+EDL+EA+E V V+TP+D+ G P + + ++ E+ A + A L EAV+ + + ++L+ + WLE W
Sbjct: 216 ARVAAVQGGRYSAKASIEERRL-DGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLADVDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREXXXXXXXXXMWREARGAG------RQRVVAADAHSKGKGRKDPASGRTTSVGDTIDQAGTPCEEAVSEV---------------LDRERRAQAAVARSHSFHGAPAQIVEAARKAEGREGGRKEMEERASLVAVDGESGEIDSDFPEEVS-DAWVRVLRSPSFMLLDCAALAGADAEELVLRLQKHHAAGAKPLAPSDP---------------------------------SLSEVQGWVSACQNDELDEMMMRLAGGDEDLLEAMECVHVATPKDVRLWGMVPGAFLDMLARELSEEKMAHVQAKLPDVEAVQVLKERAEKLMAENAWLESW 643
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: A0A7S4N5T5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5T5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 9.020e-13 Identity = 61/172 (35.47%), Postives = 80/172 (46.51%), Query Frame = 1
Query: 1 ERNNKDARVRAALGGWYT---AEASATQRRLGDGESVALD---ISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPES---------------------REMLKPHNFAGCSPRMFWSLVQHWGG--DVPAALRLAAPDVDWGFVETRDRKPSEKAVAN-----AAAEE 414
ER+ RV A YT A +SA+ RLG G + + ++KG + E VD I E + V+R + DP+S REML+P N A SPR+FWSL H+ D ALRL PD+DW ++ R R SEKA N AAA+E
Sbjct: 10 ERSRAVVRVDAVRADKYTMQPAPSSASGGRLGGGGDAEVGRYAVKYAKGVEGRGDYEEFVDIIGLEALQGVIRQVYSDPDSASRDDPNGVEGAEEDGGVSGPREMLRPANMAQLSPRVFWSLAHHFSSAADTEEALRLCCPDLDWSYLSGRTRVLSEKARDNLRQERAAAQE 181
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: I2CR47_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR47_NANGC) HSP 1 Score: 71.2 bits (173), Expect = 7.520e-10 Identity = 38/78 (48.72%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 220 ESREMLKPHNFAGCSPRMFWSLVQHW-------GGD------VPAALRLAAPDVDWGFVETRDRKPSEKAVANAAAEE 414
+ REMLKP N AGCSPR+FWSL+ H+ GG AALR P+ DW F+ R RK S+KA N A EE
Sbjct: 1 DGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEE 78
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: A0A7S0NR05_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NR05_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 1.180e-9 Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 22 RVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIP--REQVSAVVRMIARDPE--SREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRDRKPSEKA 390
R +AAL G + R DG + + F G K + E + +P R V AV+ + + E S +LKP A SPR+FW++V H+GGDV LR P +W F++ R+++PSEKA
Sbjct: 216 RFKAALAGTFEMTQGTGAYRA-DGTATECIVRFKTGRMFKEETFELLS-VPELRGVVQAVLDQFSAEAEASSLHLLKPFKMAHVSPRVFWNIVHHFGGDVSQGLRQLVPAQEWVFLDEREKRPSEKA 340
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Match: A0A7S4BE44_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BE44_CHRCT) HSP 1 Score: 65.5 bits (158), Expect = 2.570e-7 Identity = 44/141 (31.21%), Postives = 66/141 (46.81%), Query Frame = 1
Query: 22 RVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIP-REQVSAVVRMIARDPESRE--------------MLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGFVETRDRKPSEKAVAN 399
R +AAL G + + RR DG++ +F G + + + R V AV+ A+D S +L+P A SPR+FW++V+H+GGDV A LR P DW F+ R ++ S+KA N
Sbjct: 236 RFKAALAGDFELRDADDARRA-DGDASEAIAAFKVGRSVREERFCLLSLAELRGVVQAVLETFAKDEASASAMGAPPSAALSSLHLLQPFKMAHVSPRVFWNMVKHFGGDVGAGLRQLLPAQDWSFLGERQKRRSDKAAEN 375 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13606.2682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13606.2682.1 >prot_E-fasciculatus_F_contig13606.2682.1 ID=prot_E-fasciculatus_F_contig13606.2682.1|Name=mRNA_E-fasciculatus_F_contig13606.2682.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=407bp MIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGDVPAALRLAAPDVDWGback to top mRNA from alignment at E-fasciculatus_F_contig13606:2..3557- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13606.2682.1 ID=mRNA_E-fasciculatus_F_contig13606.2682.1|Name=mRNA_E-fasciculatus_F_contig13606.2682.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3556bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13606:2..3557- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13606:2..3557- >mRNA_E-fasciculatus_F_contig13606.2682.1 ID=mRNA_E-fasciculatus_F_contig13606.2682.1|Name=mRNA_E-fasciculatus_F_contig13606.2682.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2442bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13606:2..3557- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |