mRNA_E-fasciculatus_F_contig13567.2653.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A6H5LEA1_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA1_9PHAE) HSP 1 Score: 766 bits (1979), Expect = 3.470e-273 Identity = 414/458 (90.39%), Postives = 422/458 (92.14%), Query Frame = 1
Query: 1 LNKGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGSPPSHRPMYGCHMLSRVLLGEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDYSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVGGDGGGESGPAKKGILPIVAMDACPCPPALLFRDGDVYEXXXXXXXXXXXLTLVRSDGGVVEQGRAAGEEVVGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQAL--------GVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSV----------------ILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
L +GVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNG+PPSHRPMYGCH+LSRVL GEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYD+SRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGV GDGGGES PA+ GILPIVAMD+CPCPPALLFRDGDVYE XXXXXXXXXXLTLVRSDGGVVEQGRAAGE V GGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTE+ GVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNL+CFDEIDALCRSRGSLSGDTSGVRDSV ILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV
Sbjct: 167 LLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGNPPSHRPMYGCHILSRVLAGEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESSPAENGILPIVAMDSCPCPPALLFRDGDVYEEXXXXXXXXXXLTLVRSDGGVVEQGRAAGEVVGGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTEVGHGTARYGAVRCGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLICFDEIDALCRSRGSLSGDTSGVRDSVVNQARQIKRRGGGVEVILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 624
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A836CBN6_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN6_9STRA) HSP 1 Score: 353 bits (907), Expect = 3.430e-111 Identity = 213/406 (52.46%), Postives = 254/406 (62.56%), Query Frame = 1
Query: 49 RHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGSPPSHRPMYGCHMLSRVLLGEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDYSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVGGDGGGESGPAKKGILPIVAMDACPCPPALLFRD-----GDVYEXXXXXXXXXXXLTLVRSDGGVVEQGRAAGEEVVGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSV---ILSKMDGLVNLQNVLVVG 1242
R G++LAWSWL LS P+RV + + G GV LTVLP G PP+HRPM G HMLS V G+VEQVK+N +R+I R+ H+ ETP+W+SFGGG RRL N S A ILEV+ Y RG + A G G+AE AEA+ G + + A PC P +LFR GD L L VVG LA VGGLD QLE+IVRRVL+TR++P ++RQALGV HVRGLLL+GPPGCGKTLLAREL+RRL ARPP+LVSGPE+LDKWVGEAERKVR LF AE +HERCV+ G DPA LPL+++CFDE+DALCR+RGSL GDTSGVRDSV IL+KMDGLV LQN++ G
Sbjct: 153 RGGRGASLAWSWLGLSTMPLRVMLH--QGGGFGVLLTVLPPG-AKPPAHRPMIGAHMLSIVCQGDVEQVKANGQRIINRTRHTPETPIWNSFGGGVRRLANMSVTTAYILEVLFYG-KRGPPEYDTRAPDG----GAAERNAEADEF------------------ILSGPRAMATLSAPPCDPEVLFRSVGEEGGDEGGEVLVIRGREGSLLLGXXXXXXXXXXXXXXXXVVGA--------SLATSVGGLDTQLEEIVRRVLATRALPADVRQALGVSHVRGLLLYGPPGCGKTLLARELARRLKARPPQLVSGPEVLDKWVGEAERKVRALFAAAEEEHERCVRGGGDPADLPLHVICFDELDALCRTRGSLLGDTSGVRDSVVNQILAKMDGLVGLQNLVSGG 524
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A1E7FWZ3_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWZ3_9STRA) HSP 1 Score: 216 bits (551), Expect = 8.490e-65 Identity = 117/185 (63.24%), Postives = 148/185 (80.00%), Query Frame = 1
Query: 760 GLACD-VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
GLA + VGGLDGQL DIVRRVL++R+ +L + LGV HVRG+LL GPPGCGKTLLARELS LGAR P++V+GPEILDK++GEAE+ VR LF AEL++E Q+G+D A L+++ DE+DA+ R RGS+SGD++GVRDSV+ LSKMDG+ NVLV+G+TNR ELLD AL+RPGR+EV
Sbjct: 2 GLAFEKVGGLDGQLNDIVRRVLASRA-NRDLSRRLGVNHVRGILLSGPPGCGKTLLARELSEMLGAREPQIVNGPEILDKFIGEAEKNVRQLFEPAELEYE---QVGDDSA---LHVIILDELDAIARRRGSVSGDSTGVRDSVVNQLLSKMDGVKQANNVLVIGLTNRPELLDPALVRPGRLEV 179
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A7S1ZM88_TRICV (Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM88_TRICV) HSP 1 Score: 209 bits (531), Expect = 1.280e-61 Identity = 113/179 (63.13%), Postives = 139/179 (77.65%), Query Frame = 1
Query: 775 VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
VGGLD QL+ I RRVL++R+ P R+ LGV HVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAE+KVR LF AE E MG+D A L+++ DE+DA+ R RGS++ DT+GVRDSV+ L+KMDG+ NVLVVG+TNR ELLD ALLRPGR+EV
Sbjct: 8 VGGLDSQLDSIARRVLASRANPAAARR-LGVSHVRGVLLSGPPGCGKTLLARELSRVLGAREPQIVNGPEILDKFIGEAEKKVRDLFAPAE---EEYALMGDDSA---LHIIILDEMDAIARRRGSMTSDTTGVRDSVVNQLLAKMDGVREAPNVLVVGLTNRPELLDPALLRPGRLEV 179
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A8J9TMG8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TMG8_PHATR) HSP 1 Score: 205 bits (521), Expect = 2.470e-60 Identity = 110/179 (61.45%), Postives = 140/179 (78.21%), Query Frame = 1
Query: 775 VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
VGGLD QLE I RRVL++R+ P R+ LGV HVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK++GEAER+VR LF AE +++ G+D A L+++ DE+DA+ R RG+++ DT+GVRDSV+ L+KMDG+ NVLVVG+TNR ELLD ALLRPGR+EV
Sbjct: 6 VGGLDVQLEAIARRVLASRANPAAARR-LGVSHVRGILLSGPPGCGKTLLARELARILGAREPQIVNGPEILDKYIGEAERRVRDLFAPAEQEYKVA---GDDSA---LHIIILDEMDAIARKRGTMTSDTTGVRDSVVNQLLAKMDGVREASNVLVVGLTNRPELLDPALLRPGRLEV 177
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A8J2SL94_9STRA (Vesicle-fusing ATPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL94_9STRA) HSP 1 Score: 219 bits (558), Expect = 4.520e-60 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1
Query: 745 LLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
LLT + L VGGL+ QL+ IVRRVL++R+ P E + LGVGHVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK+VGEAERKVR LF AE + Q+G+ A L++V FDE+DA+ R RGSL+GDT+GVRD V+ L+KMDG+V NVLVVG TNR EL+DEALLRPGR+EV
Sbjct: 313 LLTQEALRERVGGLEQQLDAIVRRVLASRASP-EAAKRLGVGHVRGVLLSGPPGCGKTLLARELARALGAREPQIVNGPEILDKFVGEAERKVRELFAPAEAEFR---QVGDASA---LHVVVFDEMDAIARRRGSLTGDTTGVRDGVVNQLLAKMDGVVEAPNVLVVGCTNRPELIDEALLRPGRLEV 494
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A7S3SLB9_EMIHU (Vesicle-fusing ATPase (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SLB9_EMIHU) HSP 1 Score: 210 bits (535), Expect = 5.100e-59 Identity = 115/185 (62.16%), Postives = 142/185 (76.76%), Query Frame = 1
Query: 757 DGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
D L+ VGGL+ QL+ IVRRVL++R+ P R+ LG+ HVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK+VGEAE KVR LF AE + + G+ A L+++ DE+DA+ + RGS SGD SGVRDSV+ LSKMDG+V NVLVVG+TNR ELLDEALLRPGR+EV
Sbjct: 299 DALSGSVGGLEAQLDAIVRRVLASRADPAAARR-LGISHVRGILLSGPPGCGKTLLARELARSLGAREPQVVNGPEILDKFVGEAEAKVRELFAPAEAEWDAA---GDASA---LHVIILDEMDAIAKKRGSASGDASGVRDSVVNQLLSKMDGVVEAGNVLVVGLTNRPELLDEALLRPGRLEV 476
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A7S2EHK2_TRICV (Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHK2_TRICV) HSP 1 Score: 204 bits (518), Expect = 1.320e-57 Identity = 106/180 (58.89%), Postives = 136/180 (75.56%), Query Frame = 1
Query: 772 DVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
+VGGLD Q++ I RRVL++R+ P E + LG+ HVRG+LL GPPGCGKTLLAREL+ LG R PK+V+GPEILDK++GEAERKVR LF AE+++ E L+++ DE+DA+ R RGS+ DTSGVRDSV+ L+KMDG+ + NVLV+G+TNR ELLD ALLRPGR+EV
Sbjct: 85 EVGGLDKQIDSIARRVLASRADP-EAAERLGISHVRGILLSGPPGCGKTLLARELADVLGVRKPKIVNGPEILDKYIGEAERKVRELFAPAEVEYAASGDKSE------LHIIIMDEMDAIARKRGSVGSDTSGVRDSVVNQLLAKMDGVREVPNVLVIGLTNRPELLDPALLRPGRLEV 257
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: A0A7S2M5J1_9STRA (Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5J1_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.850e-57 Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 772 DVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
+VGGLD QL+DI RRVL++R+ P R+ LGV HVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAER+VR LF+ AE ++E ++G+ A L+++ DE+DA+ R RGS+S DT+GVRDSV+ L+K+DG+ + NVL+VG+TNR ELLD ALLRPGR+EV
Sbjct: 367 NVGGLDKQLDDIARRVLASRANPAAARK-LGVSHVRGILLSGPPGCGKTLLARELSRLLGAREPQIVNGPEILDKFIGEAERRVRELFIPAEREYE---EVGDSSA---LHIIILDEMDAIARKRGSMSSDTTGVRDSVVNQLLAKIDGVKEVPNVLIVGLTNRPELLDPALLRPGRLEV 539
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Match: F0XWG9_AURAN (Vesicle-fusing ATPase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWG9_AURAN) HSP 1 Score: 194 bits (494), Expect = 3.270e-57 Identity = 105/167 (62.87%), Postives = 133/167 (79.64%), Query Frame = 1
Query: 811 RRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLVCFDEIDALCRSRGSLSGDTSGVRDSVI---LSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEV 1302
RRVL++R+ P R+ LGV HVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK+VGEAERKVR LF AE ++ Q+G+ A L+++ FDE+DA+ R RGSL+GDT+GVRD V+ L+K+DG+V NVLVVG TNR EL+DEALLRPGR+E+
Sbjct: 1 RRVLASRADPEGARR-LGVSHVRGVLLSGPPGCGKTLLARELARELGARAPQIVNGPEILDKFVGEAERKVRDLFQPAEDEYR---QVGDASA---LHVIVFDEMDAIARRRGSLTGDTTGVRDGVVNQLLAKLDGVVAAPNVLVVGCTNRPELIDEALLRPGRLEI 160 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13567.2653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13567.2653.1 >prot_E-fasciculatus_F_contig13567.2653.1 ID=prot_E-fasciculatus_F_contig13567.2653.1|Name=mRNA_E-fasciculatus_F_contig13567.2653.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=434bp LNKGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVback to top mRNA from alignment at E-fasciculatus_F_contig13567:83..3068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13567.2653.1 ID=mRNA_E-fasciculatus_F_contig13567.2653.1|Name=mRNA_E-fasciculatus_F_contig13567.2653.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2986bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13567:83..3068+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13567:83..3068+ >mRNA_E-fasciculatus_F_contig13567.2653.1 ID=mRNA_E-fasciculatus_F_contig13567.2653.1|Name=mRNA_E-fasciculatus_F_contig13567.2653.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2604bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13567:83..3068+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |