mRNA_E-fasciculatus_F_contig13560.2650.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13560.2650.1
Unique NamemRNA_E-fasciculatus_F_contig13560.2650.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: D7G475_ECTSI (Deubiquitinating enzyme A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G475_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 3.890e-151
Identity = 245/284 (86.27%), Postives = 248/284 (87.32%), Query Frame = 1 
Query:   43 APINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSTHHVFPGESPAFLKGGRGTHGSFGEGFGESDLRATEEELEQAAITASLADFRGTTGXXXXXXXXXXXXXXFSVPRRGGRGSGGRFIGRGAASRVSXXXXXXXXXXXXAWAS-AGSPAGRVERGGWMSSGGGAAEGEGNGKSRKRRRPGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARVIAAHDLVGESVEDMLVLLTSDAFQPPENGDRR 891
            APINIFHGGYRSGNAPIRVSYHGGNHYNA+VDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSS HHVFPG SP F KGGRG HGSFGEGFGESD+RATEEELEQAAITASL+DFRGTT               FSVPRRGGRGSGGRFIGRGAASRVS    XXXXX   AWAS AGSPAGRVERGGWMSSGG   EG     SRKRRRPGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARVIAAHDLVGESVEDMLVLLTSDAFQPPENGDRR
Sbjct:   68 APINIFHGGYRSGNAPIRVSYHGGNHYNAIVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHHVFPGASPTFFKGGRGMHGSFGEGFGESDVRATEEELEQAAITASLSDFRGTTSGGGSSNNGKSDGAAFSVPRRGGRGSGGRFIGRGAASRVSGGREXXXXXGAAAWASGAGSPAGRVERGGWMSSGGXXXEGXXXXXSRKRRRPGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARVIAAHDLVGESVEDMLVLLTSDAFQPPENGDRR 351
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A6H5JLC1_9PHAE (Deubiquitinating enzyme A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC1_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 3.340e-121
Identity = 231/284 (81.34%), Postives = 233/284 (82.04%), Query Frame = 1 
Query:   43 APINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSTHHVFPGESPAFLKGGRGTHGSFGEGFGESDLRATEEELEQAAITASLADFRGTTGXXXXXXXXXXXXXXFSVPRRGGRGSGGRFIGRGAASRVSXXXXXXXXXXXXAWASAGSPAGRVERGGWMSSGGGAAEGEGNGKSRKRRR-PGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARVIAAHDLVGESVEDMLVLLTSDAFQPPENGDRR 891
            APINIFHGGYRSGNAPIRVSYHGGNHYNA+VDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSS HHVF GESP F KGGRGTHGSFGEGFGESDLRATEEELEQAAITASLADFRGTTGXXXXXXXX      FSVPRRGGRGSGGRFIGRGAASRVS XXXXXXXXXXX                                       PGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARV+AAHDLVGESVEDMLVLLTSD FQPPENGDRR
Sbjct:  265 APINIFHGGYRSGNAPIRVSYHGGNHYNAIVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHHVFSGESPTFFKGGRGTHGSFGEGFGESDLRATEEELEQAAITASLADFRGTTGXXXXXXXXKSDGAAFSVPRRGGRGSGGRFIGRGAASRVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARVVAAHDLVGESVEDMLVLLTSDGFQPPENGDRR 548
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A1E7F9N9_9STRA (Deubiquitinating enzyme A (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9N9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.310e-14
Identity = 50/130 (38.46%), Postives = 73/130 (56.15%), Query Frame = 1 
Query:   40 AAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSTHHVF---------PGESPAFLKGGR--GTHGSFGEGFGESDLRATEEELEQAAITASLADF 396
            ++P+NIFH  Y++G+ PIR+SYH GNHYNAV+DP   + G GLG+PGL    A+K  + +A+AES ++   +            E    +K  +    H +       SD+ AT  ELEQAA+  SL  +
Sbjct:  107 SSPLNIFHAEYKNGDVPIRLSYHDGNHYNAVIDPLMPTAGLGLGLPGLKPGLADKMQMAKAVAESDAAADQMELQQVMKTSEDDEIQRAIKESKLSAEHKNSNAALSLSDMDATYFELEQAALERSLQSY 236
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A7S2K5T8_9STRA (Deubiquitinating enzyme A n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5T8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.630e-14
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 1 
Query:   34 GTAAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSTHHV 255
            G  APINIFH  Y++ +AP+R+SYH GNHYNA++DP   + G GLG+PGL    A+K  +K+ALAES S  +HV
Sbjct:  251 GGKAPINIFHAEYKTADAPVRLSYHDGNHYNAIIDPYMPTAGLGLGLPGLKPGLADKMQMKKALAESDS--NHV 322
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A7R9WK04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WK04_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.900e-14
Identity = 52/140 (37.14%), Postives = 73/140 (52.14%), Query Frame = 1 
Query:   40 AAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGL------------SKEAAE---------KESLKRALAESCSSTHHVFPGESPAFLKGGRGTHGSFGEGFGESDLRATEEELEQAAITASLADF 396
            A PINIFH  Y++ +APIR+SYH GNHYNAVVDP   + G GLG+PGL            +KE +E         ++ + RAL ES +S   ++  +    L                SDL AT+ ELE+A + +S+  +
Sbjct:   58 AKPINIFHAEYKTSDAPIRLSYHDGNHYNAVVDPLLPTAGLGLGLPGLEPGLADRLQLEKAKEESEIELAAAEASRDDMDRALQESRASVERMYDKQKALAL----------------SDLEATDFELERAVLESSMESY 181
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A7S4IP16_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IP16_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.720e-14
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 1 
Query:   40 AAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAES-----CSSTHHVFPGESPAFLKGGRGTHGSF----GEGFGESDLRATEEELEQAAITASLADFR 399
            A PINIFH  Y++ +APIR+SYH GNHYNAVVDP   + G GLG+PGL    A++  L+RA  ES      +    +   E    L+  R +  +      +    SD+ AT+ ELE+A + +S+  +R
Sbjct:   29 AKPINIFHAEYKTADAPIRLSYHDGNHYNAVVDPLLPTAGLGLGLPGLEPGLADRLQLERAKEESQIELDAAEASRI---EMSRALEESRASEVARMYDKQKALAMSDMEATDYELERAVLESSMESYR 154
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A7S1ZCV0_TRICV (Deubiquitinating enzyme A n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZCV0_TRICV)

HSP 1 Score: 85.1 bits (209), Expect = 8.670e-14
Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 1 
Query:   46 PINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGL------------SKEAAEKESLKR---------ALAESCSSTHHVFPGESPAFLKGGRGTHGSFGEGFGESDLRATEEELEQAAITASLADFR 399
            P+NIFH  Y++ + PIR+SYH GNHYNAVVDP + + G GLG+PGL            +KE +E E + R         A+ ES +ST  +   ++ A                  SDL AT+ ELEQA + +SL  +R
Sbjct:  261 PLNIFHAEYKTSDVPIRLSYHDGNHYNAVVDPLKPTAGLGLGLPGLDPGLADRLQMEKAKEESEAEQIARETHRADVVRAMKESAASTDRMLKQKAMAL-----------------SDLEATDLELEQAVLQSSLESYR 382
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A7S2E518_9STRA (Deubiquitinating enzyme A (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E518_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.480e-13
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 1 
Query:   31 IGTAAPINIFHGGYRSG--NAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSK-EAAEKESLKRALAESCS 240
            +  A P+NIF G Y+ G  NAPIR+SYH GNHYNA+VDPE  +VG GLG+PGL   +  EK  L+ AL ES S
Sbjct:  149 VAAAKPMNIFQGTYKHGGENAPIRLSYHNGNHYNAIVDPEAPAVGVGLGLPGLVPGDVYEKRQLETALQESYS 221
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: A0A7S4MQ37_9STRA (Deubiquitinating enzyme A n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQ37_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.220e-13
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 1 
Query:   40 AAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAES-----CSSTHHVFPGESPAFLKGGRGTHGSF----GEGFGESDLRATEEELEQAAITASLADFR 399
            A PINIFH  Y++ +APIR+SYH GNHYNAVVDP   + G GLG+PGL    A++  L+RA  ES      +    +   E    L+  R +  +      +    SD+ AT+ ELE+A + +S+  +R
Sbjct:  469 AKPINIFHAEYKTADAPIRLSYHDGNHYNAVVDPLLPTAGLGLGLPGLEPGLADRLQLERAKEESQIELDAAEASRI---EMSRALEESRASEVARMYDKQKALAMSDMEATDYELERAVLESSMESYR 594
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BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Match: B7G121_PHATC (Deubiquitinating enzyme A n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G121_PHATC)

HSP 1 Score: 80.5 bits (197), Expect = 2.950e-12
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:   40 AAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 234
            A P+NIFH  Y++G+ PIR+SYH GNHYNAV+DP   + G GLG+PGL    A+K  + +A+AES
Sbjct:  307 AKPLNIFHAEYKTGDTPIRLSYHDGNHYNAVIDPLVPTAGLGLGLPGLQPGLADKMQVAKAMAES 371
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13560.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G475_ECTSI3.890e-15186.27Deubiquitinating enzyme A n=1 Tax=Ectocarpus silic... [more]
A0A6H5JLC1_9PHAE3.340e-12181.34Deubiquitinating enzyme A n=1 Tax=Ectocarpus sp. C... [more]
A0A1E7F9N9_9STRA2.310e-1438.46Deubiquitinating enzyme A (Fragment) n=1 Tax=Fragi... [more]
A0A7S2K5T8_9STRA4.630e-1455.41Deubiquitinating enzyme A n=1 Tax=Leptocylindrus d... [more]
A0A7R9WK04_9STRA6.900e-1437.14Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4IP16_9STRA7.720e-1439.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1ZCV0_TRICV8.670e-1438.13Deubiquitinating enzyme A n=1 Tax=Trieres chinensi... [more]
A0A7S2E518_9STRA3.480e-1357.53Deubiquitinating enzyme A (Fragment) n=1 Tax=Dicty... [more]
A0A7S4MQ37_9STRA7.220e-1339.53Deubiquitinating enzyme A n=1 Tax=Odontella aurita... [more]
B7G121_PHATC2.950e-1255.38Deubiquitinating enzyme A n=2 Tax=Phaeodactylum tr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13560contigE-fasciculatus_F_contig13560:2..2846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score455.3
Seed ortholog evalue2.2e-125
Seed eggNOG ortholog2880.D7G475
Preferred nameOTUD5
KEGG koko:K12611,ko:K12655
KEGG Pathwayko03018,ko04622,map03018,map04622
KEGG ModuleM00395
GOsGO:0000003,GO:0001775,GO:0001816,GO:0001817,GO:0001818,GO:0002237,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002286,GO:0002287,GO:0002292,GO:0002293,GO:0002294,GO:0002295,GO:0002360,GO:0002363,GO:0002366,GO:0002376,GO:0002460,GO:0002520,GO:0002521,GO:0002682,GO:0002790,GO:0002791,GO:0002792,GO:0002819,GO:0002822,GO:0003006,GO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006955,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009306,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009987,GO:0010033,GO:0010498,GO:0015031,GO:0015833,GO:0016579,GO:0016787,GO:0019538,GO:0019783,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030097,GO:0030098,GO:0030154,GO:0030163,GO:0030217,GO:0031647,GO:0032479,GO:0032480,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032625,GO:0032638,GO:0032660,GO:0032700,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0033993,GO:0035710,GO:0036037,GO:0036211,GO:0036459,GO:0042093,GO:0042110,GO:0042221,GO:0042886,GO:0043161,GO:0043170,GO:0043207,GO:0043367,GO:0043368,GO:0043369,GO:0043373,GO:0043374,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045058,GO:0045165,GO:0045184,GO:0045321,GO:0046631,GO:0046632,GO:0046649,GO:0046903,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050663,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050776,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051241,GO:0051603,GO:0051704,GO:0051707,GO:0061578,GO:0065007,GO:0065008,GO:0070011,GO:0070201,GO:0070536,GO:0070646,GO:0070647,GO:0071108,GO:0071702,GO:0071704,GO:0071705,GO:0072538,GO:0072539,GO:0072540,GO:0072607,GO:0072619,GO:0090087,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1903530,GO:1903531,GO:1904950,GO:1905076,GO:1905077,GO:1990380,GO:2000316
EggNOG free text desc.thiol-dependent ubiquitin-specific protease activity
EggNOG OGsKOG2605@1,KOG2605@2759
EC3.4.19.12
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03019,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size1720
Cds size894
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13560.2650.1prot_E-fasciculatus_F_contig13560.2650.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13560 2..2020 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927853.2710207-CDS-E-fasciculatus_F_contig13560:1..1631622927853.2710207-CDS-E-fasciculatus_F_contig13560:1..163Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 2..163 +
1695995723.933375-CDS-E-fasciculatus_F_contig13560:1..1631695995723.933375-CDS-E-fasciculatus_F_contig13560:1..163Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 2..163 +
1622927853.2874134-CDS-E-fasciculatus_F_contig13560:517..7241622927853.2874134-CDS-E-fasciculatus_F_contig13560:517..724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 518..724 +
1695995723.9508765-CDS-E-fasciculatus_F_contig13560:517..7241695995723.9508765-CDS-E-fasciculatus_F_contig13560:517..724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 518..724 +
1622927853.3414302-CDS-E-fasciculatus_F_contig13560:1161..14971622927853.3414302-CDS-E-fasciculatus_F_contig13560:1161..1497Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 1162..1497 +
1695995723.962404-CDS-E-fasciculatus_F_contig13560:1161..14971695995723.962404-CDS-E-fasciculatus_F_contig13560:1161..1497Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 1162..1497 +
1622927853.3678622-CDS-E-fasciculatus_F_contig13560:1831..20201622927853.3678622-CDS-E-fasciculatus_F_contig13560:1831..2020Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 1832..2020 +
1695995723.976872-CDS-E-fasciculatus_F_contig13560:1831..20201695995723.976872-CDS-E-fasciculatus_F_contig13560:1831..2020Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13560 1832..2020 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927853.3867216-UTR-E-fasciculatus_F_contig13560:2020..28461622927853.3867216-UTR-E-fasciculatus_F_contig13560:2020..2846Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13560 2021..2846 +
1695995723.9858763-UTR-E-fasciculatus_F_contig13560:2020..28461695995723.9858763-UTR-E-fasciculatus_F_contig13560:2020..2846Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13560 2021..2846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13560.2650.1

>prot_E-fasciculatus_F_contig13560.2650.1 ID=prot_E-fasciculatus_F_contig13560.2650.1|Name=mRNA_E-fasciculatus_F_contig13560.2650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=298bp
YLFSFRCPFIIGTAAPINIFHGGYRSGNAPIRVSYHGGNHYNAVVDPEEA
SVGQGLGIPGLSKEAAEKESLKRALAESCSSTHHVFPGESPAFLKGGRGT
HGSFGEGFGESDLRATEEELEQAAITASLADFRGTTGGGGSSNNGKSGGA
AFSVPRRGGRGSGGRFIGRGAASRVSGGREERRGGGAAAWASAGSPAGRV
ERGGWMSSGGGAAEGEGNGKSRKRRRPGSPPGEGSRKASPNSADGSTSSA
VREMVWSYGFPLARVIAAHDLVGESVEDMLVLLTSDAFQPPENGDRR*
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mRNA from alignment at E-fasciculatus_F_contig13560:2..2846+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13560.2650.1 ID=mRNA_E-fasciculatus_F_contig13560.2650.1|Name=mRNA_E-fasciculatus_F_contig13560.2650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2845bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13560:2..2846+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TATTTGTTTTCCTTTCGCTGCCCCTTCATTATTGGTACAGCTGCTCCAAT
CAATATCTTCCACGGAGGATACCGTTCGGGCAATGCTCCCATCCGAGTGA
GCTACCACGGAGGCAACCACTACAATGCAGTCGTAGACCCTGAGGAGGCC
AGCGTTGGGCAGGTACGACACGACCACTACAGTAGATCGAACTTGTTCGC
TTTTGTTGTGTTCTGCAGCAGCGTGTAACGTGGCTAGGTCTGTTGACTGG
CAAGTTTCAAGCTCGCCGTCGCCACAAGCACCTTGTAGAGGCCGCATTTT
CGCGACGGGCATGCCCAACACAGACCCAACGATCCTTCGTGAAGTTGTGC
AACAGAGTAATATCGGGAGTCGGTTTTCCGATACTGCGCTGGCATGATTT
CGAAGCATCGTGCCACCGGTGACCTCCTGTTACATGAAAAACCGCAAGAC
CCCCTTCATACCCAACTTGACACCAAACCACCCCCTATACATACCTTTGG
AACGTTCTGTTTACAGGGCTTAGGCATTCCTGGCCTGTCGAAAGAGGCTG
CGGAGAAGGAGTCTCTCAAGCGCGCGTTGGCAGAATCCTGCTCGTCCACC
CATCATGTTTTTCCTGGCGAATCGCCGGCGTTCTTAAAAGGAGGCCGGGG
AACGCATGGTTCATTTGGGGAGGGCTTCGGGGAGTCTGACCTGAGAGCTA
CCGAAGAAGAACTGGAGCAGGCGGTGAGAGTGAGAGTGGGCAGCTCAGGT
GTTGTGTGTTTATGAGTGAGCGATTTCGCTCGATGGGGCGCGCATGTTGA
TGCATGTCTCGGTTGTTCTTGTTTTGTTTTCATGCCGATTATTGACGATT
GTATGTTTTGCTCCACCCCTGTCCAGAGAACAACGTTGCAATACAGTGGT
AGACATGGCCATTGCATATTTTTCGTCATTGGTGGGAATGGGCAACTACT
GCTGTATGCCTTCTCCTCGTCCTGCACTGCCAGTGCGCGGCCCTATCGCA
CTAGTTTTGGACAGCAGTTGACAGGACGACCTCTCCCGTTGACACTGCTG
TACTTGCTCAAGTTTTGTTCTTGGAAGCATGCCATTGATAAGTACCGGAC
TGGTGTATGTATGTGTATTCGTTCCCGTGACCGACCGCTCTTCTCGCCTT
CGTGCAACAGGCCATAACGGCTTCTCTTGCCGACTTTCGCGGCACAACCG
GCGGCGGCGGGAGCAGCAACAACGGCAAGAGCGGCGGTGCCGCCTTTTCC
GTCCCTCGGCGGGGAGGCAGGGGTAGCGGTGGGAGATTTATTGGACGCGG
AGCAGCCAGCAGGGTTTCCGGAGGTCGCGAAGAACGGCGGGGGGGGGGTG
CCGCTGCATGGGCGAGTGCTGGGTCGCCGGCGGGTAGGGTGGAGCGTGGG
GGGTGGATGAGCAGTGGCGGAGGAGCAGCAGAAGGAGAAGGCAACGGAAA
GTCTCGAAAGCGCCGAAGGCCTGGAAGCCCGCCTGGGGAAGGTTCGGTAA
GTGTTGGGTACCCCCCTGGGTTGATATATTTACATATTGAGCTCTTGCTT
GCATATGGAAGACTTTATCCGCTGTATATAGAAAAGTCAAGGAATGTTGA
CATCGATGCTCTTTTCCAAGGAATGATGGGCGTTGTCAAAAAGTGGGTGT
GGCCTCATTTATGCATGCATACAATGTAGTGAAAGAAAGGTTTGATACTG
TTAGGAATTCCTGGCGTCTCCACACCCTCGGTTCATTTGCAAACACGCCG
GTGTCAGTTTCAATAAACTTGTTCTCTTGAATTCGACCACCGCTCGCTCC
CCTCCTTTGCTCTTCCGAACGATTCCTCAGAGAAAAGCATCACCGAACTC
GGCAGATGGCTCTACAAGTAGCGCCGTGAGAGAGATGGTATGGTCCTACG
GCTTCCCACTGGCAAGAGTTATTGCAGCCCATGACCTCGTGGGCGAGAGC
GTGGAAGACATGCTTGTTTTGCTCACATCGGATGCTTTTCAGCCACCAGA
AAACGGCGACCGGCGATAGATGACTACCTATTTCGCCCACTCATGTTTCG
CGCGGAGGAAGTCGAATCATCAGGAATGTACACCGTGGAGACGCACACCA
GTAGAATATACGAGTGGTGAACATTTTGTTGATAAGTGCGGGACGAAATT
ACTGCTTTCCATAGGTTTAGAGCTGCTGTTGTTAATGTTGTGTGGTTCTC
GTGTGATGGGGTGATAGTTGCGATGGTGCACATTTGTTTGTTTGGAACGG
GGCGAGACACTACTCTCGGGAAAGGTTGGCGCTCGCTTGACGGGTTACGA
GTCTGTCGAGTGTCTGCCCATCTTGCGATCGTGCTATGTAGTATTCGCTT
TGCCAAGGTTACGTGTTCCCTGTTTTCCATGATTGTATATACGCCATGGG
GCTAAAATATGTTGCTTGCTAGGTCCGACTTCGTTGGAGGGAGGGCTGGT
CCGTTCATCCCGAAACACGCGCCGGGTTTTTGAACCCATCTAAGCGCAAC
TGCTGTAGCGGAGCAACTGTTTCCTCCTGTGGTGTTTCGCCGTCGAGATG
ACTACAAGGGCACCAGAGAAACCACGTGGCTTCACCTAGCCTTGAAGCTG
CGACGTCGTGCGGCGCACCCCACGTATTATGACGGCCCCTCAGGGTGTGA
CTACTGCTGTTGCGATTGCAACCGATTGCTTGCTTGCAGACATATGTATC
GAAAAAAACGCCATGTCAGTCTCTTTCATTACTGAGTATTCTTGCCATTG
AAGTTGTGTGTGTGCCATCGCGATTCGGCGCACTACAAACATGAGTACTT
CCAAGCCGGGGCCAGATTTCAAGGAGACAAGGAAAAAGAGTCGGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13560:2..2846+

>mRNA_E-fasciculatus_F_contig13560.2650.1 ID=mRNA_E-fasciculatus_F_contig13560.2650.1|Name=mRNA_E-fasciculatus_F_contig13560.2650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13560:2..2846+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TATTTGTTTTCCTTTCGCTGCCCCTTCATTATTGGTACAGCTGCTCCAAT
CAATATCTTCCACGGAGGATACCGTTCGGGCAATGCTCCCATCCGAGTGA
GCTACCACGGAGGCAACCACTACAATGCAGTCGTAGACCCTGAGGAGGCC
AGCGTTGGGCAGTATTTGTTTTCCTTTCGCTGCCCCTTCATTATTGGTAC
AGCTGCTCCAATCAATATCTTCCACGGAGGATACCGTTCGGGCAATGCTC
CCATCCGAGTGAGCTACCACGGAGGCAACCACTACAATGCAGTCGTAGAC
CCTGAGGAGGCCAGCGTTGGGCAGGGCTTAGGCATTCCTGGCCTGTCGAA
AGAGGCTGCGGAGAAGGAGTCTCTCAAGCGCGCGTTGGCAGAATCCTGCT
CGTCCACCCATCATGTTTTTCCTGGCGAATCGCCGGCGTTCTTAAAAGGA
GGCCGGGGAACGCATGGTTCATTTGGGGAGGGCTTCGGGGAGTCTGACCT
GAGAGCTACCGAAGAAGAACTGGAGCAGGCGGGCTTAGGCATTCCTGGCC
TGTCGAAAGAGGCTGCGGAGAAGGAGTCTCTCAAGCGCGCGTTGGCAGAA
TCCTGCTCGTCCACCCATCATGTTTTTCCTGGCGAATCGCCGGCGTTCTT
AAAAGGAGGCCGGGGAACGCATGGTTCATTTGGGGAGGGCTTCGGGGAGT
CTGACCTGAGAGCTACCGAAGAAGAACTGGAGCAGGCGGCCATAACGGCT
TCTCTTGCCGACTTTCGCGGCACAACCGGCGGCGGCGGGAGCAGCAACAA
CGGCAAGAGCGGCGGTGCCGCCTTTTCCGTCCCTCGGCGGGGAGGCAGGG
GTAGCGGTGGGAGATTTATTGGACGCGGAGCAGCCAGCAGGGTTTCCGGA
GGTCGCGAAGAACGGCGGGGGGGGGGTGCCGCTGCATGGGCGAGTGCTGG
GTCGCCGGCGGGTAGGGTGGAGCGTGGGGGGTGGATGAGCAGTGGCGGAG
GAGCAGCAGAAGGAGAAGGCAACGGAAAGTCTCGAAAGCGCCGAAGGCCT
GGAAGCCCGCCTGGGGAAGGTTCGGCCATAACGGCTTCTCTTGCCGACTT
TCGCGGCACAACCGGCGGCGGCGGGAGCAGCAACAACGGCAAGAGCGGCG
GTGCCGCCTTTTCCGTCCCTCGGCGGGGAGGCAGGGGTAGCGGTGGGAGA
TTTATTGGACGCGGAGCAGCCAGCAGGGTTTCCGGAGGTCGCGAAGAACG
GCGGGGGGGGGGTGCCGCTGCATGGGCGAGTGCTGGGTCGCCGGCGGGTA
GGGTGGAGCGTGGGGGGTGGATGAGCAGTGGCGGAGGAGCAGCAGAAGGA
GAAGGCAACGGAAAGTCTCGAAAGCGCCGAAGGCCTGGAAGCCCGCCTGG
GGAAGGTTCGAGAAAAGCATCACCGAACTCGGCAGATGGCTCTACAAGTA
GCGCCGTGAGAGAGATGGTATGGTCCTACGGCTTCCCACTGGCAAGAGTT
ATTGCAGCCCATGACCTCGTGGGCGAGAGCGTGGAAGACATGCTTGTTTT
GCTCACATCGGATGCTTTTCAGCCACCAGAAAACGGCGACCGGCGATAGA
GAAAAGCATCACCGAACTCGGCAGATGGCTCTACAAGTAGCGCCGTGAGA
GAGATGGTATGGTCCTACGGCTTCCCACTGGCAAGAGTTATTGCAGCCCA
TGACCTCGTGGGCGAGAGCGTGGAAGACATGCTTGTTTTGCTCACATCGG
ATGCTTTTCAGCCACCAGAAAACGGCGACCGGCGATAG
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