mRNA_E-fasciculatus_F_contig13552.2642.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13552.2642.1
Unique NamemRNA_E-fasciculatus_F_contig13552.2642.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 3.770e-122
Identity = 191/253 (75.49%), Postives = 218/253 (86.17%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAK------IADFGTSRWAQNTERSTGLATYTTNP-PSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            P+DHV IT E+LG+GGFG VYLADYNGHNAAAKVQ+I HG G+    D  L+ P++ + +A+REKVQRKAFLRELDAMIRLR+PH VNVYGAITSLPDRL+LV+ELL GGDLRTMLK+SEQ LPE++ RQII+D+C GMAFLHSK+TVHGDLKSAN+LLD RGRAK      I DFGTSRW QNTERSTGLATYTTNP PS HISFAWTAPEVL    TSKASD+YSFG+V WEVL+RQ+PWAD+A+PRDIYL
Sbjct:  750 PDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGR---RDDVLNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKETTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYL 999
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BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 5.040e-121
Identity = 196/247 (79.35%), Postives = 203/247 (82.19%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNP-PSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            PE+HVSIT EVLGKGGFGVVYLADYNGHNAAAK                               K +RKAFLRELDAM+RLRNPH VNVYGAITSLPDRLVLVMELL GGDLR MLK+SEQ LPEDKCRQIIQDVC GMAFLHSKATVHGDLKSANVLLDGRGRAKI DFGTSRWAQNTERSTGLATYTTNP PSAHISFAWTAPEVL S +TS ASD+YSFGMVAWEVLTRQ PWAD+ARPRDIYL
Sbjct:  834 PEEHVSITTEVLGKGGFGVVYLADYNGHNAAAK-------------------------------KAERKAFLRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSAHISFAWTAPEVLESKETSTASDVYSFGMVAWEVLTRQTPWADQARPRDIYL 1049
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BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 2.180e-118
Identity = 190/247 (76.92%), Postives = 200/247 (80.97%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNP-PSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            PEDHVSITNE+LGKGGFGVVYLADYNGHNAAAK                               K +RKAFLREL+AMIRLRNPH VNVYGAITS P+RLVLVMELL GGDLR MLK+SEQ LPEDKCRQII DVC GMAFLHSKATVHGDLKSANVLLDGRGRAKI DFGTSRWAQNTERSTGLATYTTNP PS HIS AWTAPEVL + +TSKASD+YSFGMVAWEVLTRQ PWAD+ RPRDI+L
Sbjct:  672 PEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK-------------------------------KAERKAFLRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSTHISLAWTAPEVLEAKETSKASDVYSFGMVAWEVLTRQTPWADQTRPRDIFL 887
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D7FLJ2_ECTSI (TKL family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.180e-117
Identity = 191/247 (77.33%), Postives = 202/247 (81.78%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNP-PSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            PEDHVSITNE+LGKGGFGVVYLADYNGHNAAAK                               K +RKAFLRELDAMIRLR+PH VNVYGAITSLPD LV+VMELL GGDLR MLK+SEQ LPED CRQIIQDVC GM FLHSK+TVHGDLKSANVLLDGRGRAKI DFGTSRWAQNT+RSTGLATYTTNP PSAHISFAWTAPEVL S +TSKASD+YSFGMVAWEVLTR+ PWAD+ARPRDIYL
Sbjct:  890 PEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK-------------------------------KAERKAFLRELDAMIRLRSPHTVNVYGAITSLPDGLVMVMELLAGGDLRAMLKNSEQPLPEDMCRQIIQDVCAGMTFLHSKSTVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTDRSTGLATYTTNPGPSAHISFAWTAPEVLESQETSKASDVYSFGMVAWEVLTRRTPWADQARPRDIYL 1105
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BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 2.200e-111
Identity = 181/247 (73.28%), Postives = 201/247 (81.38%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNP-PSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            P+DHV IT E+LG+GGFG VYLADYNGHNAAAKV       GK                     K+QRKAFLRELDAMIRLR+PH VNVYGAITSLPDRL+LV+ELL GGDLRTMLK+SEQ LPE++ RQII+D+C GMAFLHSK+TVHGDLKSAN+LLD RGRAKI DFGTSRW QNTERSTGLATYTTNP PS HISFAWTAPEVL    TSKASD+YSFG+V WEVL+RQ+PWAD+A+PRDIYL
Sbjct:  893 PDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKV-------GK---------------------KIQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYL 1111
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D7G7X9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 8.430e-105
Identity = 180/247 (72.87%), Postives = 192/247 (77.73%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNP-PSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            PEDHVSIT+E+LGKGGFGVVYLADYNGHNAAAK                               K +RKAFLRELDAMIRLR+PHIVN+YGAITSLPDRL+LVMELL GGDLR MLK+SEQ LP+DKCRQIIQDVC GMAFLH KATVHGDLKSANVLLD RGRAKI DFGTSRWA   ERS    T  TNP PS HISFAWTAPEVL + +TSKA D+YSFGMVAWEVLTRQ PW D+ARPRDIYL
Sbjct: 1117 PEDHVSITDEMLGKGGFGVVYLADYNGHNAAAK-------------------------------KAERKAFLRELDAMIRLRSPHIVNIYGAITSLPDRLILVMELLAGGDLRAMLKNSEQPLPKDKCRQIIQDVCVGMAFLHGKATVHGDLKSANVLLDDRGRAKIGDFGTSRWA---ERSAETVTNNTNPGPSTHISFAWTAPEVLETKETSKAGDVYSFGMVAWEVLTRQTPW-DQARPRDIYL 1328
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BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.450e-102
Identity = 168/246 (68.29%), Postives = 201/246 (81.71%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNAL-REKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTT-NPPSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDI 732
            PE+HV+ITNEVLG+GGFG VYLADYNG NAAAKV  I   LG L END  L  P    SN   RE  QR+AFLRELDAMIRLR+PH VNVYGA+TSLPDR+VLVMELL GGDLRT+L++ +Q LPE++ R+II D+C GMAFLHSK TVHGDLKSANVLLDG GRAKI DFGTSRW+Q+T  STGLATYTT + P   +S AW+APEVL S  +++ASD+YSFG+V WEV++ ++PWA+++RPR+I
Sbjct:  656 PEEHVTITNEVLGRGGFGEVYLADYNGRNAAAKVLLIARDLGTLSENDA-LESPLAGRSNTTKREDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTN-STGLATYTTRSSPGTQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREI 899
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 6.310e-102
Identity = 156/245 (63.67%), Postives = 194/245 (79.18%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNPP-SAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDI 732
            PE+H++IT+++LG+GGFG V+LADYNG NAA KV H+ H  G L E         +  S   RE+ QR+AFLREL+AMIRL++PH VNVYGA+T LPDRL+LVMELL GGDLRT+L S +Q  PE++ R+II DVC+GMAFLHSK TVHGDLKSANVLLDG GRAKI DFGTSRWAQ+T  STGLATYTT    S  +S AW+APEVL +  ++  SD+YSFG+VAWEV+++++PWAD+ RPRD+
Sbjct:   93 PEEHLTITDDLLGRGGFGEVFLADYNGRNAACKVVHVAHDQGALREIYELGQSVASSHSKTQREQNQRRAFLRELEAMIRLQSPHTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQPFPEEQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTN-STGLATYTTRSSRSTPMSLAWSAPEVLEAEGSTYESDVYSFGIVAWEVISKKMPWADKIRPRDV 336
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: D7FLN5_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.450e-98
Identity = 160/247 (64.78%), Postives = 184/247 (74.49%), Query Frame = 1 
Query:    1 PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNPP-SAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            PEDHV IT+EVLGKGGFG V++ADYNG NAAAKVQH+ HG G+LGE+D+ L+     ES+ L+ + QRKAFL ELDAM+RLR+PH VNVYGAITSL +R VLVMELL GGDLR+MLK +E  LPE +CRQII D+C GMAFLH                      KI DFGTSRWAQNTE STGLATYTT      HISFAWTAPEVL +   S ASD+YSFG+V WE+LTRQIPWA++A P DIYL
Sbjct:  289 PEDHVLITDEVLGKGGFGEVFIADYNGRNAAAKVQHVAHGFGRLGEDDL-LNGASKGESHTLQLQKQRKAFLHELDAMVRLRSPHTVNVYGAITSLLNRPVLVMELLAGGDLRSMLKRAEPPLPEAQCRQIIGDICAGMAFLH---------------------CKIGDFGTSRWAQNTENSTGLATYTTKTGHGTHISFAWTAPEVLKTKAVSNASDVYSFGVVVWEILTRQIPWAEQALPTDIYL 513
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 1.270e-96
Identity = 162/247 (65.59%), Postives = 195/247 (78.95%), Query Frame = 1 
Query:    1 PEDHVSI-TNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIPLSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRLVLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHGDLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNPPSAHISFAWTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL 738
            PED V I ++E+LGKGGFG V+LA+YN  NAAAKV HI H LGK G  +  L      +SN  REK QRKAFLREL+AMIRLR+PH V VYGAITS PDRLVLVMELL GGDLR +LK+S+Q LPE++CR+II D+C GM FLHSK TVHGDLKSANVLLDG GRAKI DFGTSRW+ +T  STGLATYT    +  +S AW+APEVL ++ ++ ASD+YSFG+VAWEVL+R++PWA    PR++Y+
Sbjct:  914 PEDQVMIFSDELLGKGGFGEVFLAEYNRRNAAAKVLHIAHDLGKPGGQEDLLEARVDGQSNPEREKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTN-STGLATYTKAGQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYI 1159
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13552.2642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA37_9PHAE3.770e-12275.49Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LH32_ECTSI5.040e-12179.35Leucine rich repeat tyrosine kinase n=1 Tax=Ectoca... [more]
D7FRQ5_ECTSI2.180e-11876.92Similar to CG1848-PA, isoform A/ leucine rich repe... [more]
D7FLJ2_ECTSI1.180e-11777.33TKL family protein kinase protein kinase/ putative... [more]
D7FN19_ECTSI2.200e-11173.28Putative CTR1-like protein kinase/ leucine rich re... [more]
D7G7X9_ECTSI8.430e-10572.87Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LRE9_ECTSI1.450e-10268.29Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
D8LAU2_ECTSI6.310e-10263.67Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FLN5_ECTSI1.450e-9864.78Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5KY76_9PHAE1.270e-9665.59Protein kinase domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13552contigE-fasciculatus_F_contig13552:574..3092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.1
Seed ortholog evalue8.5e-91
Seed eggNOG ortholog2880.D7G7X9
Preferred nameRIPK4
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K14767,ko:K16175,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04390,ko04391,ko04530,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05165,ko05169,ko05203,map04064,map04210,map04217,map04390,map04391,map04530,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05165,map05169,map05203
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG0515@1,COG4886@1,KOG0192@2759,KOG0619@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size740
Cds size738
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927852.5743742-CDS-E-fasciculatus_F_contig13552:575..6981622927852.5743742-CDS-E-fasciculatus_F_contig13552:575..698Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 576..698 -
1695995723.5336547-CDS-E-fasciculatus_F_contig13552:575..6981695995723.5336547-CDS-E-fasciculatus_F_contig13552:575..698Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 576..698 -
1622927852.5855036-CDS-E-fasciculatus_F_contig13552:1896..20131622927852.5855036-CDS-E-fasciculatus_F_contig13552:1896..2013Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 1897..2013 -
1695995723.5458188-CDS-E-fasciculatus_F_contig13552:1896..20131695995723.5458188-CDS-E-fasciculatus_F_contig13552:1896..2013Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 1897..2013 -
1622927852.5958216-CDS-E-fasciculatus_F_contig13552:2388..27871622927852.5958216-CDS-E-fasciculatus_F_contig13552:2388..2787Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 2389..2787 -
1695995723.5556436-CDS-E-fasciculatus_F_contig13552:2388..27871695995723.5556436-CDS-E-fasciculatus_F_contig13552:2388..2787Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 2389..2787 -
1622927852.6126246-CDS-E-fasciculatus_F_contig13552:2993..30921622927852.6126246-CDS-E-fasciculatus_F_contig13552:2993..3092Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 2994..3092 -
1695995723.564508-CDS-E-fasciculatus_F_contig13552:2993..30921695995723.564508-CDS-E-fasciculatus_F_contig13552:2993..3092Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13552 2994..3092 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13552.2642.1prot_E-fasciculatus_F_contig13552.2642.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13552 576..3092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13552.2642.1

>prot_E-fasciculatus_F_contig13552.2642.1 ID=prot_E-fasciculatus_F_contig13552.2642.1|Name=mRNA_E-fasciculatus_F_contig13552.2642.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=246bp
PEDHVSITNEVLGKGGFGVVYLADYNGHNAAAKVQHITHGLGKLGENDIP
LSEPRTIESNALREKVQRKAFLRELDAMIRLRNPHIVNVYGAITSLPDRL
VLVMELLVGGDLRTMLKSSEQSLPEDKCRQIIQDVCTGMAFLHSKATVHG
DLKSANVLLDGRGRAKIADFGTSRWAQNTERSTGLATYTTNPPSAHISFA
WTAPEVLVSNKTSKASDIYSFGMVAWEVLTRQIPWADEARPRDIYL
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mRNA from alignment at E-fasciculatus_F_contig13552:574..3092-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13552.2642.1 ID=mRNA_E-fasciculatus_F_contig13552.2642.1|Name=mRNA_E-fasciculatus_F_contig13552.2642.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2519bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13552:574..3092- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCGAGGACCACGTGTCGATCACGAACGAAGTGCTGGGAAAGGGGGGCTT
TGGCGTGGTCTACCTGGCCGACTACAACGGTCACAACGCGGCGGCCAAGG
TATGAGTGAGCCATTCTCGACCTGTACAAAGGACGAAACATTTGCGAGTA
TAACCACCGAGCACTCCTGCCTGGGGAGCGGAAGGACCGAAATCCAACCG
GCAGGAGTCATTTTTCACCCCTTTTTCTTCTCCCGCTGTCGCGCTCTGTC
TGATTTGTTTTCGTGTTCCTGTCGACGTCGGTACATACATCGCTCGATGA
TACAGGTACAGCACATCACCCACGGCCTCGGCAAGCTTGGAGAGAACGAC
ATACCACTGAGTGAGCCAAGGACGATAGAGTCGAATGCGCTGCGGGAGAA
GGTCCAACGCAAGGCATTCCTGCGCGAACTGGACGCCATGATTCGCCTGA
GAAATCCTCATATCGTCAACGTGTACGGGGCGATCACCTCGCTGCCGGAC
CGCCTGGTTCTGGTCATGGAGCTGCTGGTGGGAGGTGACCTCCGGACCAT
GCTGAAGAGCTCTGAGCAGTCGCTTCCCGAGGATAAGTGCCGACAGATCA
TCCAGGATGTCTGCACGGGCATGGCCTTCCTGCACAGCAAGGCGACGGTG
CATGGCGACCTCAAGTCTGCCAATGTTCTTCTCGATGGCCGCGGAAGGGC
AAAGGCACGTTGGGTGTCTGGGGGTTGTCTTGTGCTATATGTAGATCGTG
TCGTATTTCCGCGCTTGCTATGGTCCTGGCTGTCTGTAGAAGGGTTGTGG
ACGTACCCCGCGTTCCTTTCGCCGCGGCTCTGACGATTCACATGCGCCCC
CTTTGCTTTACACCTGGAGCTACAGGATGGCTCCCATGTATTTGTTTGTC
GGTGGTGATGGTGTTGAATTCGGCCGAAGAAAGAGCCGACTGTACCCAAC
TCCTCACTTTTCCATAAACTTGAACATGAGTTCGTCGTCACAGTAAGTAA
TGTTCAAGCCCACAACATCGCCCACAAAATTTCTAAACATAGTTTTGTAC
CCCGCTGATTTTTCGGGTGATCCCTCCAGATTGCGGACTTCGGCACCTCG
AGGTGGGCTCAGAACACCGAGAGATCCACAGGCCTCGCCACGTACACCAC
GAATCCGCCAAGCGCCCACATCAGCTTTGCATGGACTGCACCAGAGGTAA
GCAGACGGCCTGGGTTTCTATCGTTTTCTCCGCTGGGCTTGTACGGTTGT
TACCAACAAGGCCGACGTGCGGGGTATGAGCCTCTGTCGATCTGGAAAAA
CACCGAACACGCCTGTGGCTTGAACGAATGCACGCGGAATAATCATTGTG
GCTGAGATGCACTTGAGCTTCTCACAGCGTGGAGAGGTTATGGCCATGTG
TACATCCAGAGAAACCTATAGACTGAACGGCGTGCGCAAATCTATCCGCA
AAACGTTAGGCGGCGTTGAGCGTCTAGGCAAGACGGCAGGGCGTTTTTTT
GAAACTATTTCATGTAGGTCTGGAAGCTCGACGTCTCCGTCGTCTTGGAA
ATCGTCTTCTCGCTATTCTTCTTCTCCGACGGATAAAAGTGGCGTTGTCT
CGTGTGGCGCGGTGGCGAACAAGAAACACAAACATGTACCAACGGCTGTA
GGTATACACTGCCGCTCAAACTGTGCGATCCCCCAGAAATGTTGGTGTAC
TGTTATTCCGTTCACCATTTTCTACAGGTCCGTGCGCACTTGTAGATGCA
AAAACTGACAGTTTTGGCGCTACCCCGCGCCTAACCGGCTAGCTGTGCCG
TCACGACGGTTCGAGGGATTTCGAACCCAGTTTTGACGACAAGATCAGCC
TGACCAAAACAGGACTGGACTACTCTATGAGAGACCTTTGCATCACCCAA
GCGCGAAACTAAATGGGGCATGCTTAGTGGCCCTCGATGGTTGCGAAACT
CAAGTACAGGGATATATAGCTGCATTATTTCCGTTATGCGGTCAAAGCAA
ACGTGAGCAGAGCCATCTCGAACCACGGGCGTTCTTCAAAGCAATTGACA
TTGCCTCTGCGGTGTCAACACCGGCTGCCGAGCAGTGCGGGACGTTCCCG
GTGCTGTTGGTGTTCTACGTGGGCGGTGCTTAGTTTGGCGGGCACCCATC
CGAAGTGGACCAATTGGGACATTTACGGTGCGTTTCTCTCGTTGATCGCC
CTCCGGCGATCCAGCGATCCTAGCGGCAACAGTATATCGCATGGCGTTGA
ACAGGAAAAGGTGTGGTACTGGCTAACGTAAGGTGCAATTCGCATGTAAA
TTGTTCTATACTGGAGTACCTGCGATCGACGAAGCCTCTCCTGGGCGTTG
TGATTGCGCGTCTGACATTGTTTCTTCCATCTGCGTGCGAGTAGGTGCTG
GTGTCCAACAAAACCTCCAAGGCGAGCGACATCTACAGCTTCGGGATGGT
GGCCTGGGAGGTGCTGACGAGACAGATACCTTGGGCGGACGAAGCTCGTC
CTCGAGACATCTACCTCCG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13552:574..3092-

>mRNA_E-fasciculatus_F_contig13552.2642.1 ID=mRNA_E-fasciculatus_F_contig13552.2642.1|Name=mRNA_E-fasciculatus_F_contig13552.2642.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1476bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13552:574..3092- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCGAGGACCACGTGTCGATCACGAACGAAGTGCTGGGAAAGGGGGGCTT
TGGCGTGGTCTACCTGGCCGACTACAACGGTCACAACGCGGCGGCCAAGC
CCGAGGACCACGTGTCGATCACGAACGAAGTGCTGGGAAAGGGGGGCTTT
GGCGTGGTCTACCTGGCCGACTACAACGGTCACAACGCGGCGGCCAAGGT
ACAGCACATCACCCACGGCCTCGGCAAGCTTGGAGAGAACGACATACCAC
TGAGTGAGCCAAGGACGATAGAGTCGAATGCGCTGCGGGAGAAGGTCCAA
CGCAAGGCATTCCTGCGCGAACTGGACGCCATGATTCGCCTGAGAAATCC
TCATATCGTCAACGTGTACGGGGCGATCACCTCGCTGCCGGACCGCCTGG
TTCTGGTCATGGAGCTGCTGGTGGGAGGTGACCTCCGGACCATGCTGAAG
AGCTCTGAGCAGTCGCTTCCCGAGGATAAGTGCCGACAGATCATCCAGGA
TGTCTGCACGGGCATGGCCTTCCTGCACAGCAAGGCGACGGTGCATGGCG
ACCTCAAGTCTGCCAATGTTCTTCTCGATGGCCGCGGAAGGGCAAAGGTA
CAGCACATCACCCACGGCCTCGGCAAGCTTGGAGAGAACGACATACCACT
GAGTGAGCCAAGGACGATAGAGTCGAATGCGCTGCGGGAGAAGGTCCAAC
GCAAGGCATTCCTGCGCGAACTGGACGCCATGATTCGCCTGAGAAATCCT
CATATCGTCAACGTGTACGGGGCGATCACCTCGCTGCCGGACCGCCTGGT
TCTGGTCATGGAGCTGCTGGTGGGAGGTGACCTCCGGACCATGCTGAAGA
GCTCTGAGCAGTCGCTTCCCGAGGATAAGTGCCGACAGATCATCCAGGAT
GTCTGCACGGGCATGGCCTTCCTGCACAGCAAGGCGACGGTGCATGGCGA
CCTCAAGTCTGCCAATGTTCTTCTCGATGGCCGCGGAAGGGCAAAGATTG
CGGACTTCGGCACCTCGAGGTGGGCTCAGAACACCGAGAGATCCACAGGC
CTCGCCACGTACACCACGAATCCGCCAAGCGCCCACATCAGCTTTGCATG
GACTGCACCAGAGATTGCGGACTTCGGCACCTCGAGGTGGGCTCAGAACA
CCGAGAGATCCACAGGCCTCGCCACGTACACCACGAATCCGCCAAGCGCC
CACATCAGCTTTGCATGGACTGCACCAGAGGTGCTGGTGTCCAACAAAAC
CTCCAAGGCGAGCGACATCTACAGCTTCGGGATGGTGGCCTGGGAGGTGC
TGACGAGACAGATACCTTGGGCGGACGAAGCTCGTCCTCGAGACATCTAC
CTCGTGCTGGTGTCCAACAAAACCTCCAAGGCGAGCGACATCTACAGCTT
CGGGATGGTGGCCTGGGAGGTGCTGACGAGACAGATACCTTGGGCGGACG
AAGCTCGTCCTCGAGACATCTACCTC
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