mRNA_E-fasciculatus_F_contig13546.2637.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13546.2637.1
Unique NamemRNA_E-fasciculatus_F_contig13546.2637.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 9.070e-127
Identity = 210/250 (84.00%), Postives = 215/250 (86.00%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVR-------------EVVLFACSKXXXXXXXXXXXX------RDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVR              V++ A  +                  RDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKAS+GINLSEDIFAGYNGTIRGGQ+
Sbjct: 1363 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVRVSRDSTSSAQEYFSVLIKAHDQRGQGDADGSKRGGGGAGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASRGINLSEDIFAGYNGTIRGGQI 1612
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.460e-100
Identity = 162/231 (70.13%), Postives = 188/231 (81.39%), Query Frame = 1 
Query:    4 LVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVREVVLFACSKXXXXXXXXXXXXRDDG-IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            L+ QKF YVV CQVYGRMK+NQDPKADDI+ +L R+PNLRVAYIDEVR       ++            +  G ++E+YR+KLPGNPV+GEGKPENQNHA++FTRGE+L AIDMNQ+ YFEEALKMR LL+EF   T   P  ++GFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLR R+HYGHPD+FDK+FFMT GG+SKASKGINLSEDIFAG+N  +RGG V
Sbjct:  875 LIKQKFGYVVTCQVYGRMKRNQDPKADDIDFILNRWPNLRVAYIDEVRN------TRDATTEFYSVLIKKAAGNVEEIYRIKLPGNPVLGEGKPENQNHAVVFTRGENLMAIDMNQDNYFEEALKMRNLLQEFHKSTRDVPITILGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRQRLHYGHPDIFDKLFFMTRGGISKASKGINLSEDIFAGFNNQLRGGNV 1099
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BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A6A5A3K6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A3K6_9STRA)

HSP 1 Score: 302 bits (774), Expect = 6.750e-100
Identity = 156/232 (67.24%), Postives = 174/232 (75.00%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVR-----EVVLFACSKXXXXXXXXXXXXRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIR 681
            +LV  KF YVVACQVYGR K+N D KA DIE LL RFPNLRV+YIDEVR     E+  F+                   + E YR++LPGNP++GEGKPENQN A+IFTRGEHLQ IDMNQ+GY EEALKMR LLEEF  G   RP  +VG  EHIFTGS+SSLANYMALQE SFVTLGQR L  PLRVRMHYGHPD+F+K+FFMT GG SKASKGINLSEDIFAGYN  +R
Sbjct:   96 DLVKAKFTYVVACQVYGRQKRNNDAKAKDIEFLLHRFPNLRVSYIDEVRVNYQKELSYFSV--------LIKGTETPSEVVECYRIRLPGNPILGEGKPENQNSAVIFTRGEHLQTIDMNQDGYLEEALKMRNLLEEFSAGN--RPCTIVGLPEHIFTGSISSLANYMALQETSFVTLGQRTLTRPLRVRMHYGHPDVFNKLFFMTRGGFSKASKGINLSEDIFAGYNNCLR 317
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A662XXI8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXI8_9STRA)

HSP 1 Score: 313 bits (801), Expect = 2.470e-99
Identity = 158/232 (68.10%), Postives = 180/232 (77.59%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVREVVLFACSKXXXXXXXXXXXXRDDG-IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            EL+  KF YVVACQ+YGR KKN DPKA+DIE LL RFPNLRVAYIDEVR        K             + G + E+YRV+LPGNP++GEGKPENQN A++FTRGE+LQ IDMNQ+GY EE LKMR LLEEF  GTA RP  +VG  EHIFTGSVSSLANYMALQE SFVTL QR L  PLR+R+HYGHPD+F+K+FF+T GG+SKASKGINLSEDIFAGYN  +RGG V
Sbjct:  441 ELINTKFSYVVACQIYGRQKKNNDPKANDIEFLLHRFPNLRVAYIDEVR----VNYQKEQSYFSVLIKGGEELGAVHEIYRVRLPGNPILGEGKPENQNAAIVFTRGENLQTIDMNQDGYLEEGLKMRNLLEEFDRGTADRPYTIVGIPEHIFTGSVSSLANYMALQETSFVTLNQRTLARPLRMRLHYGHPDVFNKLFFITRGGISKASKGINLSEDIFAGYNNCMRGGSV 668
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: B8CDT6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDT6_THAPS)

HSP 1 Score: 311 bits (796), Expect = 9.430e-99
Identity = 153/236 (64.83%), Postives = 185/236 (78.39%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVR-----EVVLFACSKXXXXXXXXXXXXRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            +L+ +KF Y+V+CQVYG+MK++QDPKADDI+ L+ R+P+LR+AYID VR     E+  ++C               +  IQE+YRV+L GNP++GEGKPENQNHAMIFTRGE +Q IDMNQEGYFEEALKMR  L+EF       P  ++G REHIFTGSVSSLANYMALQE SFVTLGQRVL  PL +R+HYGHPD+FDK+FF+T GG+SK+SKGINLSEDIFAGYN  IRGGQV
Sbjct:  139 DLMGEKFGYIVSCQVYGQMKRDQDPKADDIDQLMHRYPHLRIAYIDSVRLNRSGEMAFYSC---------LVKSNGNGKIQEIYRVRLAGNPILGEGKPENQNHAMIFTRGEFVQTIDMNQEGYFEEALKMRNALQEFAKRDGPMPITILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLTKPLCIRLHYGHPDVFDKLFFITRGGISKSSKGINLSEDIFAGYNNAIRGGQV 365
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A397F3G1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F3G1_9STRA)

HSP 1 Score: 302 bits (774), Expect = 3.460e-97
Identity = 156/232 (67.24%), Postives = 174/232 (75.00%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVR-----EVVLFACSKXXXXXXXXXXXXRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIR 681
            +LV  KF YVVACQVYGR K+N D KA DIE LL RFPNLRV+YIDEVR     E+  F+                   + E YR++LPGNP++GEGKPENQN A+IFTRGEHLQ IDMNQ+GY EEALKMR LLEEF  G   RP  +VG  EHIFTGS+SSLANYMALQE SFVTLGQR L  PLRVRMHYGHPD+F+K+FFMT GG SKASKGINLSEDIFAGYN  +R
Sbjct:  321 DLVKAKFTYVVACQVYGRQKRNNDAKAKDIEFLLHRFPNLRVSYIDEVRVNYQKELSYFSV--------LIKGTETPSEVVECYRIRLPGNPILGEGKPENQNSAVIFTRGEHLQTIDMNQDGYLEEALKMRNLLEEFSAGN--RPCTIVGLPEHIFTGSISSLANYMALQETSFVTLGQRTLTRPLRVRMHYGHPDVFNKLFFMTRGGFSKASKGINLSEDIFAGYNNCLR 542
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BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: W7U1M2_9STRA (1,3-beta-glucan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M2_9STRA)

HSP 1 Score: 320 bits (819), Expect = 5.030e-97
Identity = 161/235 (68.51%), Postives = 188/235 (80.00%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVREVVLFACSKXXXXXXXXXXXXRDD---GIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFR-GGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            +L+ +KF YVVACQVYG++KK QD KADDI+ LL+RFP+LRVAYIDE +       SK             +D   GI+E+YRV+LPGNPV+GEGKPENQNHAMIF+RGEH+QAIDMNQEGYFE+A KMR  L+EF   G+   P  ++GFREHIFTG+VSSLANYMALQE SFVTLGQRVLN PLR+R+HYGHPDLFDK+FFM  GG+SKASKGINLSEDIFAGYN  +RGG V
Sbjct: 1499 QLIKRKFGYVVACQVYGKLKKEQDSKADDIDFLLRRFPSLRVAYIDERQ-------SKSGESSFFSVLIRANDAGTGIEEIYRVRLPGNPVLGEGKPENQNHAMIFSRGEHVQAIDMNQEGYFEDAYKMRNFLQEFALTGSPDMPTTILGFREHIFTGAVSSLANYMALQEYSFVTLGQRVLNRPLRMRLHYGHPDLFDKLFFMQNGGISKASKGINLSEDIFAGYNNLLRGGSV 1726
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA)

HSP 1 Score: 317 bits (811), Expect = 5.730e-96
Identity = 163/232 (70.26%), Postives = 182/232 (78.45%), Query Frame = 1 
Query:    4 LVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVREVVLFACSKXXXXXXXXXXXXRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARR--PAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            L+ +KFQ+VV+CQVYGRMKK QDPKADDI+ LLKR+ NLR+AYIDE                                   LPGNPV+GEGKPENQNHA+IFTRGEH+QAIDMNQEGYFEEA+KMRCLL+EF     +R  P  +VGFREHIFTGSVSSLANYMALQELSFVT+GQRVL++PLR+RMHYGHPDLFDKVFFMT GG+SKASKGINLSEDIFAGYN TIRGGQV
Sbjct: 1129 LIRRKFQFVVSCQVYGRMKKIQDPKADDIDRLLKRYENLRIAYIDE-----------------------------------LPGNPVIGEGKPENQNHALIFTRGEHVQAIDMNQEGYFEEAIKMRCLLQEF---LRKRDPPTTIVGFREHIFTGSVSSLANYMALQELSFVTIGQRVLDDPLRIRMHYGHPDLFDKVFFMTRGGMSKASKGINLSEDIFAGYNNTIRGGQV 1322
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.100e-95
Identity = 166/241 (68.88%), Postives = 187/241 (77.59%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVR-----EVVLFACSKXXXXXXXXXXXXRDDG---IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARR--PAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            EL+ +KF YVVACQVYGRMKK QD KA+DIE L+ RFP++RVAYID VR     E V F+               + +G   I+E+YRV+LPGNPV+GEGKPENQNHA+IFTRGE LQ IDMNQEG+FEEALKMR LL+EF  G      P  +VGFREHIFTGSVSSLANYMALQE SFVTLGQRVLN PL  R+HYGHPD+FDK+FFMT GGVSKASKGINLSEDIFAGYN  +RGG V
Sbjct: 1317 ELISEKFGYVVACQVYGRMKKEQDSKAEDIEDLMHRFPHVRVAYIDTVRVNREGESVFFSV------------LVKSNGAGKIEEIYRVRLPGNPVIGEGKPENQNHAVIFTRGEMLQTIDMNQEGFFEEALKMRNLLQEFDHGKGSEGMPTTIVGFREHIFTGSVSSLANYMALQETSFVTLGQRVLNKPLCSRLHYGHPDVFDKLFFMTRGGVSKASKGINLSEDIFAGYNNLVRGGGV 1545
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Match: A0A5D6XLF6_9STRA (1,3-beta-glucan synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLF6_9STRA)

HSP 1 Score: 315 bits (807), Expect = 2.070e-95
Identity = 159/232 (68.53%), Postives = 180/232 (77.59%), Query Frame = 1 
Query:    1 ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVREVVLFACSKXXXXXXXXXXXXRDDG-IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 693
            EL+  KF YVVACQVYGR K+N DPKA DIE LL RFPNLRVAYIDEVR        K             + G + EVYR++LPGNP++GEGKPENQN A++FTRGE+LQ IDMNQ+GY EEALKMR +LEEF  GT  RP  +VG  EHIFTGSVSSLANYMALQE SFVTLGQR L  PLRVR+HYGHPD+F+K+FF+T GG+SKASKGINLSEDIFAGYN  +RGG V
Sbjct: 1808 ELIKTKFTYVVACQVYGRQKRNNDPKAKDIEFLLHRFPNLRVAYIDEVR----VNYQKEQSYFAVLIKGGEELGAVDEVYRIRLPGNPILGEGKPENQNAAIVFTRGENLQTIDMNQDGYLEEALKMRNMLEEFDSGTRDRPTTIVGLPEHIFTGSVSSLANYMALQETSFVTLGQRTLARPLRVRLHYGHPDVFNKLFFITRGGISKASKGINLSEDIFAGYNNCLRGGTV 2035
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13546.2637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFR3_9PHAE9.070e-12784.001,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CC... [more]
A0A7S2UV62_9STRA1.460e-10070.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6A5A3K6_9STRA6.750e-10067.24Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A662XXI8_9STRA2.470e-9968.10Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
B8CDT6_THAPS9.430e-9964.83Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A397F3G1_9STRA3.460e-9767.24Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W7U1M2_9STRA5.030e-9768.511,3-beta-glucan synthase n=2 Tax=Monodopsidaceae T... [more]
A0A835Z4B5_9STRA5.730e-9670.261,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S2QVX6_9STRA1.100e-9568.881,3-beta-glucan synthase (Fragment) n=1 Tax=Tripar... [more]
A0A5D6XLF6_9STRA2.070e-9568.531,3-beta-glucan synthase n=1 Tax=Pythium brassicum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13546contigE-fasciculatus_F_contig13546:179..2381 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.8
Seed ortholog evalue4.3e-84
Seed eggNOG ortholog36331.EPrPI00000013186
KEGG koko:K11000
EggNOG free text desc.Callose synthase. Source PGD
EggNOG OGs1MEIK@121069,KOG0916@1,KOG0916@2759
COG Functional cat.M
CAZyGT48
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons4
Model size693
Cds size693
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13546.2637.1prot_E-fasciculatus_F_contig13546.2637.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13546 179..2381 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927851.7886336-CDS-E-fasciculatus_F_contig13546:178..2831622927851.7886336-CDS-E-fasciculatus_F_contig13546:178..283Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 179..283 -
1695995723.1307948-CDS-E-fasciculatus_F_contig13546:178..2831695995723.1307948-CDS-E-fasciculatus_F_contig13546:178..283Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 179..283 -
1622927851.8072233-CDS-E-fasciculatus_F_contig13546:940..11751622927851.8072233-CDS-E-fasciculatus_F_contig13546:940..1175Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 941..1175 -
1695995723.144534-CDS-E-fasciculatus_F_contig13546:940..11751695995723.144534-CDS-E-fasciculatus_F_contig13546:940..1175Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 941..1175 -
1622927851.821696-CDS-E-fasciculatus_F_contig13546:1679..18621622927851.821696-CDS-E-fasciculatus_F_contig13546:1679..1862Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 1680..1862 -
1695995723.154887-CDS-E-fasciculatus_F_contig13546:1679..18621695995723.154887-CDS-E-fasciculatus_F_contig13546:1679..1862Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 1680..1862 -
1622927851.8375564-CDS-E-fasciculatus_F_contig13546:2211..23811622927851.8375564-CDS-E-fasciculatus_F_contig13546:2211..2381Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 2212..2381 -
1695995723.1691048-CDS-E-fasciculatus_F_contig13546:2211..23811695995723.1691048-CDS-E-fasciculatus_F_contig13546:2211..2381Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13546 2212..2381 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13546.2637.1

>prot_E-fasciculatus_F_contig13546.2637.1 ID=prot_E-fasciculatus_F_contig13546.2637.1|Name=mRNA_E-fasciculatus_F_contig13546.2637.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=231bp
ELVVQKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVRE
VVLFACSKKGGGGGGGGAGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHA
MIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREH
IFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFM
TAGGVSKASKGINLSEDIFAGYNGTIRGGQV
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mRNA from alignment at E-fasciculatus_F_contig13546:179..2381-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13546.2637.1 ID=mRNA_E-fasciculatus_F_contig13546.2637.1|Name=mRNA_E-fasciculatus_F_contig13546.2637.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2203bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13546:179..2381- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGCTGGTGGTGCAGAAGTTCCAGTACGTGGTGGCCTGCCAGGTGTACGG
TCGCATGAAGAAGAACCAGGACCCCAAGGCGGACGACATCGAGATCCTCC
TCAAGCGCTTCCCGAACCTTCGCGTTGCCTACATCGACGAGGTGCGTGAA
GTTGTTCTTTTTGCTTGCTCGTGCCGTATTCTTGTCGTCGTTGGTTGTGT
GTTTTGTGTGTTCTTTACTATAGTGCAGGGTAAGTATCAAAGGGACACCC
GTTCTTGTTGTCTTGCTGTCTTTGTGTGTTGTGTTTCGTGTGTTCTTTTG
TGTACGGTAGAAATGTCAAGGGCGCTATGCACTACGCACATGTACCCCCC
TCCCGCGGCCACCTGGACCTCGCTCACGCAACGGAAAACATGCCTAAAAG
AAACGTGCGGTTCCTGAGCAGGTTCGCGTGTCCCGGGACTCTACGTCCTC
TGCCCAAGAGTACTTCTCGGTGCTCATCAAGGCGCACGACCAGGGAGGAC
AAGGGGAGGCGGACGGTAGCAAGAAGGGCGGCGGCGGCGGCGGTGGCGGC
GCTGGCGGGAGGGACGACGGCATCCAGGAGGTGTACCGCGTGAAGCTGCC
GGGCAACCCGGTGGTCGGAGAGGGGAAGCCCGAAAACCAGAACCACGCCA
TGATCTTCACGAGGGGGGAGCACCTGCAGGCCATCGACATGAACCAGGAA
GGGTGAGCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCGAGCGTGGTTCTGCGCTTTTGCGTGATGACGCAAGTAGTGA
CATAGGTCGCCATGCCTCCCCTATACCTAGCTCCCGTCGCGGGACGTTAT
CGTCCTGTGGTTTTGTAGAGCCGTGCATTATGATAGTCTCGGTAGGCTCG
TGACCTCAGCTAGTGCACGTGGCGTTGGAAGTTGTGTGGCTTTTTGCGGC
AATTCGGCTGGTGGTGGGTAGTTTATAAAGTAGGGACGCTATCGGGGTAA
GTGGAAGCAGGGGAAGAAAGTGGACGTGTTGTCGTTGTTGTTGTTGTTGT
TGTTGTGGCTGATGTAGACGTTTGTGTGGGATGGTCGTCCTTTTGACGCT
TAGGCTTGGATAGTTTTCATCATCTCGCCACAACGATCACAAGACCTACA
ACCCCTTCTCACCAAGCAACCTCCACCTCCCCTGCCCCCCCCCCCCCGAC
ACAAAGCTACTTCGAGGAGGCCCTGAAGATGCGCTGCCTGCTGGAGGAGT
TCCGGGGGGGTACCGCCCGCCGCCCCGCCGTCGTCGTCGGGTTCCGCGAG
CACATCTTCACGGGTAGCGTTAGCTCGCTGGCCAACTACATGGCCCTGCA
GGAGCTGTCCTTCGTGACGCTGGGGCAGAGGGTGCTCAACAACCCGCTCA
GGGTCCGCATGCACTACGGCCACCCGGACCTGTTCGACAAGGTGAGAGTG
GGGGGGTACGGGAGGGGGGCTACTCATGTAAGCGCGTGCCGTAGTCGTTA
TACCGTACAAAAGTGCCGTAGTCGTTATACCGTACAATAGTCGTGTTGGC
GAAGGGAAAGTGGTTGTTAGAGCTTTGCATCCCTACAATACAAATTCCGG
GACGGAGGAGGAGCGAGATGATGTGGGCTTTCGCCGGCCCAGGCTATTGT
ATACGCTTCACAATGAGGAAGGAGAATCTGGTCAGCATCCTTGCGTTTGC
TATTCCAATCCAGATGTGCCAAGTGGGGGGGTTGGGCAGGCGAGGGGTGG
CGTCGTGGTGTGTGCGGCGTTGGCAGTTGTGCGGTGGCAGCTTGTTGAGA
ATCTGTGGTGGCCGGGGGGCTACAGTACAGGCGATCTGAACGGCGGTAGG
GGGAAATTTGTGAAAGCACATGGGCTTCTTTTTTCTGTCCTTTTTGTATT
CGCTCACAGCTTTGGAAACGCACGGGTGGTGGTAGTCCGAGCGAGCCAGC
TCGGCGATTGAGCTGTTTTGAATCCTTGTGTTTTTCGGGAAAGGTTTAAT
GTGTGACCCTCCCTCGCAGATTCCATCCGATGCATTGATCTGGTCGATCG
GCGTAGATATCTGATCCCTTCCTGGTTCGTGTGTGTGTGTGTGTCCAGGT
GTTCTTCATGACGGCAGGCGGTGTGAGCAAGGCATCCAAGGGTATCAACC
TGTCTGAGGACATCTTCGCCGGATACAACGGAACCATTCGGGGAGGGCAG
GTA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13546:179..2381-

>mRNA_E-fasciculatus_F_contig13546.2637.1 ID=mRNA_E-fasciculatus_F_contig13546.2637.1|Name=mRNA_E-fasciculatus_F_contig13546.2637.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13546:179..2381- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGCTGGTGGTGCAGAAGTTCCAGTACGTGGTGGCCTGCCAGGTGTACGG
TCGCATGAAGAAGAACCAGGACCCCAAGGCGGACGACATCGAGATCCTCC
TCAAGCGCTTCCCGAACCTTCGCGTTGCCTACATCGACGAGGTGCGTGAA
GTTGTTCTTTTTGCTTGCTCGAGCTGGTGGTGCAGAAGTTCCAGTACGTG
GTGGCCTGCCAGGTGTACGGTCGCATGAAGAAGAACCAGGACCCCAAGGC
GGACGACATCGAGATCCTCCTCAAGCGCTTCCCGAACCTTCGCGTTGCCT
ACATCGACGAGGTGCGTGAAGTTGTTCTTTTTGCTTGCTCCAAGAAGGGC
GGCGGCGGCGGCGGTGGCGGCGCTGGCGGGAGGGACGACGGCATCCAGGA
GGTGTACCGCGTGAAGCTGCCGGGCAACCCGGTGGTCGGAGAGGGGAAGC
CCGAAAACCAGAACCACGCCATGATCTTCACGAGGGGGGAGCACCTGCAG
GCCATCGACATGAACCAGGAAGGCAAGAAGGGCGGCGGCGGCGGCGGTGG
CGGCGCTGGCGGGAGGGACGACGGCATCCAGGAGGTGTACCGCGTGAAGC
TGCCGGGCAACCCGGTGGTCGGAGAGGGGAAGCCCGAAAACCAGAACCAC
GCCATGATCTTCACGAGGGGGGAGCACCTGCAGGCCATCGACATGAACCA
GGAAGGCTACTTCGAGGAGGCCCTGAAGATGCGCTGCCTGCTGGAGGAGT
TCCGGGGGGGTACCGCCCGCCGCCCCGCCGTCGTCGTCGGGTTCCGCGAG
CACATCTTCACGGGTAGCGTTAGCTCGCTGGCCAACTACATGGCCCTGCA
GGAGCTGTCCTTCGTGACGCTGGGGCAGAGGGTGCTCAACAACCCGCTCA
GGGTCCGCATGCACTACGGCCACCCGGACCTGTTCGACAAGCTACTTCGA
GGAGGCCCTGAAGATGCGCTGCCTGCTGGAGGAGTTCCGGGGGGGTACCG
CCCGCCGCCCCGCCGTCGTCGTCGGGTTCCGCGAGCACATCTTCACGGGT
AGCGTTAGCTCGCTGGCCAACTACATGGCCCTGCAGGAGCTGTCCTTCGT
GACGCTGGGGCAGAGGGTGCTCAACAACCCGCTCAGGGTCCGCATGCACT
ACGGCCACCCGGACCTGTTCGACAAGGTGTTCTTCATGACGGCAGGCGGT
GTGAGCAAGGCATCCAAGGGTATCAACCTGTCTGAGGACATCTTCGCCGG
ATACAACGGAACCATTCGGGGAGGGCAGGTAGTGTTCTTCATGACGGCAG
GCGGTGTGAGCAAGGCATCCAAGGGTATCAACCTGTCTGAGGACATCTTC
GCCGGATACAACGGAACCATTCGGGGAGGGCAGGTA
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