mRNA_E-fasciculatus_F_contig13542.2635.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 223 bits (569), Expect = 1.250e-61 Identity = 133/233 (57.08%), Postives = 163/233 (69.96%), Query Frame = 1
Query: 1 QLTCSKCLNSGEDEDG-GDFDSAADTNA-----ESDSGSVSEKSKLNRRRPSSGKKQNFIPLTSSPREPLVVPLDDEHADRMFEMYQPPTGT----ATEERE*ED*GD*NLTLLDFTDAASCLAKGEPVSGDTWRKCEKDDPGLYGITVRRAGKDGETIPGTNVTSGKGKAGEVVELKVEKGYNQFTIEWSKKGGNGNSHSAYITEDVLCDRDDDQGVATLDEAKEKMGVFYV 669
+ TCS+C + D+DG GDF S T+ ++DSGSVS SK RRR S+GKK N IP TSSPRE L+VP DD+ A+ M +Y+ A E + ++ NLTLLD T+AASCL KG PVS + WRKCEK++ GLYGITVRRAG GETIPGT VTS KG+ GE+VE K+++GY FT+EWS+ G N SAY TEDVL DRDD+QGVATL+EAKEKMGVF +
Sbjct: 499 ERTCSRCQRA--DDDGVGDFSSGGVTDGPDKYTDTDSGSVSGNSK--RRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVR--NLTLLDLTEAASCLDKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGTEVTSDKGRRGELVEAKMDEGYTVFTVEWSE--GKSNRRSAYSTEDVLRDRDDNQGVATLEEAKEKMGVFLL 723
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: D7FVQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ8_ECTSI) HSP 1 Score: 216 bits (549), Expect = 1.330e-59 Identity = 130/233 (55.79%), Postives = 160/233 (68.67%), Query Frame = 1
Query: 1 QLTCSKCLNSGEDEDG-GDFDSAADTNA-----ESDSGSVSEKSKLNRRRPSSGKKQNFIPLTSSPREPLVVPLDDEHADRMFEMYQPPTGT----ATEERE*ED*GD*NLTLLDFTDAASCLAKGEPVSGDTWRKCEKDDPGLYGITVRRAGKDGETIPGTNVTSGKGKAGEVVELKVEKGYNQFTIEWSKKGGNGNSHSAYITEDVLCDRDDDQGVATLDEAKEKMGVFYV 669
+ TCS+C + D+DG GDF + T+ +++SGSVS SK RRR S+GKK N IP TSSPRE L+VP DD+ A M +Y+ A E + ++ NLTLLD T+AASCLAKG PV + WRKCEK++ LYGITVRRAG GETIPGT VTS KG+ GEVVE K+++GY FT+EWS+ G N SAY TEDVL RDD+QGVATL+EAKEKMGVF +
Sbjct: 537 ERTCSRCQRA--DDDGVGDFSTGGVTDGPDEYTDTESGSVSGNSK--RRRRSAGKKDNCIPRTSSPRELLMVPKDDQQAKLMLSLYRKAREMERKLAGENKRIKEVR--NLTLLDLTEAASCLAKGSPVREEIWRKCEKENYALYGITVRRAGPTGETIPGTKVTSDKGRRGEVVEAKMDEGYTVFTVEWSE--GKSNRRSAYSTEDVLRTRDDNQGVATLEEAKEKMGVFLL 761
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: D7FZH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH0_ECTSI) HSP 1 Score: 184 bits (466), Expect = 7.060e-48 Identity = 91/140 (65.00%), Postives = 104/140 (74.29%), Query Frame = 3
Query: 660 FLRATLCMVNVQVHKFITNDAKVENTNPTCPLTGPKTGDITQGRKHASEETRKACAVDMLMQNEIKFLDSAEDQGLLAEMKKERSCFKMMGLDDYDRIGRTGLVASTEDFNSKHLAFVNHFVRGAQASFRLGRPTNLASS 1079
FLR+ CM +VQ H+FITN+ KV + T PL+ K+ DI GRKHA EET ACAVDML+ NEI L S ED LL EMK +SCF MGLDDY RIG+ GL+ S EDFNSKHL F+NHFVRGAQASFRLGRP +LASS
Sbjct: 1032 FLRSARCMADVQFHEFITNNVKVHDAKSTRPLSQDKSDDIINGRKHAWEETEAACAVDMLLPNEIDLLKSGEDPDLLGEMKAPKSCFAFMGLDDYARIGQFGLIKSNEDFNSKHLPFLNHFVRGAQASFRLGRPISLASS 1171
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: A0A6H5JY76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY76_9PHAE) HSP 1 Score: 142 bits (359), Expect = 6.330e-35 Identity = 82/145 (56.55%), Postives = 97/145 (66.90%), Query Frame = 3
Query: 654 GGFLRATLCMVNVQVHKFITNDAKVEN---TNPTCPLTGPKTGDITQGRKHASEETRKACAVDMLMQNEIKFLDSAEDQGLLAEMKKERSCFKMMGLDDYDRIGRTGLVASTEDFNSKHLAFVNHFVRGAQASFRLGRPTNLASS 1079
G FL ATLCMVNVQV++FIT + K+EN ++ T PL K DIT+GR HA EET+K D+GL EM+ E++CF+MMGL + R TGLV STEDF KHLA VNHFVRGAQASFRLGRPTN+ASS
Sbjct: 49 GVFLLATLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKVDITKGRNHAWEETKK-------------------DKGLRVEME-EKACFEMMGLINDARAHFTGLVRSTEDFQDKHLALVNHFVRGAQASFRLGRPTNMASS 173
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: A0A6H5JW77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW77_9PHAE) HSP 1 Score: 125 bits (314), Expect = 8.160e-29 Identity = 74/141 (52.48%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 124 RRRPSSGKKQNFIPLTSSPREPLVVPLDDEHADRMFEMYQPPTGT----ATEERE*ED*GD*NLTLLDFTDAASCLAKGEPVSGDTWRKCEKDDPGLYGITVRRAGKDGETIPGTNVTSG-KGKAGEVVELKVEKGYNQFT 531
RRR S+GKK N IP TSSPRE L+VP DD+ A+R+ +Y+ A E + + NLTLLD T+AASCL KG PVS + WRKCEK++ GLYGITV RAG GETIPGT VTS +GK + + + KG T
Sbjct: 282 RRRRSAGKKHNRIPTTSSPRESLMVPKDDQQAERILILYRKAREMERKLAGENKRINEVR--NLTLLDLTEAASCLDKGNPVSEEIWRKCEKENYGLYGITVHRAGPTGETIPGTKVTSDCRGKLLQRSQAQFTKGATAAT 420
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 8.570e-18 Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 3
Query: 660 FLRATLCMVNVQVHKFITNDAKVENTNPTCPLTGPKTGDITQG-RKHASEETRKACAVDMLMQNEIKFLDSAEDQGLLAEMKKERSCFKMMGLDDYDRIGRTGLVASTEDFNSKHLAFVNHFVRGAQASFRLGRPTNLAS 1076
FLR LCMVNVQV ++ T+ ++ D T RK A EE + + + EIK L+S D L+ +++K S F M+GLD + GLV E+F+ + + F NHF+RGAQ +++LGRPT+ S
Sbjct: 968 FLRGVLCMVNVQVRRYTTSSENRVTRRRNLYTLPSESADRTMAMRKTAYEEIQDVSSASTMTPYEIKILESPSDPELVRDLEKAGSFFTMLGLDGFKDTQELGLVYVREEFHKRQVEFANHFIRGAQVAWKLGRPTSFES 1107
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 3.930e-16 Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 3
Query: 660 FLRATLCMVNVQVHKF-ITNDAKVENTNPTCPLTGPKTGDITQGRKHASEETRKACAVDMLMQNEIKFLDSAEDQGLLAEMKKERSCFKMMGLDDYDRIGRTGLVASTEDFNSKHLAFVNHFVRGAQASFRLGRPTNLAS 1076
FLR LCMVNVQV K+ I +D K++ L R A + + D + + E L + GLL E +++ S F +GLD Y TG V + F+ +H+ FVNHFVRGAQ+S++LGRPT++ S
Sbjct: 858 FLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGG-GLLEEARRDGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVES 996
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: A0A6H5L2T9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T9_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 3.970e-15 Identity = 52/140 (37.14%), Postives = 74/140 (52.86%), Query Frame = 3
Query: 660 FLRATLCMVNVQVHKF-ITNDAKVENTNPTCPLTGPKTGDITQGRKHASEETRKACAVDMLMQNEIKFLDSAEDQGLLAEMKKERSCFKMMGLDDYDRIGRTGLVASTEDFNSKHLAFVNHFVRGAQASFRLGRPTNLAS 1076
FLR LCMVNVQV K+ I +D K++ L R A + + D + + E L + GLL E +++ S F +GL Y TG V + F+ +H+ FVNHFVRGAQ+S++LGRPT++ S
Sbjct: 89 FLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGG-GLLEEGRRDGSLFMALGLGRYRATNTTGFVTNGCRFHDRHMTFVNHFVRGAQSSWKLGRPTSVES 227
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: D8LK60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK60_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 4.020e-15 Identity = 64/130 (49.23%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 1 QLTCSKCLNSGEDEDG-GDFDSAADTNA-----ESDSGSVSEKSKLNRRRPSSGKKQNFIPLTSSPREPLVVPLDDEHADRMFEMYQPPTGT----ATEERE*ED*GD*NLTLLDFTDAASCLAKGEPVS 360
+ TCS+C + D+DG GDF S T+ ++DSGSVS SK RRR S+GKK N IP TSSPRE L+VP DD+ A+ MF +Y+ A E + + NLTLLD T+AASCL KG PVS
Sbjct: 552 ERTCSRCQRA--DDDGVGDFSSGGVTDGPDKYTDTDSGSVSGNSK--RRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMFSLYRKAREMERKLAGENKRINEVR--NLTLLDLTEAASCLDKGNPVS 675
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Match: D8LHA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA1_ECTSI) HSP 1 Score: 63.9 bits (154), Expect = 1.200e-7 Identity = 44/138 (31.88%), Postives = 76/138 (55.07%), Query Frame = 3
Query: 669 ATLCMVNVQVHKFITNDAKVENTNPTCPLTGPKTGDITQGRKHASEETRKACAVDMLMQNEIKFLDSAEDQGLLAEMKKERSCFKMMG--LDDYDRIGRTGLVASTEDFNSKHLAFVNHFVRGAQASFRLGRPTNLAS 1076
A L +V V V+KF+T +V+ L G + + R+ A E+ + A A ++ +E K L A D+GL E+ ++ + +++G LD Y +GLV D+ +H + V+H+V+GAQA+++LGR + S
Sbjct: 139 AILSLVYVPVYKFVTIVPRVKRKVKPVDLKGEDGKEAVELREFAWEKIKGAPATHVVNDHEKKLL--ASDEGLEQELCEKGTLARVLGINLDAY-----SGLVHEPRDYAKQHYSTVDHYVKGAQAAYKLGRVMSFQS 269 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13542.2635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13542.2635.1 >prot_E-fasciculatus_F_contig13542.2635.1 ID=prot_E-fasciculatus_F_contig13542.2635.1|Name=mRNA_E-fasciculatus_F_contig13542.2635.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=133bp MVNVQVHKFITNDAKVENTNPTCPLTGPKTGDITQGRKHASEETRKACAVback to top mRNA from alignment at E-fasciculatus_F_contig13542:860..1938- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13542.2635.1 ID=mRNA_E-fasciculatus_F_contig13542.2635.1|Name=mRNA_E-fasciculatus_F_contig13542.2635.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1079bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13542:860..1938- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13542:860..1938- >mRNA_E-fasciculatus_F_contig13542.2635.1 ID=mRNA_E-fasciculatus_F_contig13542.2635.1|Name=mRNA_E-fasciculatus_F_contig13542.2635.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=798bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13542:860..1938- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |