mRNA_E-fasciculatus_F_contig13539.2633.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13539.2633.1
Unique NamemRNA_E-fasciculatus_F_contig13539.2633.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: D8LM08_ECTSI (SPX domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM08_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 6.940e-121
Identity = 192/201 (95.52%), Postives = 195/201 (97.01%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            RCEIELRIAALLQAHLGG PRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDF VDSKFAKALLLGLAFACNFGGMVTPISSMQNVVA+QALENAGFTISFGTW+AVGIPFCVL VFIAWVVVCVVVNPNDVD+IPMIVHSRGD VSRKNVFII LTLLTIFGWSTIGETE FFGDVGIIALLFIIVAFGSGILSE
Sbjct:  383 RCEIELRIAALLQAHLGGRPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFHVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVARQALENAGFTISFGTWIAVGIPFCVLCVFIAWVVVCVVVNPNDVDSIPMIVHSRGDAVSRKNVFIISLTLLTIFGWSTIGETEGFFGDVGIIALLFIIVAFGSGILSE 583
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: A0A3R7K7S0_9STRA (SPX domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K7S0_9STRA)

HSP 1 Score: 224 bits (570), Expect = 8.740e-66
Identity = 110/201 (54.73%), Postives = 147/201 (73.13%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ      P LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S +AK LL+GLAFACN GGM+TPISS+QN +A   LE AG+T++FG W+A+ +PFC +G  + WV +  V++P D   IP IV+ +   +S  +V +I LTLLTIF W++   T   FGD+GII+L+F+ V FG+G+LS+
Sbjct:  346 KCQIELYIAAFLQRRFKKRPNLFLLAIMLMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTNSTYAKTLLIGLAFACNLGGMMTPISSLQNTLAVSFLEKAGYTVTFGQWMALAVPFCTVGTILCWVFLLWVMDPQDAKYIPQIVYDQKQKISSLHVVVIALTLLTIFLWASFSVTSATFGDLGIISLMFMFVMFGTGMLSQ 546
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: A0A3M6VJ86_9STRA (SPX domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ86_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.580e-65
Identity = 108/201 (53.73%), Postives = 148/201 (73.63%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ     SP LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG+TI+FG W+A+ +PFC +G  + W+ +  V++P D   IP IV+ +   +SR +V +I +TLLTIF W++   T   FGD+GII+++F+ + FG+G+LS+
Sbjct:  320 KCQIELYIAAFLQRRFKKSPNLFLLAIMLMGLFLSMWISNHTAPVLCVSVLLPIIRDFPRNSTYVKTLLIGLAFACNLGGMMTPISSLQNTLAVSFLEKAGYTITFGQWMAIAVPFCTVGTIMCWLFLLWVMDPRDATYIPQIVYDQKQKISRLHVVVISMTLLTIFLWASFSVTSTTFGDLGIISMMFMFIMFGTGMLSQ 520
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: F0WBX4_9STRA (Divalent anion:Na symporter (DASS) family protein pu n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBX4_9STRA)

HSP 1 Score: 218 bits (554), Expect = 4.610e-65
Identity = 111/201 (55.22%), Postives = 142/201 (70.65%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ      P LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG+TISFG W+A+ +PFC     + W  +  V +P D   IP IV+ +   +SR +V +I LTLLTI  W+T   T   FGD+GII+L+F+ V FG+GILS+
Sbjct:  152 KCQIELYIAAALQRRFKKRPNLFLLAIMLMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTNSAYVKTLLVGLAFACNLGGMMTPISSLQNTLAVSYLEKAGYTISFGQWMAMAVPFCTFTTILCWAFLLWVFDPKDAKCIPQIVYDQKQKISRVHVTVITLTLLTILLWATFTFTSPTFGDLGIISLIFMFVMFGTGILSQ 352
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BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: A0A5D6XQQ2_9STRA (SPX domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 9.070e-65
Identity = 110/201 (54.73%), Postives = 145/201 (72.14%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ     SP LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG++ISFG W+A+ +PFC +   + W+ +  V +P D   IP IV+ +   +S  +V +I LTLLTIF W+T   T   FGD+GII+L+F+ V FG+G+LS+
Sbjct:  348 KCQIELYIAAFLQRRFKKSPNLFLLAIMMMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTNSAYVKTLLIGLAFACNLGGMMTPISSLQNTLAVSYLEKAGYSISFGEWMALAVPFCTISTILCWLFLLWVFDPKDAKYIPQIVYDQKQKISSLHVTVIALTLLTIFLWATFSITSPTFGDLGIISLMFMFVMFGTGMLSQ 548
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: K3WUL6_GLOUD (SPX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL6_GLOUD)

HSP 1 Score: 221 bits (564), Expect = 9.530e-65
Identity = 110/201 (54.73%), Postives = 145/201 (72.14%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ     SP LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG++ISFG W+A+ +PFC +   + W+ +  V +P D   IP IV+ +   +S  +V +I LTLLTIF W+T   T   FGD+GII+L+F+ V FG+G+LS+
Sbjct:  374 KCQIELYIAAFLQRRFKKSPNLFLLAIMMMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTNSAYVKTLLIGLAFACNLGGMMTPISSLQNTLAVSYLEKAGYSISFGQWMALAVPFCTVSTILCWMFLLWVFDPKDAKYIPQIVYDQKQKISSLHVAVIALTLLTIFLWATFSVTSMTFGDLGIISLMFMFVMFGTGMLSQ 574
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: A0A484DYF7_BRELC (SPX domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYF7_BRELC)

HSP 1 Score: 221 bits (562), Expect = 1.360e-64
Identity = 104/201 (51.74%), Postives = 146/201 (72.64%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ     SP LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG+T++FG W+A+ +PFC +G  + W  +  V+ P+D   IP IV+ +   +S  +V ++ +TL+TIF W++   T   FGD+GII+++F+ + FG+G+LS+
Sbjct:  351 KCQIELYIAAFLQRRFKKSPNLFLLAIMLMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTNSTYVKTLLIGLAFACNLGGMMTPISSLQNTLAVSFLEKAGYTVTFGQWMAIAVPFCTVGTILCWAFLLWVMEPSDATYIPQIVYDQKQTISSLHVVVVSMTLMTIFLWASFSVTSASFGDLGIISMMFMFIMFGTGMLSQ 551
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: A0A8K1CGA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGA9_PYTOL)

HSP 1 Score: 216 bits (551), Expect = 7.270e-63
Identity = 108/201 (53.73%), Postives = 142/201 (70.65%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ     SP LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE  G+ ISFG W+A+ +PFC +   + W+ +  V NP D   IP IV+ +   +S  ++ +I LTLLTI  W+T   T   FGD+GII+L+F+ V FG+G+LS+
Sbjct:  373 KCQIELYIAAFLQRRFKKSPNLFLLAIMMMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTNSMYVKTLLIGLAFACNLGGMMTPISSLQNTLAVSYLEKHGYIISFGQWMALAVPFCTISTILCWLFLLWVFNPQDAKYIPQIVYDQKQKISSLHIAVISLTLLTIGLWATFSVTSMTFGDLGIISLMFMFVMFGTGMLSQ 573
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: A0A024G9K9_9STRA (SPX domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9K9_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.820e-62
Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ      P LF+L IM +GLFLS  ISNHTAPVLCVS+L+PIIRDF   S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG++ISFG W+A+ +PFC     + W  +  V +P D   IP IV+ +   +SR +V +I LTLLTI  W+T   T   FGD+GII+L+F+ V FG+GILS+
Sbjct:  397 KCQIELYIAAALQRRFKKRPNLFLLAIMLMGLFLSMWISNHTAPVLCVSVLLPIIRDFPTSSAYVKTLLVGLAFACNLGGMMTPISSLQNTLAVSYLEKAGYSISFGQWMAMAVPFCTFTTILCWAFLLWVFDPKDAKCIPQIVYDQKQHISRVHVTVIALTLLTILLWATFTFTSPTFGDLGIISLIFMFVMFGTGILSQ 597
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Match: H3GS72_PHYRM (SPX domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3GS72_PHYRM)

HSP 1 Score: 214 bits (544), Expect = 2.590e-62
Identity = 108/212 (50.94%), Postives = 147/212 (69.34%), Query Frame = 1 
Query:    1 RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVS-----------ILMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENAGFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDVVSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILSE 603
            +C+IEL IAA LQ      P LF+L IM +GLFLS  ISNHTAPVLCVS           +L+PIIRDF  +S + K LL+GLAFACN GGM+TPISS+QN +A   LE AG+T++FG W+A+ +PFC +G  + W+ +  V++P D   IP IV+ +   +SR +V +I LTLLTIF W++   T   FGD+GII+++F+ V FG+G+LS+
Sbjct:  347 KCQIELYIAAFLQRRFKKRPNLFLLAIMLMGLFLSMWISNHTAPVLCVSFQLDRGFSHFKVLLPIIRDFPTNSTYVKTLLIGLAFACNLGGMMTPISSLQNTLAVSFLEKAGYTVTFGQWMAMAVPFCTVGTILCWLFLLWVMDPQDATYIPQIVYDQKQKISRLHVVVISLTLLTIFLWASFSVTSATFGDLGIISMMFMFVMFGTGMLSQ 558
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13539.2633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM08_ECTSI6.940e-12195.52SPX domain-containing protein (Fragment) n=2 Tax=E... [more]
A0A3R7K7S0_9STRA8.740e-6654.73SPX domain-containing protein n=3 Tax=Phytophthora... [more]
A0A3M6VJ86_9STRA1.580e-6553.73SPX domain-containing protein n=2 Tax=Peronospora ... [more]
F0WBX4_9STRA4.610e-6555.22Divalent anion:Na symporter (DASS) family protein ... [more]
A0A5D6XQQ2_9STRA9.070e-6554.73SPX domain-containing protein n=1 Tax=Pythium bras... [more]
K3WUL6_GLOUD9.530e-6554.73SPX domain-containing protein n=1 Tax=Globisporang... [more]
A0A484DYF7_BRELC1.360e-6451.74SPX domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A8K1CGA9_PYTOL7.270e-6353.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024G9K9_9STRA1.820e-6254.73SPX domain-containing protein n=1 Tax=Albugo candi... [more]
H3GS72_PHYRM2.590e-6250.94SPX domain-containing protein n=25 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13539contigE-fasciculatus_F_contig13539:367..2810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.9
Seed ortholog evalue9.7e-101
Seed eggNOG ortholog2880.D8LM08
Preferred namePHO91
KEGG rclassRC00210,RC00700,RC02868
KEGG koko:K01694,ko:K14430,ko:K20183
KEGG TC2.A.47.2
KEGG ReactionR02722
KEGG Pathwayko00260,ko00400,ko01100,ko01110,ko01130,ko01230,ko04138,map00260,map00400,map01100,map01110,map01130,map01230,map04138
KEGG ModuleM00023
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006082,GO:0006793,GO:0006797,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009987,GO:0010966,GO:0015075,GO:0015169,GO:0015291,GO:0015318,GO:0015605,GO:0015698,GO:0015711,GO:0015748,GO:0015794,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0032879,GO:0034220,GO:0034762,GO:0034765,GO:0035435,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043436,GO:0044070,GO:0044232,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0051049,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0071702,GO:0071704,GO:0071944,GO:0097080,GO:0098588,GO:0098656,GO:0098660,GO:0098661,GO:0098805,GO:0098852,GO:1901264,GO:1901505,GO:1903795,GO:1903959,GO:1990816,GO:2000185
EggNOG free text desc.succinate transmembrane transporter activity
EggNOG OGsCOG0471@1,KOG1281@2759
EC4.2.1.20
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko04131
Hectar predicted targeting categorysignal anchor
Exons4
Model size603
Cds size603
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13539.2633.1prot_E-fasciculatus_F_contig13539.2633.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13539 367..2810 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927851.2187052-CDS-E-fasciculatus_F_contig13539:366..6751622927851.2187052-CDS-E-fasciculatus_F_contig13539:366..675Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 367..675 -
1695995722.8329146-CDS-E-fasciculatus_F_contig13539:366..6751695995722.8329146-CDS-E-fasciculatus_F_contig13539:366..675Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 367..675 -
1622927851.2366424-CDS-E-fasciculatus_F_contig13539:1113..12191622927851.2366424-CDS-E-fasciculatus_F_contig13539:1113..1219Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 1114..1219 -
1695995722.846927-CDS-E-fasciculatus_F_contig13539:1113..12191695995722.846927-CDS-E-fasciculatus_F_contig13539:1113..1219Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 1114..1219 -
1622927851.253157-CDS-E-fasciculatus_F_contig13539:1901..19981622927851.253157-CDS-E-fasciculatus_F_contig13539:1901..1998Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 1902..1998 -
1695995722.8567145-CDS-E-fasciculatus_F_contig13539:1901..19981695995722.8567145-CDS-E-fasciculatus_F_contig13539:1901..1998Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 1902..1998 -
1622927851.2734776-CDS-E-fasciculatus_F_contig13539:2719..28101622927851.2734776-CDS-E-fasciculatus_F_contig13539:2719..2810Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 2720..2810 -
1695995722.865833-CDS-E-fasciculatus_F_contig13539:2719..28101695995722.865833-CDS-E-fasciculatus_F_contig13539:2719..2810Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13539 2720..2810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13539.2633.1

>prot_E-fasciculatus_F_contig13539.2633.1 ID=prot_E-fasciculatus_F_contig13539.2633.1|Name=mRNA_E-fasciculatus_F_contig13539.2633.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp
RCEIELRIAALLQAHLGGSPRLFILGIMYLGLFLSTLISNHTAPVLCVSI
LMPIIRDFDVDSKFAKALLLGLAFACNFGGMVTPISSMQNVVAQQALENA
GFTISFGTWVAVGIPFCVLGVFIAWVVVCVVVNPNDVDNIPMIVHSRGDV
VSRKNVFIICLTLLTIFGWSTIGETEQFFGDVGIIALLFIIVAFGSGILS
E
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mRNA from alignment at E-fasciculatus_F_contig13539:367..2810-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13539.2633.1 ID=mRNA_E-fasciculatus_F_contig13539.2633.1|Name=mRNA_E-fasciculatus_F_contig13539.2633.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2444bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13539:367..2810- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTGCGAAATCGAGCTGCGGATCGCGGCGCTGCTGCAGGCTCACCTCGG
GGGCAGCCCTCGTCTCTTCATCCTCGGCATCATGTACCTCGGTGAGATTG
GGCTACTGTAATGCCACATATAAGATGAGGTTGTTATGCAAGCAAAGCGC
AACAGGGACGGGCGACAACCAACAACTAGCACGCCCGATCGATACCGCTT
TCAACAACAAAAAATCGTGACTCTACTGCTGCTGTAGAACTGACGGCCTG
ACGCAGAAGTGTTGTGAGGCAGCGGTGACGCTGGGTGAGCACGCGTTCTT
TGTCCAACGGCTTGTTAAGCTCCAAAAACCCACGTCGCGGGACTCACGTG
CGGCTACTTGCACCCCTCCCCCCTCGCGCGCGCCTCCTTTGCACCAATGT
TAGTGTAGGCTTGTGCCGCTTTGTTTGGTGTAGTACGTGTGCTGCAAGTA
CGTGTGTGTGCGTTTGCCCTTACCGTTGTTGCCCTGACGCTTGCTGAAGC
CATTCCTGAACGATCTATTTTAGCTCTCTCCCCCCCGTCGGCGTTCCGTC
CCCTTCCAGCTTTGTTTGTGTATTTCTCTATATATGTATCTATTTCCCCC
CGTCTCCCCATCTTTCTGCACGTATCCCTGCCCTTTCCACATTGAAACGC
ACCCCTCCCTCTCTCTCCCTCCCTCCCTTCCTTCCTCCCTCCCCTCCTCC
CTCCCTCCCACCTGTCCCTTTGCCCCGTCCCTTCCTTCCCCCCCTCGCTC
CCTGCCTCGGCAACGCCACACCTTGAACGCCCGAACGCCACACACAACAA
AAAAACAAACAGGACTGTTTCTCTCCACGCTGATCAGCAACCACACGGCC
CCAGTCCTGTGCGTGTCGATCTTGATGCCCATCATCCGAGACTTCGATGT
AGACAGCAAGTGAGTCATGTTAACGCCGGCAGAGGTTAGAGCGGGGTGCC
GGGTGGGACTGTGGGGGAAGGTTCAGTGTTCCTGCACGTGCTATGTGGGC
CTTCCTATTGTTGTTTCTGTCATAATCCCGGATTACTTCTCCGGTCATTC
TTCAAAGTGGTGTCCACCCACCACCGCACTACGGTCTTGCCTTTGGGTTG
TCTCTAGGAGTGAGTTGAGTAATGGCCTGGATTTACAACGAACAAGTCCT
CTACGGCTCGGCTCTTCGGCTTTGTCGTATGGATGGGTAGAAGGGTGGGA
GTGAATGGGGAGGGGAAGGTTCCGTGATCTGGGGGTCTGTTTTGGACTGT
GCGGTTTCCGGCAACCCGAGTGAAACGGCGCAGAGAGAGACATGTTCCGT
TTTGCTGTTTGTGTTTTTTTGTGCAAGAATTAGGATTGTGCGCGATAAGT
GCGACCGACAGGCCGCCAAGGACCAGCAGACCACAGAAGTAACGGACGGT
AAACTGTTCGGTGTCGGCGCTCCTGACCCGTTCTCCTGAGCGCTGATATG
GCGTCCGCGATGCGTGGGGTAGGAACGACGCGGTTGCTGTTTGTATTTTT
TCCAATGTTTGCAGATGACTACGGTCAAGCGTTCGCCATGCCTGGGGCAA
ACTTCTCTCTCTTCCTCTCTTATTTCGTGCCGTGCCTGCAGGTTTGCCAA
GGCACTGCTGCTGGGGCTAGCGTTCGCGTGCAACTTCGGCGGCATGGTAA
CTCCGATCTCTTCCATGCAGAACGTGGTGGCCCAGCAGGCGCTCGAGGTC
CGATTCGTCAGTCCTGTGCTGTTGTTAGGTGTCACCTCTTCCTCTTTGGT
GGTTTGGTATGTGCACAGAGGAGGAGACACGCTCGCGCGCTGGTGTGTAG
AGTGGTCGAGCTTTCGCGTTGAGCGCGAGTTGCTTCTCTTGGTCTAGGTT
GGTTGGCTTCGGCAGCCCGGCAGCAGCCTTTGGTTACCCTCCCAACCACC
CACAGCACTGCGGCTGTAAACTGCGGAAGAGCAACGGAAGAGGTAGAGTA
AGCCGTGGTAGGCACTTTTGTACCCTCGTGCCTTCTCGCTGCTAGCCATC
TCGACTCCCCCCGATTGCACCGTCCCCTCGAGGACGTGCGGTCAATGGTC
TAAGAACTAACGCATGCAACGCATGAGTATGCCCCTCCCCCCAAATTCTC
AAACGTACTGCATACACCCCCCCCCCCCCGAACAGAACGCCGGGTTCACG
ATATCCTTCGGCACCTGGGTCGCCGTGGGCATCCCGTTCTGCGTCCTCGG
CGTGTTCATCGCGTGGGTGGTGGTGTGCGTCGTGGTGAACCCGAACGACG
TGGACAACATCCCGATGATCGTGCACTCCCGGGGAGACGTGGTCTCGCGG
AAGAACGTCTTCATCATATGCCTCACCCTGCTGACGATCTTCGGGTGGAG
CACTATCGGGGAGACGGAGCAGTTCTTCGGCGACGTCGGAATCATCGCGC
TCCTCTTCATCATTGTCGCCTTCGGCTCCGGCATCCTGAGCGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13539:367..2810-

>mRNA_E-fasciculatus_F_contig13539.2633.1 ID=mRNA_E-fasciculatus_F_contig13539.2633.1|Name=mRNA_E-fasciculatus_F_contig13539.2633.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13539:367..2810- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTGCGAAATCGAGCTGCGGATCGCGGCGCTGCTGCAGGCTCACCTCGG
GGGCAGCCCTCGTCTCTTCATCCTCGGCATCATGTACCTCGAGGTGCGAA
ATCGAGCTGCGGATCGCGGCGCTGCTGCAGGCTCACCTCGGGGGCAGCCC
TCGTCTCTTCATCCTCGGCATCATGTACCTCGGACTGTTTCTCTCCACGC
TGATCAGCAACCACACGGCCCCAGTCCTGTGCGTGTCGATCTTGATGCCC
ATCATCCGAGACTTCGATGTAGACAGCAAGACTGTTTCTCTCCACGCTGA
TCAGCAACCACACGGCCCCAGTCCTGTGCGTGTCGATCTTGATGCCCATC
ATCCGAGACTTCGATGTAGACAGCAAGTTTGCCAAGGCACTGCTGCTGGG
GCTAGCGTTCGCGTGCAACTTCGGCGGCATGGTAACTCCGATCTCTTCCA
TGCAGAACGTGGTGGCCCAGCAGGCGCTCGAGGTTTGCCAAGGCACTGCT
GCTGGGGCTAGCGTTCGCGTGCAACTTCGGCGGCATGGTAACTCCGATCT
CTTCCATGCAGAACGTGGTGGCCCAGCAGGCGCTCGAGAACGCCGGGTTC
ACGATATCCTTCGGCACCTGGGTCGCCGTGGGCATCCCGTTCTGCGTCCT
CGGCGTGTTCATCGCGTGGGTGGTGGTGTGCGTCGTGGTGAACCCGAACG
ACGTGGACAACATCCCGATGATCGTGCACTCCCGGGGAGACGTGGTCTCG
CGGAAGAACGTCTTCATCATATGCCTCACCCTGCTGACGATCTTCGGGTG
GAGCACTATCGGGGAGACGGAGCAGTTCTTCGGCGACGTCGGAATCATCG
CGCTCCTCTTCATCATTGTCGCCTTCGGCTCCGGCATCCTGAGCGAGAAC
GCCGGGTTCACGATATCCTTCGGCACCTGGGTCGCCGTGGGCATCCCGTT
CTGCGTCCTCGGCGTGTTCATCGCGTGGGTGGTGGTGTGCGTCGTGGTGA
ACCCGAACGACGTGGACAACATCCCGATGATCGTGCACTCCCGGGGAGAC
GTGGTCTCGCGGAAGAACGTCTTCATCATATGCCTCACCCTGCTGACGAT
CTTCGGGTGGAGCACTATCGGGGAGACGGAGCAGTTCTTCGGCGACGTCG
GAATCATCGCGCTCCTCTTCATCATTGTCGCCTTCGGCTCCGGCATCCTG
AGCGAG
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