mRNA_E-fasciculatus_F_contig13526.2626.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13526.2626.1
Unique NamemRNA_E-fasciculatus_F_contig13526.2626.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: D7G5L2_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L2_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 8.750e-118
Identity = 183/202 (90.59%), Postives = 187/202 (92.57%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQV-VDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPVSRKGEPEKKLCFEARSWKAC+QETVELKLVFRQQDN+FVKLLSKVRWGQCTPEVLAKLRSCAENS T A G           VDDGIEKTQLLTHKADVL+VNEERLGRLDGAEVVSKAENRGNRPD LRQLDDSCSAPATLRLKVGAQV+LVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR
Sbjct:  130 QLPPVSRKGEPEKKLCFEARSWKACVQETVELKLVFRQQDNSFVKLLSKVRWGQCTPEVLAKLRSCAENSITNANGXXXXXXXXXXXVDDGIEKTQLLTHKADVLKVNEERLGRLDGAEVVSKAENRGNRPDILRQLDDSCSAPATLRLKVGAQVMLVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 331          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A5A8CRH1_CAFRO (ATP-dependent DNA helicase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRH1_CAFRO)

HSP 1 Score: 151 bits (381), Expect = 1.220e-39
Identity = 93/202 (46.04%), Postives = 116/202 (57.43%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKL--RSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVI 600
            QLPPVS+ G   K   FEA  W  C+   VEL  VFRQ D +FV +L+ +RWG  TP   A L  R  A+ +   A GG             I  T L TH+ADV  VNE+ L RL G EVV + ++  + P   R L+ +C APA+LRL+VGAQV+LV+NL  G GL NG+RGVV+ F    S   R P VRFASG   V+
Sbjct:  223 QLPPVSKGGAARKPYAFEAACWGKCVSVEVELTRVFRQADRDFVDVLNAIRWGVVTPAARAALDARWGADVAIAGADGGPA-----------IRPTLLFTHRADVDAVNEKELARLRGDEVVLRGDDTAHSPGARRALESACPAPASLRLRVGAQVMLVRNLDVGAGLVNGARGVVLGF----SGTLRYPQVRFASGTVTVL 409          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A5A8EBC3_CAFRO (ATP-dependent DNA helicase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBC3_CAFRO)

HSP 1 Score: 151 bits (381), Expect = 5.350e-39
Identity = 91/200 (45.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVI 600
            QLPPVS+ G   K   FEA  W  C+   VEL  VFRQ D +FV +L+ +RWG  TP   A L +        A   GG           I  T L TH+ADV  VNE+ L RL G EVV + ++  + P   R L+ +C APA+LRL+VGAQV+LV+NL  G GL NG+RGVV+ F    S   R P VRFASG   V+
Sbjct:  361 QLPPVSKGGAARKPYAFEAACWGKCVSVEVELTRVFRQADRDFVDVLNAIRWGVVTPAARAALDARWGADVVIAGADGGP---------AIRPTLLFTHRADVDAVNEKELARLRGDEVVLRGDDTAHSPGARRALESACPAPASLRLRVGAQVMLVRNLDVGAGLVNGARGVVLGF----SGTLRYPQVRFASGTVTVL 547          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A8C5KW85_JACJA (ATP-dependent DNA helicase PIF1 n=1 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5KW85_JACJA)

HSP 1 Score: 149 bits (376), Expect = 5.810e-39
Identity = 90/201 (44.78%), Postives = 117/201 (58.21%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++   P +  CF+A+SW+ C+  TVEL  V+RQ D +F+ LL  VR G+C+ EV  +LR+ A +   +               DGIE T+L TH+ DV   NE+RL  L G   V   E   + P+  R LD  C     L+LK+GAQV+LVKNLA  RGL NG+RGVVV F    + G  LP VRF  G+ EVIR
Sbjct:  225 QLPPVTKGSRPPR-FCFQAKSWRRCVPVTVELTEVWRQADQSFISLLQAVRLGRCSDEVTRQLRATAAHKVGR---------------DGIEATRLCTHQDDVALTNEKRLRELPGE--VHSFEAMDSHPELARTLDAQCPVSRHLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFQ---AEGRGLPQVRFLCGVTEVIR 404          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: UPI001E1B279C (ATP-dependent DNA helicase PIF1 n=2 Tax=Euarchontoglires TaxID=314146 RepID=UPI001E1B279C)

HSP 1 Score: 149 bits (376), Expect = 2.190e-38
Identity = 90/201 (44.78%), Postives = 117/201 (58.21%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++   P +  CF+A+SW+ C+  TVEL  V+RQ D +F+ LL  VR G+C+ EV  +LR+ A +   +               DGIE T+L TH+ DV   NE+RL  L G   V   E   + P+  R LD  C     L+LK+GAQV+LVKNLA  RGL NG+RGVVV F    + G  LP VRF  G+ EVIR
Sbjct:  358 QLPPVTKGSRPPR-FCFQAKSWRRCVPVTVELTEVWRQADQSFISLLQAVRLGRCSDEVTRQLRATAAHKVGR---------------DGIEATRLCTHQDDVALTNEKRLRELPGE--VHSFEAMDSHPELARTLDAQCPVSRHLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFQ---AEGRGLPQVRFLCGVTEVIR 537          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: M3XN93_MUSPF (ATP-dependent DNA helicase PIF1 n=9 Tax=Mustelidae TaxID=9655 RepID=M3XN93_MUSPF)

HSP 1 Score: 147 bits (370), Expect = 1.940e-37
Identity = 88/201 (43.78%), Postives = 116/201 (57.71%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++  +P K  CF+A+SW+ C+  T+EL  V+RQ D NF+ LL  VR G+C+ EV  +L++ A +   +               DGI  T+L TH+ DV   NE RL  L G     KA +    P+  R LD  C     L+LK+GAQV+LVKNLA  RGL NG+RGVV+ F    + G  LP VRF  G+ EVIR
Sbjct:  403 QLPPVTKGSQPPK-FCFQAKSWRRCVPVTLELTEVWRQADQNFISLLQAVRLGRCSDEVTRQLQATASHKVGR---------------DGIVATRLCTHQDDVALTNERRLQELPGEMHTFKAMDSD--PEQARSLDAQCPVSQILQLKLGAQVMLVKNLAVSRGLVNGARGVVIGFE---TEGRGLPQVRFLCGVTEVIR 582          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A8C2VKX3_CHILA (ATP-dependent DNA helicase PIF1 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2VKX3_CHILA)

HSP 1 Score: 144 bits (364), Expect = 3.210e-37
Identity = 88/201 (43.78%), Postives = 116/201 (57.71%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++  +P +  CF+A+SW+ C+  T+EL  V+RQ D  FV LL  VR G+C+ EV  +LR+ A +   +               DG+  T+L TH+ DV+  NE RL  L G   V   E   + P+  R LD  C     L+LK+GAQV+LVKNLA  RGL NG+RGVVV F    + G  LP VRF  G+ EVIR
Sbjct:  231 QLPPVTKGSQPPR-FCFQAKSWRRCVPVTLELTEVWRQADPAFVSLLQAVRLGRCSDEVTRQLRATAAHKVGR---------------DGVVATRLCTHQDDVVLTNERRLQELPGE--VHSFEALDSHPELARALDAQCPVSRLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIR 410          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A643C7B0_BALPH (ATP-dependent DNA helicase (Fragment) n=1 Tax=Balaenoptera physalus TaxID=9770 RepID=A0A643C7B0_BALPH)

HSP 1 Score: 143 bits (360), Expect = 4.110e-37
Identity = 87/201 (43.28%), Postives = 116/201 (57.71%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++  +P +  CF+A+SW+ C+  T+EL  V+RQ D  F+ LL  VR G+C+ EV  +LR+ A +   +               DGI  T+L TH+ DV   NE +L +L G   V   E   + P+  R LD  C     L+LK+GAQV+LVKNLA  RGL NG+RGVVV F    + G  LP VRF  G+ EVIR
Sbjct:  180 QLPPVTKGSQPPQ-FCFQAKSWRRCVPVTLELTEVWRQTDETFISLLQAVRLGRCSDEVTRQLRATAAHRVGR---------------DGIVATRLCTHQDDVALTNERQLQKLPGE--VHSFEAMDSDPEQARTLDAQCPVNQLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIR 359          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: F7ET02_MONDO (ATP-dependent DNA helicase PIF1 n=7 Tax=Metatheria TaxID=9263 RepID=F7ET02_MONDO)

HSP 1 Score: 145 bits (365), Expect = 6.540e-37
Identity = 87/201 (43.28%), Postives = 117/201 (58.21%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++  +P +  CF+A+SW+ CIQ T+EL  V+RQ D  F+ LL  VR G+C+ EV  KL++ A +   +               DGI  T+L TH+ DV   NE RL +L G   V   E   + P  +R LD  C     L+LK+GAQV+LVKNLA  +GL NG+RGVVV F    + G  LP V+F  G+ EV+R
Sbjct:  343 QLPPVTKNNQPPQ-FCFQAKSWRKCIQLTMELTEVWRQTDPTFISLLQAVRLGRCSDEVTQKLKATARHKVER---------------DGILATRLCTHQDDVALTNERRLQQLPGQ--VHSYEAVDSDPTMVRTLDSQCPVSHLLQLKLGAQVMLVKNLAVSQGLVNGARGVVVGFE---ADGRGLPTVKFLCGVTEVVR 522          
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A3Q2HK39_HORSE (ATP-dependent DNA helicase PIF1 n=13 Tax=Laurasiatheria TaxID=314145 RepID=A0A3Q2HK39_HORSE)

HSP 1 Score: 145 bits (365), Expect = 7.280e-37
Identity = 89/201 (44.28%), Postives = 115/201 (57.21%), Query Frame = 1
Query:    1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
            QLPPV++  +P +  CF+A+SW+ C+  T+EL  V+RQ D  FV LL  VR G+C+ EV  +LR+ A +   +               DGI  T+L TH+ DV   NE RL  L G   V   E   + P+  R LD  C     L+LK+GAQV+LVKNLA  RGL NG+RGVVV F    + G  LP VRF  G+ EVIR
Sbjct:  346 QLPPVTKGSQPPQ-FCFQAKSWRRCVPVTLELTEVWRQADQTFVSLLQAVRLGRCSDEVTRQLRATATHKVGR---------------DGIVATRLCTHQDDVALTNERRLQELPGE--VHSFEAMDSDPEQARTLDAQCPVSQLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIR 525          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5L2_ECTSI8.750e-11890.59ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A5A8CRH1_CAFRO1.220e-3946.04ATP-dependent DNA helicase n=2 Tax=Cafeteria roenb... [more]
A0A5A8EBC3_CAFRO5.350e-3945.50ATP-dependent DNA helicase n=2 Tax=Cafeteria roenb... [more]
A0A8C5KW85_JACJA5.810e-3944.78ATP-dependent DNA helicase PIF1 n=1 Tax=Jaculus ja... [more]
UPI001E1B279C2.190e-3844.78ATP-dependent DNA helicase PIF1 n=2 Tax=Euarchonto... [more]
M3XN93_MUSPF1.940e-3743.78ATP-dependent DNA helicase PIF1 n=9 Tax=Mustelidae... [more]
A0A8C2VKX3_CHILA3.210e-3743.78ATP-dependent DNA helicase PIF1 n=2 Tax=Chinchilla... [more]
A0A643C7B0_BALPH4.110e-3743.28ATP-dependent DNA helicase (Fragment) n=1 Tax=Bala... [more]
F7ET02_MONDO6.540e-3743.28ATP-dependent DNA helicase PIF1 n=7 Tax=Metatheria... [more]
A0A3Q2HK39_HORSE7.280e-3744.28ATP-dependent DNA helicase PIF1 n=13 Tax=Laurasiat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13526contigE-fasciculatus_F_contig13526:393..3583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.8
Seed ortholog evalue2.7e-95
Seed eggNOG ortholog2880.D7G5L2
KEGG koko:K15255
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA helicase
Ec32 orthologEc-16_002340.1
Exons5
Model size606
Cds size606
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13526.2626.1prot_E-fasciculatus_F_contig13526.2626.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13526 393..3583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927850.4475572-CDS-E-fasciculatus_F_contig13526:392..5391622927850.4475572-CDS-E-fasciculatus_F_contig13526:392..539Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 393..539 -
1695995722.443405-CDS-E-fasciculatus_F_contig13526:392..5391695995722.443405-CDS-E-fasciculatus_F_contig13526:392..539Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 393..539 -
1622927850.4657533-CDS-E-fasciculatus_F_contig13526:1228..13601622927850.4657533-CDS-E-fasciculatus_F_contig13526:1228..1360Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 1229..1360 -
1695995722.4578462-CDS-E-fasciculatus_F_contig13526:1228..13601695995722.4578462-CDS-E-fasciculatus_F_contig13526:1228..1360Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 1229..1360 -
1622927850.478418-CDS-E-fasciculatus_F_contig13526:2285..24771622927850.478418-CDS-E-fasciculatus_F_contig13526:2285..2477Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 2286..2477 -
1695995722.4675472-CDS-E-fasciculatus_F_contig13526:2285..24771695995722.4675472-CDS-E-fasciculatus_F_contig13526:2285..2477Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 2286..2477 -
1622927850.489826-CDS-E-fasciculatus_F_contig13526:3143..31971622927850.489826-CDS-E-fasciculatus_F_contig13526:3143..3197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 3144..3197 -
1695995722.479279-CDS-E-fasciculatus_F_contig13526:3143..31971695995722.479279-CDS-E-fasciculatus_F_contig13526:3143..3197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 3144..3197 -
1622927850.505824-CDS-E-fasciculatus_F_contig13526:3502..35831622927850.505824-CDS-E-fasciculatus_F_contig13526:3502..3583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 3503..3583 -
1695995722.4890337-CDS-E-fasciculatus_F_contig13526:3502..35831695995722.4890337-CDS-E-fasciculatus_F_contig13526:3502..3583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13526 3503..3583 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13526.2626.1

>prot_E-fasciculatus_F_contig13526.2626.1 ID=prot_E-fasciculatus_F_contig13526.2626.1|Name=mRNA_E-fasciculatus_F_contig13526.2626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=202bp
QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKV
RWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHK
ADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKV
GAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVI
R*
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mRNA from alignment at E-fasciculatus_F_contig13526:393..3583-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13526.2626.1 ID=mRNA_E-fasciculatus_F_contig13526.2626.1|Name=mRNA_E-fasciculatus_F_contig13526.2626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3191bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13526:393..3583- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTACCGCCGGTGTCTCGCAAGGGGGAGCCGGAGAAGAAGCTTTGCTT CGAGGCCAGGTCGTGGAAGGCGTGCATCCAGGTACGGGAACCTAAAAAAA TGGGGATGCCTACGGAAACATAGTAAGGTTACTACCAAGAGACCAAGCAG TGTGGAACTGCTCCTGCTGCTACTGGTTGCGTGCTGCTGTCGAGATGGAG CAAGCGCGATTTGCCGAAGCAACGGTTGGCTGCTCTCCCGATGGCTGCAC TCCCACGTGTATCCCCCCCCCATGCAAGTTACCGCCTCACCTGCAACGGC CGCTCTCCGGTCAATCGCTTACAGGAGATCTTTTTACTAGACCGCTCTTC TCTTGCTTTACTCTTTCTACTTCGCGGTGCGTGCAGGAGACGGTGGAACT GAAGCTGGTCTTCCGGCAGCAGGATAACAATTTCGTGAAGGTAAGAAGAG GCCGGCGCTGATTTGAAGTGAAAAAAGAAAAAAAAAAAGAGGCCCAACAA GCCGTGGAAATCGCGCACGGACCTTTCCCTGTGCCACTCAGCCATGCCCA TGCCCGCGTAGACAGCAGTACACGCAAGGAACCGTTATTTTCCCGATGTC GGGTGAAGGCGAGATGGCATCTGAGAATTGTGTCGCCGAGCTAGGCGACG TTAAACGTTGTTGCGGACAGAACACGGGGCTGGTATATACCACGCATCGC AAGAAAAAACGTTACGGTAGACGAAGCACACGCTCGATGCGTTTTCATGC TCTCATTGGGGCTGATATAACCGCCTTCCCAGCAGTTGCCGATTCTGAGT CCGATTACGGTACGGAGACCAAACGCTTCGGCGGTGACGATCGAAGCGAA GCAGCCCACGATGATGACGGTCTTCAGACATACCTTTTTCATCGCCCTCT GTTACCTTTCCACGTGGTCGTGCCTAGTGCTGCTAGTGTCTGTCTGTCCA TCGTCACTGCTCGATGTCCGTTGTTTCTGTAGATGTCGTTATTTTTACCC TGCCGTCGTTATAGCCGCTGTTCATCATCCCGAATGTAGGTACGTCGTTC ATCATTTTATTGAAAGAAAAGACTACGCTAACATTGCTCTCGTCCCATCC TGCCAGCTCCTCAGCAAGGTTCGGTGGGGCCAGTGCACGCCGGAGGTGCT GGCAAAGCTACGTAGCTGCGCCGAGAACAGCACCACCAAGGCCACGGGCG GCGGCGGGGAAGAGTCGTCCCCCCAAGTCGTCGACGACGGCATCGAGAAG ACGCAGCTGCTTACCCACAAGGCGGACGTCCTGAGGGTTAACGAGGAGGT CAGCAGCTTAGCTTAGCCCTAGTCCATGTACCCTCTTGCCCGCGACAACG CTAACGTTAGCCTCAGCCCTAGCTACGTCGCCCGTTGAATCCAAAGTCAA AGGTGCTGTTCTTAGCCCTAGCTAGGTGGCCCGCGAGCCGAAAGTTGAGT TGCCGTGGACCCAGCGAGACAGGGGGAGTCGCGAAGATCACTTTCTGAGT TTAACGAGGGAGTTCGGCCCTGTTCCTGTCAGCACTCGTGTGCTTCAAGA CGCCTGGTTTGCTGGCTCCTCATAGGCCAAAATAATCGTGGGATCTGATG AAGGAGGAGGAGGACGACGAAAAGAAGGCTGACACCAGCCCTTGAGTTCA ATACTTTCTAGTTTAGGAGTGCTGGCGGTACCTGGGAGGCGGTGGCCAGG ATGGCGCTCATGTACTGGACTTTCACGTAGAAGCCATTCTTAGAGATCAA TCGTGCCTGCTGAGCCTGTGTGTGTGCTCGTCCGGGCTATACCGCTATCC GAACGGCGTACATCTGTTTCCTTTCCTAGCCTGCGGCAAGTGCGGCGAGG GAAGATCCTTCCTCCCTTGGCTGCCGGTAAGGGGCGTGCTTGGTCTGAAA ATTGATTCTGAGACCCCGCAACCGAACAACGCGGACTGTTTTTATCATCG CGCGCGCTCTGGCGAAAGATGCTACTATGTACCTTTCAGTACGCTCATAA TAAGCAGCCTCTCAGCGGTGCCTTTTGGACAAGGCAAGATGACCCGGGAG TTGGGTGGAGGCGGTGTCAAGTTTTTTTTTACCCTGCCCGGCAAGAGCTC GAATGGCAGTTCATCGTGATGTGCATGTAGATTCTCAAATTCCTTTGTAG CGCAACACCCTTGCTGATAAAGAACTGTCTCAGTGGCGTCTCGATTAATT GTTCGGGTTCGATTCATTCGCAGCGGTTAGGCCGCCTGGACGGGGCAGAG GTCGTGTCGAAGGCCGAGAACAGAGGAAACAGGCCGGACTACCTGAGGCA GCTGGACGACTCTTGCTCCGCCCCGGCTACGCTGAGGCTCAAGGTCGGCG CACAGGTTAGTGGCGGTGTGATGTATCGGTTAATGTTGGGGCTGGGGCTA TGCTTGATTCCTGCTGGGTTAGTCGTGCATACCTCTGGCCACGGCCATGG CGCAGGGCCACAGAATCTACTTGTGTAGGGTATGATGCAGAAGATATGTT CATGGACTAAACAATAAACTCCGGAGCACTCAACTACGTCAGGAAAAAAC TCAGGCGAGGTATCCCATACACCCTTCACACGTTACTCGAAAGTAGGAAG TGTTATTTCTTCGACCACTTCTCCGCCAGGTGCCGAAAAGGCCTCGAGTT GCGACCAAACCCCGGTGCGGTCGTTGAGAACCATTTCGCTCTATGCTTTA TTTATTTTTTGCTTCACACCACCTCCTGTCGCCTAAAAGCACACTCCCCG GCAGAAATCCAGTGCGTCAATCGCTTGTCTCTTGCAGCCAAGTGCCCCCC CGTGCGTTGTCCGACCAACACAATGTGAAACCAAATTATAAAATCACTGC GGTTTCGCCAAATACACCACGGCGATGGACGTACGCCACGTGCACTCTTC ACCATGCACTGAAACACACACACACACACACGAGATCACAAGTGTTCGCG TTTTGATTACCCCGCTACATATTATATTGGTCAGCCAGCTGCCTATCGTG GTACGTTCGATGCCTCCAACAAGAAACACACGAAACGTCGACAGGTGATT CTTGTGAAGAACCTGGCCACCGGCCGCGGGCTGGCCAACGGGTCGAGGGG AGTCGTCGTTCGTTTCGCGAAGTCGACGTCAAGCGGGGCGCGGCTACCCG TCGTTCGGTTCGCTTCCGGTCTGGAGGAGGTTATCCGGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13526:393..3583-

>mRNA_E-fasciculatus_F_contig13526.2626.1 ID=mRNA_E-fasciculatus_F_contig13526.2626.1|Name=mRNA_E-fasciculatus_F_contig13526.2626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1212bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13526:393..3583- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTACCGCCGGTGTCTCGCAAGGGGGAGCCGGAGAAGAAGCTTTGCTT
CGAGGCCAGGTCGTGGAAGGCGTGCATCCAGCAGCTACCGCCGGTGTCTC
GCAAGGGGGAGCCGGAGAAGAAGCTTTGCTTCGAGGCCAGGTCGTGGAAG
GCGTGCATCCAGGAGACGGTGGAACTGAAGCTGGTCTTCCGGCAGCAGGA
TAACAATTTCGTGAAGGAGACGGTGGAACTGAAGCTGGTCTTCCGGCAGC
AGGATAACAATTTCGTGAAGCTCCTCAGCAAGGTTCGGTGGGGCCAGTGC
ACGCCGGAGGTGCTGGCAAAGCTACGTAGCTGCGCCGAGAACAGCACCAC
CAAGGCCACGGGCGGCGGCGGGGAAGAGTCGTCCCCCCAAGTCGTCGACG
ACGGCATCGAGAAGACGCAGCTGCTTACCCACAAGGCGGACGTCCTGAGG
GTTAACGAGGAGCTCCTCAGCAAGGTTCGGTGGGGCCAGTGCACGCCGGA
GGTGCTGGCAAAGCTACGTAGCTGCGCCGAGAACAGCACCACCAAGGCCA
CGGGCGGCGGCGGGGAAGAGTCGTCCCCCCAAGTCGTCGACGACGGCATC
GAGAAGACGCAGCTGCTTACCCACAAGGCGGACGTCCTGAGGGTTAACGA
GGAGCGGTTAGGCCGCCTGGACGGGGCAGAGGTCGTGTCGAAGGCCGAGA
ACAGAGGAAACAGGCCGGACTACCTGAGGCAGCTGGACGACTCTTGCTCC
GCCCCGGCTACGCTGAGGCTCAAGGTCGGCGCACAGCGGTTAGGCCGCCT
GGACGGGGCAGAGGTCGTGTCGAAGGCCGAGAACAGAGGAAACAGGCCGG
ACTACCTGAGGCAGCTGGACGACTCTTGCTCCGCCCCGGCTACGCTGAGG
CTCAAGGTCGGCGCACAGGTGATTCTTGTGAAGAACCTGGCCACCGGCCG
CGGGCTGGCCAACGGGTCGAGGGGAGTCGTCGTTCGTTTCGCGAAGTCGA
CGTCAAGCGGGGCGCGGCTACCCGTCGTTCGGTTCGCTTCCGGTCTGGAG
GAGGTTATCCGGTGAGTGATTCTTGTGAAGAACCTGGCCACCGGCCGCGG
GCTGGCCAACGGGTCGAGGGGAGTCGTCGTTCGTTTCGCGAAGTCGACGT
CAAGCGGGGCGCGGCTACCCGTCGTTCGGTTCGCTTCCGGTCTGGAGGAG
GTTATCCGGTGA
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