mRNA_E-fasciculatus_F_contig13526.2626.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: D7G5L2_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L2_ECTSI) HSP 1 Score: 350 bits (898), Expect = 8.750e-118 Identity = 183/202 (90.59%), Postives = 187/202 (92.57%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQV-VDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPVSRKGEPEKKLCFEARSWKAC+QETVELKLVFRQQDN+FVKLLSKVRWGQCTPEVLAKLRSCAENS T A G VDDGIEKTQLLTHKADVL+VNEERLGRLDGAEVVSKAENRGNRPD LRQLDDSCSAPATLRLKVGAQV+LVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR
Sbjct: 130 QLPPVSRKGEPEKKLCFEARSWKACVQETVELKLVFRQQDNSFVKLLSKVRWGQCTPEVLAKLRSCAENSITNANGXXXXXXXXXXXVDDGIEKTQLLTHKADVLKVNEERLGRLDGAEVVSKAENRGNRPDILRQLDDSCSAPATLRLKVGAQVMLVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 331
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A5A8CRH1_CAFRO (ATP-dependent DNA helicase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRH1_CAFRO) HSP 1 Score: 151 bits (381), Expect = 1.220e-39 Identity = 93/202 (46.04%), Postives = 116/202 (57.43%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKL--RSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVI 600
QLPPVS+ G K FEA W C+ VEL VFRQ D +FV +L+ +RWG TP A L R A+ + A GG I T L TH+ADV VNE+ L RL G EVV + ++ + P R L+ +C APA+LRL+VGAQV+LV+NL G GL NG+RGVV+ F S R P VRFASG V+
Sbjct: 223 QLPPVSKGGAARKPYAFEAACWGKCVSVEVELTRVFRQADRDFVDVLNAIRWGVVTPAARAALDARWGADVAIAGADGGPA-----------IRPTLLFTHRADVDAVNEKELARLRGDEVVLRGDDTAHSPGARRALESACPAPASLRLRVGAQVMLVRNLDVGAGLVNGARGVVLGF----SGTLRYPQVRFASGTVTVL 409
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A5A8EBC3_CAFRO (ATP-dependent DNA helicase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBC3_CAFRO) HSP 1 Score: 151 bits (381), Expect = 5.350e-39 Identity = 91/200 (45.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVI 600
QLPPVS+ G K FEA W C+ VEL VFRQ D +FV +L+ +RWG TP A L + A GG I T L TH+ADV VNE+ L RL G EVV + ++ + P R L+ +C APA+LRL+VGAQV+LV+NL G GL NG+RGVV+ F S R P VRFASG V+
Sbjct: 361 QLPPVSKGGAARKPYAFEAACWGKCVSVEVELTRVFRQADRDFVDVLNAIRWGVVTPAARAALDARWGADVVIAGADGGP---------AIRPTLLFTHRADVDAVNEKELARLRGDEVVLRGDDTAHSPGARRALESACPAPASLRLRVGAQVMLVRNLDVGAGLVNGARGVVLGF----SGTLRYPQVRFASGTVTVL 547
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A8C5KW85_JACJA (ATP-dependent DNA helicase PIF1 n=1 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5KW85_JACJA) HSP 1 Score: 149 bits (376), Expect = 5.810e-39 Identity = 90/201 (44.78%), Postives = 117/201 (58.21%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ P + CF+A+SW+ C+ TVEL V+RQ D +F+ LL VR G+C+ EV +LR+ A + + DGIE T+L TH+ DV NE+RL L G V E + P+ R LD C L+LK+GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EVIR
Sbjct: 225 QLPPVTKGSRPPR-FCFQAKSWRRCVPVTVELTEVWRQADQSFISLLQAVRLGRCSDEVTRQLRATAAHKVGR---------------DGIEATRLCTHQDDVALTNEKRLRELPGE--VHSFEAMDSHPELARTLDAQCPVSRHLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFQ---AEGRGLPQVRFLCGVTEVIR 404
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: UPI001E1B279C (ATP-dependent DNA helicase PIF1 n=2 Tax=Euarchontoglires TaxID=314146 RepID=UPI001E1B279C) HSP 1 Score: 149 bits (376), Expect = 2.190e-38 Identity = 90/201 (44.78%), Postives = 117/201 (58.21%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ P + CF+A+SW+ C+ TVEL V+RQ D +F+ LL VR G+C+ EV +LR+ A + + DGIE T+L TH+ DV NE+RL L G V E + P+ R LD C L+LK+GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EVIR
Sbjct: 358 QLPPVTKGSRPPR-FCFQAKSWRRCVPVTVELTEVWRQADQSFISLLQAVRLGRCSDEVTRQLRATAAHKVGR---------------DGIEATRLCTHQDDVALTNEKRLRELPGE--VHSFEAMDSHPELARTLDAQCPVSRHLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFQ---AEGRGLPQVRFLCGVTEVIR 537
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: M3XN93_MUSPF (ATP-dependent DNA helicase PIF1 n=9 Tax=Mustelidae TaxID=9655 RepID=M3XN93_MUSPF) HSP 1 Score: 147 bits (370), Expect = 1.940e-37 Identity = 88/201 (43.78%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ +P K CF+A+SW+ C+ T+EL V+RQ D NF+ LL VR G+C+ EV +L++ A + + DGI T+L TH+ DV NE RL L G KA + P+ R LD C L+LK+GAQV+LVKNLA RGL NG+RGVV+ F + G LP VRF G+ EVIR
Sbjct: 403 QLPPVTKGSQPPK-FCFQAKSWRRCVPVTLELTEVWRQADQNFISLLQAVRLGRCSDEVTRQLQATASHKVGR---------------DGIVATRLCTHQDDVALTNERRLQELPGEMHTFKAMDSD--PEQARSLDAQCPVSQILQLKLGAQVMLVKNLAVSRGLVNGARGVVIGFE---TEGRGLPQVRFLCGVTEVIR 582
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A8C2VKX3_CHILA (ATP-dependent DNA helicase PIF1 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2VKX3_CHILA) HSP 1 Score: 144 bits (364), Expect = 3.210e-37 Identity = 88/201 (43.78%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ +P + CF+A+SW+ C+ T+EL V+RQ D FV LL VR G+C+ EV +LR+ A + + DG+ T+L TH+ DV+ NE RL L G V E + P+ R LD C L+LK+GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EVIR
Sbjct: 231 QLPPVTKGSQPPR-FCFQAKSWRRCVPVTLELTEVWRQADPAFVSLLQAVRLGRCSDEVTRQLRATAAHKVGR---------------DGVVATRLCTHQDDVVLTNERRLQELPGE--VHSFEALDSHPELARALDAQCPVSRLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIR 410
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A643C7B0_BALPH (ATP-dependent DNA helicase (Fragment) n=1 Tax=Balaenoptera physalus TaxID=9770 RepID=A0A643C7B0_BALPH) HSP 1 Score: 143 bits (360), Expect = 4.110e-37 Identity = 87/201 (43.28%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ +P + CF+A+SW+ C+ T+EL V+RQ D F+ LL VR G+C+ EV +LR+ A + + DGI T+L TH+ DV NE +L +L G V E + P+ R LD C L+LK+GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EVIR
Sbjct: 180 QLPPVTKGSQPPQ-FCFQAKSWRRCVPVTLELTEVWRQTDETFISLLQAVRLGRCSDEVTRQLRATAAHRVGR---------------DGIVATRLCTHQDDVALTNERQLQKLPGE--VHSFEAMDSDPEQARTLDAQCPVNQLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIR 359
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: F7ET02_MONDO (ATP-dependent DNA helicase PIF1 n=7 Tax=Metatheria TaxID=9263 RepID=F7ET02_MONDO) HSP 1 Score: 145 bits (365), Expect = 6.540e-37 Identity = 87/201 (43.28%), Postives = 117/201 (58.21%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ +P + CF+A+SW+ CIQ T+EL V+RQ D F+ LL VR G+C+ EV KL++ A + + DGI T+L TH+ DV NE RL +L G V E + P +R LD C L+LK+GAQV+LVKNLA +GL NG+RGVVV F + G LP V+F G+ EV+R
Sbjct: 343 QLPPVTKNNQPPQ-FCFQAKSWRKCIQLTMELTEVWRQTDPTFISLLQAVRLGRCSDEVTQKLKATARHKVER---------------DGILATRLCTHQDDVALTNERRLQQLPGQ--VHSYEAVDSDPTMVRTLDSQCPVSHLLQLKLGAQVMLVKNLAVSQGLVNGARGVVVGFE---ADGRGLPTVKFLCGVTEVVR 522
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Match: A0A3Q2HK39_HORSE (ATP-dependent DNA helicase PIF1 n=13 Tax=Laurasiatheria TaxID=314145 RepID=A0A3Q2HK39_HORSE) HSP 1 Score: 145 bits (365), Expect = 7.280e-37 Identity = 89/201 (44.28%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 1 QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVRWGQCTPEVLAKLRSCAENSTTKATGGGGEESSPQVVDDGIEKTQLLTHKADVLRVNEERLGRLDGAEVVSKAENRGNRPDYLRQLDDSCSAPATLRLKVGAQVILVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIR 603
QLPPV++ +P + CF+A+SW+ C+ T+EL V+RQ D FV LL VR G+C+ EV +LR+ A + + DGI T+L TH+ DV NE RL L G V E + P+ R LD C L+LK+GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EVIR
Sbjct: 346 QLPPVTKGSQPPQ-FCFQAKSWRRCVPVTLELTEVWRQADQTFVSLLQAVRLGRCSDEVTRQLRATATHKVGR---------------DGIVATRLCTHQDDVALTNERRLQELPGE--VHSFEAMDSDPEQARTLDAQCPVSQLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIR 525 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13526.2626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13526.2626.1 >prot_E-fasciculatus_F_contig13526.2626.1 ID=prot_E-fasciculatus_F_contig13526.2626.1|Name=mRNA_E-fasciculatus_F_contig13526.2626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=202bp QLPPVSRKGEPEKKLCFEARSWKACIQETVELKLVFRQQDNNFVKLLSKVback to top mRNA from alignment at E-fasciculatus_F_contig13526:393..3583- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13526.2626.1 ID=mRNA_E-fasciculatus_F_contig13526.2626.1|Name=mRNA_E-fasciculatus_F_contig13526.2626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3191bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13526:393..3583- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13526:393..3583- >mRNA_E-fasciculatus_F_contig13526.2626.1 ID=mRNA_E-fasciculatus_F_contig13526.2626.1|Name=mRNA_E-fasciculatus_F_contig13526.2626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1212bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13526:393..3583- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |