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Homology
BLAST of mRNA_E-fasciculatus_F_contig13505.2613.1 vs. uniprot
Match: D7G4G1_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G1_ECTSI) HSP 1 Score: 243 bits (620), Expect = 2.550e-66 Identity = 330/451 (73.17%), Postives = 335/451 (74.28%), Query Frame = 1
Query: 238 QPVEVNGWGDPPAATAGRDGSGWKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDWEERAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQAPRALQTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGNNGSVGVSGIPAMVTAAPGLSAA--------------ANAYRPVDLSKQTVAAGGARLPPGMGGPAAXXXXXXXXXGVGMTAAAAEWVPGLSTAAGMTSGRGVGGM-AAAVGGVDVSLLEAHMPASMADDGGVSXXXXXXXXXXXXXXXXXXQ-WAAAQLGYAPLTPLAGQTPSSLDIQAIMNAGVIRGMLMPPPAAAGRVMMCNFCGNMNPSLFSDAGQGYARCHGVYANGAL 1542
QPVE NGWGDPPA TAGRDGSGW AA XXXXXXX XX XXXXXXXXXXXXXXXX VDWEERAER XXXXXXXXXXXXXX QTQAPRALQTQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAGNNG+VGVSG P MVTAA ANAYRPVDLSKQT A GARLPPGMGGPAA GVGM AA +GGVDVSLLEAHM MADDGGV XXXXXXXXXXXXXXXXXX WAAAQLGYAPLTPL GQTPSS+D+QAIMNAGVIRGMLMPPPAAAGRVMMCNFCGNMNP+LFSDAGQGYARCHGVYANGAL
Sbjct: 922 QPVEANGWGDPPAPTAGRDGSGWTAAATSGAXXXXXXXRARGXXPAXXXXXXXXXXXXXXXXPRSS---VDWEERAERSRQNELAXXXXXXXXXXXXXXAPA---------QTQAPRALQTQQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---AAGNNGNVGVSGKPGMVTAAXXXXXXXXXXXXXXXXXXXXANAYRPVDLSKQTAA--GARLPPGMGGPAATVSGGG---GVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXAATMGGVDVSLLEAHMSTGMADDGGVXXXXXXXXXXXXXXXXXXXXXWAAAQLGYAPLTPLTGQTPSSVDVQAIMNAGVIRGMLMPPPAAAGRVMMCNFCGNMNPNLFSDAGQGYARCHGVYANGAL 1352
BLAST of mRNA_E-fasciculatus_F_contig13505.2613.1 vs. uniprot
Match: A0A6H5KUW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW2_9PHAE) HSP 1 Score: 171 bits (433), Expect = 8.090e-42 Identity = 133/221 (60.18%), Postives = 136/221 (61.54%), Query Frame = 1
Query: 880 AAGNNGSVGVSGIPAMVTAAPGLSAAANAYRPVDLSKQTVAAGGARLPPGMGGPAAXXXXXXXXXGVGMTAAAAEWVPGLSTAAGMTSGRGVGGMAAAVGGVDVSLLEAHMPASMADDGGVSXXXXXXXXXXXXXXXXXXQWAAAQLGYAPLTPLAGQTPSSLDIQAIMNAGVIRGMLMPPPAAAGRVMMCNFCGNMNPSLFSDAGQGYARCHGVYANGAL 1542
AAGNNG+VGVSG P MVTAAPGLSAAANAYRPVD SKQT AA ARLPPGMGGPAA VGM A VGGVD+SLLEAH P MADDG XXXXXXXXXXXXXXXXXX WAAAQ GYAPLTP VMMCNFCGNMNP+LFSDAGQGYARCHGVYANGAL
Sbjct: 1099 AAGNNGNVGVSGKPGMVTAAPGLSAAANAYRPVDFSKQTAAA--ARLPPGMGGPAAAVSGGGS---VGMXXXXXXXXXXXXXXXXXXXXXXXXXXXATVGGVDMSLLEAHTPTGMADDG--XXXXXXXXXXXXXXXXXXXXWAAAQFGYAPLTP---------------------------------VMMCNFCGNMNPNLFSDAGQGYARCHGVYANGAL 1279
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 246.1 |
| Seed ortholog evalue | 3.5e-62 |
| Seed eggNOG ortholog | 2880.D7G4G1 |
| KEGG ko | ko:K09537 |
| EggNOG free text desc. | toxin transport |
| EggNOG OGs | COG2214@1,KOG0691@2759 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03110 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1545 |
| Cds size | 1545 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13505.2613.1 >prot_E-fasciculatus_F_contig13505.2613.1 ID=prot_E-fasciculatus_F_contig13505.2613.1|Name=mRNA_E-fasciculatus_F_contig13505.2613.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=515bp
AAATAPAHGSTGAGAAGGRGRGAAYGGGGSGQNGTRPPPSPVSGQGHPDG EGVQVKAIPMRAREDADGGGWGKQKQKKKQPVEVNGWGDPPAATAGRDGS GWKAAAATSGAASNGGAARAHGGRPAAAVAAAAAAATATVSSSSPRSSVD WEERAERSRQNELAAARGGGGRAAAPPPAAAAAAAAAAPAQTQAPRALQT QQVAPKAAAAPVPPSQQQQQRQQPPPPPPPQVPPPPPVSQQQQQQYQQYQ TLPNQPDDSNHRAAPPPRQRQQQQPPPPPPPPRGPPPPQTSTPAAGNNGS VGVSGIPAMVTAAPGLSAAANAYRPVDLSKQTVAAGGARLPPGMGGPAAA AAASVSGGGVGMTAAAAEWVPGLSTAAGMTSGRGVGGMAAAVGGVDVSLL EAHMPASMADDGGVSAAAAAAAAAALSGTTVQQQWAAAQLGYAPLTPLAG QTPSSLDIQAIMNAGVIRGMLMPPPAAAGRVMMCNFCGNMNPSLFSDAGQ GYARCHGVYANGAL* back to topmRNA from alignment at E-fasciculatus_F_contig13505:307..3618- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig13505.2613.1 ID=mRNA_E-fasciculatus_F_contig13505.2613.1|Name=mRNA_E-fasciculatus_F_contig13505.2613.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3312bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13505:307..3618- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GCGGCGGCGACGGCGCCCGCCCACGGGTCCACCGGCGCCGGCGCTGCCGG
GGGGCGAGGCCGGGGGGCCGCCTACGGCGGCGGCGGCAGCGGGCAGAACG
GCACCAGGCCGCCCCCGTCGCCGGTCAGCGGGCAGGTGAGGTCGGTGGAG
GCGGGCGGGTGGGGGGAGGCCGCCGCTGTTACCGACGGCGTGAACGGGTG
GGGGCTGCAGGGGCACCCGGACGGGGAGGGGGTTCAGGTTAAGGCTATTC
CGATGCGCGCCCGGGAGGACGCGGACGGCGGCGGCTGGGGGAAGCAGAAG
CAGAAGAAGAAGCAGCCCGTGGAAGTGAACGGCTGGGGAGACCCCCCCGC
CGCCACTGCCGGGCGCGATGGCTCGGGGTGGAAAGCAGCGGCGGCGACGT
CGGGGGCCGCTAGTAACGGGGGCGCCGCCCGAGCGCATGGCGGAAGGCCG
GCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGACGGCGACGGTGTCTTC
GTCGTCGCCGCGGAGCTCGGTGGACTGGGAGGAAAGGGCGGAACGGTCCC
GCCAGAACGAGCTGGCGGCGGCTAGAGGCGGTGGCGGCAGGGCGGCTGCG
CCGCCGCCGGCTGCTGCTGCTGCTGCTGCCGCTGCGGCACCGGCCCAGAC
CCAGGCTCCGCGCGCGCTGCAGACACAGCAAGTCGCGCCGAAAGCGGCGG
CGGCGCCTGTGCCGCCGTCTCAGCAGCAGCAGCAGCGGCAGCAGCCCCCT
CCCCCTCCCCCTCCGCAGGTACCCCCTCCTCCTCCTGTGTCTCAGCAGCA
GCAACAGCAGTACCAGCAGTACCAGACGCTGCCCAACCAGCCCGACGACA
GCAACCACCGAGCTGCGCCGCCGCCGCGCCAGCGCCAACAGCAGCAGCCG
CCCCCGCCGCCGCCGCCGCCGCGGGGCCCCCCTCCCCCTCAGACAAGCAC
CCCCGCCGCTGGCAACAACGGCAGCGTTGGTGTGTCGGGGATACCGGCGA
TGGTGACGGCGGCGCCGGGGCTGTCAGCGGCGGCCAACGCCTATCGGCCG
GTGGACTTGTCCAAGCAGACGGTGGCGGCGGGGGGGGCGAGGTTGCCGCC
GGGGATGGGCGGGCCGGCGGCGGCGGCGGCGGCGTCGGTGAGTGGTGGCG
GTGTGGGCATGACGGCGGCGGCGGCGGAATGGGTGCCGGGACTGTCGACG
GCGGCGGGGATGACGAGCGGTCGAGGCGTCGGAGGGATGGCCGCTGCCGT
GGTGAGGCTTGGCGGTTAGCGTTGTTAGCGTTGTAAGCGTTTTTTCGTTG
TTGGCGTCTTTGTGTGTGGCTTGGCTCGCTGCTCGTCGTCGTTGTTGGCG
TCGTTGTTGTTGTTGTTTTGTTTTTGTGGTGGTGGTGGTGGTAGTGGTGG
TAGTGGTGGTTGTAGTTGACATCGTATTTGATATTGTTCGCGTTATTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGTTGATGCTGATGCTGCCGATATCGC
GGCTGTCGTTGCTGCTTCATTTCCTCGCTATAGGCGTTGCCGTCCTATCC
GCTTGCTCGCTCTCATCCACATGTCACGTCACAGTGTCGTTACCCTCTCG
AACACCTCTTTCCGTCATAACCGGAACCCTGACCTGTGAGTCCAGACGGC
AGGCGGCGGCCGTTAGTCCAGCTAACAAACACCTCTTACAGTAACGTCCA
TGGATGAATGCCGCTTTGTTTCTTCCAAGGGTGGCGTGGATGTGAGCCTG
CTGGAAGCCCACATGCCCGCAAGCATGGCTGACGACGGCGGAGTTTCTGC
CGCCGCCGCTGCCGCCGCCGCCGCCGCATTGTCGGGTACTACGGTACAGC
AGCAGTGGGCGGCGGCACAGTTGGGGTACGCCCCCCTGACTCCGGTAAGA
GCTCGATTTCTGGAAATCGCGGGATTGGTCGTATTCTTTTGATTTTTTTT
CGTTTTTTTTTGTTTACTACTCCAAAATACAAGTGTACTTTGTCCGGTTT
TATTTTTCTTGCGGTGCTTGGTTTTTAGGGATTTTTTTTTGTTTTTGTCA
CTCAACTTTTTGGGTTGTGCTCTCTGTGCTTGTCCAGGATTCCACAACAG
AGAGTGCGATAAAAAGATAAAAAGGATTGCAAGTGGGTTGGCGGAGTGTT
AGTTGTCCATCCTTATCCTTGTCAGGGGAAGAAGACTCATTTTATATCTA
GTGATGCAATATCGATTGGGGTCCCACGAGTTCTGCCGAAAATAGCCCCT
CGAGTTGTTAATTTACCCGCGAAAAGGTTTTGGAATCACGGGATTTCCGC
GAAACACGTGTAATGCAGCGAGGTGGAATTGGAACCCGTAGCCTTGCTTC
CTCCTTTTCGTCTCACCTCCTCTTTCTCTCTCCCCCTCTTCCCCCCCCCC
TCTCTCTCTCTACCCCCCTGTCCCCCCCTCCCATTTTCAACCTTCTCCCC
CTCTTTACCCCTCCTCTCTCTCTCCCTCCCATTTCCAACCCTTTCTCTCC
CCCCTACTGTATCCCCATCCTATTTTAGCTTGCTGGCCAAACACCTTCTA
GTCTTGATATCCAGGCGATTATGAATGCCGGCGTGATCCGAGGAATGTTG
ATGCCACCACCGGCTGCCGCCGGGCGGGTGAGATGCGCGCGCGCACGAGA
GAGAGAGAGAGAGAGAGTTTGGATCGATGTCGGGCAATTGAAGCGTGTAT
GAAAACGTGCACCAGTTGAACGTTAGAGCGTGGTACTGGCCGGAGACCGG
AGCGGTTTTTAATGTGACGACAACAACACGTGCGATATATAGCTTAGTTG
CGTCCAGAAACAATGGGACGATCTGCTTCCGCCAGCCTTGATCTGTCCGT
CTCATCGTCACCCCCGATATAGCCTCCTCGATGCCTACACTAGTAAACTC
GTGGTACCCTTGTTCGTAGGTCCGCGCTACTCCAGCTAGCGCTTATTGTA
CCCTTTGTTGACCGCCCGCTCCGTCCTCTCGAGGACGCGTTGTCAATGGT
CTAACGACTAAGGCATGCAAAACATGAGAGTACGCCCCCCCCCCCCCCGC
TCCATCCAGCGCTTACTGTACCCTTTCTTGGCTGTCCGCGCTACAGCACT
CCAGCCCACGCTCAACCGTACCCTTTTTTTGACCGTCCGCCCTACTTCAA
CCAGCACTGAACTGTACCCTTTTTATGACCGTCCGCGCTACGCTCAAGCC
GCAACAGGTGATGATGTGCAACTTCTGCGGCAACATGAACCCGAGCCTCT
TTTCGGACGCGGGACAGGGGTACGCACGCTGCCACGGGGTCTACGCGAAC
GGGGCTCTGTAA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig13505:307..3618- >mRNA_E-fasciculatus_F_contig13505.2613.1 ID=mRNA_E-fasciculatus_F_contig13505.2613.1|Name=mRNA_E-fasciculatus_F_contig13505.2613.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3090bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13505:307..3618- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GCGGCGGCGACGGCGCCCGCCCACGGGTCCACCGGCGCCGGCGCTGCCGG GGGGCGAGGCCGGGGGGCCGCCTACGGCGGCGGCGGCAGCGGGCAGAACG GCACCAGGCCGCCCCCGTCGCCGGTCAGCGGGCAGGCGGCGGCGACGGCG CCCGCCCACGGGTCCACCGGCGCCGGCGCTGCCGGGGGGCGAGGCCGGGG GGCCGCCTACGGCGGCGGCGGCAGCGGGCAGAACGGCACCAGGCCGCCCC CGTCGCCGGTCAGCGGGCAGGGGCACCCGGACGGGGAGGGGGTTCAGGTT AAGGCTATTCCGATGCGCGCCCGGGAGGACGCGGACGGCGGCGGCTGGGG GAAGCAGAAGCAGAAGAAGAAGCAGCCCGTGGAAGTGAACGGCTGGGGAG ACCCCCCCGCCGCCACTGCCGGGCGCGATGGCTCGGGGTGGAAAGCAGCG GCGGCGACGTCGGGGGCCGCTAGTAACGGGGGCGCCGCCCGAGCGCATGG CGGAAGGCCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGACGGCGA CGGTGTCTTCGTCGTCGCCGCGGAGCTCGGTGGACTGGGAGGAAAGGGCG GAACGGTCCCGCCAGAACGAGCTGGCGGCGGCTAGAGGCGGTGGCGGCAG GGCGGCTGCGCCGCCGCCGGCTGCTGCTGCTGCTGCTGCCGCTGCGGCAC CGGCCCAGACCCAGGCTCCGCGCGCGCTGCAGACACAGCAAGTCGCGCCG AAAGCGGCGGCGGCGCCTGTGCCGCCGTCTCAGCAGCAGCAGCAGCGGCA GCAGCCCCCTCCCCCTCCCCCTCCGCAGGTACCCCCTCCTCCTCCTGTGT CTCAGCAGCAGCAACAGCAGTACCAGCAGTACCAGACGCTGCCCAACCAG CCCGACGACAGCAACCACCGAGCTGCGCCGCCGCCGCGCCAGCGCCAACA GCAGCAGCCGCCCCCGCCGCCGCCGCCGCCGCGGGGCCCCCCTCCCCCTC AGACAAGCACCCCCGCCGCTGGCAACAACGGCAGCGTTGGTGTGTCGGGG ATACCGGCGATGGTGACGGCGGCGCCGGGGCTGTCAGCGGCGGCCAACGC CTATCGGCCGGTGGACTTGTCCAAGCAGACGGTGGCGGCGGGGGGGGCGA GGTTGCCGCCGGGGATGGGCGGGCCGGCGGCGGCGGCGGCGGCGTCGGTG AGTGGTGGCGGTGTGGGCATGACGGCGGCGGCGGCGGAATGGGTGCCGGG ACTGTCGACGGCGGCGGGGATGACGAGCGGTCGAGGCGTCGGAGGGATGG CCGCTGCCGTGGGGCACCCGGACGGGGAGGGGGTTCAGGTTAAGGCTATT CCGATGCGCGCCCGGGAGGACGCGGACGGCGGCGGCTGGGGGAAGCAGAA GCAGAAGAAGAAGCAGCCCGTGGAAGTGAACGGCTGGGGAGACCCCCCCG CCGCCACTGCCGGGCGCGATGGCTCGGGGTGGAAAGCAGCGGCGGCGACG TCGGGGGCCGCTAGTAACGGGGGCGCCGCCCGAGCGCATGGCGGAAGGCC GGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGACGGCGACGGTGTCTT CGTCGTCGCCGCGGAGCTCGGTGGACTGGGAGGAAAGGGCGGAACGGTCC CGCCAGAACGAGCTGGCGGCGGCTAGAGGCGGTGGCGGCAGGGCGGCTGC GCCGCCGCCGGCTGCTGCTGCTGCTGCTGCCGCTGCGGCACCGGCCCAGA CCCAGGCTCCGCGCGCGCTGCAGACACAGCAAGTCGCGCCGAAAGCGGCG GCGGCGCCTGTGCCGCCGTCTCAGCAGCAGCAGCAGCGGCAGCAGCCCCC TCCCCCTCCCCCTCCGCAGGTACCCCCTCCTCCTCCTGTGTCTCAGCAGC AGCAACAGCAGTACCAGCAGTACCAGACGCTGCCCAACCAGCCCGACGAC AGCAACCACCGAGCTGCGCCGCCGCCGCGCCAGCGCCAACAGCAGCAGCC GCCCCCGCCGCCGCCGCCGCCGCGGGGCCCCCCTCCCCCTCAGACAAGCA CCCCCGCCGCTGGCAACAACGGCAGCGTTGGTGTGTCGGGGATACCGGCG ATGGTGACGGCGGCGCCGGGGCTGTCAGCGGCGGCCAACGCCTATCGGCC GGTGGACTTGTCCAAGCAGACGGTGGCGGCGGGGGGGGCGAGGTTGCCGC CGGGGATGGGCGGGCCGGCGGCGGCGGCGGCGGCGTCGGTGAGTGGTGGC GGTGTGGGCATGACGGCGGCGGCGGCGGAATGGGTGCCGGGACTGTCGAC GGCGGCGGGGATGACGAGCGGTCGAGGCGTCGGAGGGATGGCCGCTGCCG TGGGTGGCGTGGATGTGAGCCTGCTGGAAGCCCACATGCCCGCAAGCATG GCTGACGACGGCGGAGTTTCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGC ATTGTCGGGTACTACGGTACAGCAGCAGTGGGCGGCGGCACAGTTGGGGT ACGCCCCCCTGACTCCGGGTGGCGTGGATGTGAGCCTGCTGGAAGCCCAC ATGCCCGCAAGCATGGCTGACGACGGCGGAGTTTCTGCCGCCGCCGCTGC CGCCGCCGCCGCCGCATTGTCGGGTACTACGGTACAGCAGCAGTGGGCGG CGGCACAGTTGGGGTACGCCCCCCTGACTCCGCTTGCTGGCCAAACACCT TCTAGTCTTGATATCCAGGCGATTATGAATGCCGGCGTGATCCGAGGAAT GTTGATGCCACCACCGGCTGCCGCCGGGCGGCTTGCTGGCCAAACACCTT CTAGTCTTGATATCCAGGCGATTATGAATGCCGGCGTGATCCGAGGAATG TTGATGCCACCACCGGCTGCCGCCGGGCGGGTGATGATGTGCAACTTCTG CGGCAACATGAACCCGAGCCTCTTTTCGGACGCGGGACAGGGGTACGCAC GCTGCCACGGGGTCTACGCGAACGGGGCTCTGTAAGTGATGATGTGCAAC TTCTGCGGCAACATGAACCCGAGCCTCTTTTCGGACGCGGGACAGGGGTA CGCACGCTGCCACGGGGTCTACGCGAACGGGGCTCTGTAA back to top
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