mRNA_E-fasciculatus_F_contig13504.2612.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI) HSP 1 Score: 298 bits (764), Expect = 4.270e-96 Identity = 157/198 (79.29%), Postives = 157/198 (79.29%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKA-------------------------------------SWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQ-LQQGLEQ 492
VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKA SW DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQ LQQGLEQ
Sbjct: 140 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARLSRSRYFLMRCAFFRQAGWLPLCRPAVLGGGGVAPFSWRGHDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQQLQQGLEQ 337
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA) HSP 1 Score: 199 bits (506), Expect = 3.360e-58 Identity = 93/143 (65.03%), Postives = 116/143 (81.12%), Query Frame = 1
Query: 10 QVHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEE 438
+ HEG+MYR+FEGE DRSHHG P++LYSTA+NMRT IS+G +D+ RL NL+ VEM LS +GKD+++TR YKD+MK++AFD+I+H+A NCDLH TVT RAKELFAGWRNVKEHVH K AVICACI+AAYR + +E
Sbjct: 89 KAHEGNMYRQFEGEVDRSHHGLPPDKLYSTAYNMRTQISKGA-----LDSARLANLSSYVEMNLSQMGKDDKRTRVGYKDQMKKQAFDVIDHMAANCDLHGTVTERAKELFAGWRNVKEHVHHKNAVICACIVAAYRTIAADE 226
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: A0A6H5K4A0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A0_9PHAE) HSP 1 Score: 160 bits (404), Expect = 3.000e-48 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 1
Query: 253 MKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQ-LQQGLEQ 492
MKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQ LQQGLEQ
Sbjct: 1 MKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQQLQQGLEQ 81
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: A0A3R7GL14_9STRA (C2H2-type domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GL14_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.740e-46 Identity = 83/141 (58.87%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTE 435
VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY E G E
Sbjct: 171 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEM-----AGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTMSNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETGKE 306
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: A0A024GKS6_9STRA (C2H2-type domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKS6_9STRA) HSP 1 Score: 165 bits (418), Expect = 6.040e-46 Identity = 84/149 (56.38%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDL 459
VHEGS YRKFEGE D+SHHGPAPN+L+ST+HN+RT IS+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY G E T L
Sbjct: 164 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEM-----AGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYIATGREMYTAQHGL 307
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: A0A8K1FG42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG42_PYTOL) HSP 1 Score: 164 bits (415), Expect = 2.050e-45 Identity = 82/144 (56.94%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELT 444
VHEGS YRKFEGE D+SHHGPAPN+L+S++HN+RT IS+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+++EHVHQ AV+ C+IAAY E E T
Sbjct: 172 VHEGSAYRKFEGEEDKSHHGPAPNKLFSSSHNLRTLISQDGEM-----AGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKASRLIDHTISNLDLHEIVGNRAKKMFADFRDLREHVHQFEAVVAGCVIAAYMETAKEMYT 310
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: W2RG83_PHYPN (C2H2-type domain-containing protein n=38 Tax=Peronosporaceae TaxID=4777 RepID=W2RG83_PHYPN) HSP 1 Score: 164 bits (416), Expect = 2.520e-45 Identity = 82/141 (58.16%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTE 435
VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY E E
Sbjct: 210 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEM-----AGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 345
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: T0QRB4_SAPDV (C2H2-type domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QRB4_SAPDV) HSP 1 Score: 162 bits (411), Expect = 5.880e-45 Identity = 86/145 (59.31%), Postives = 105/145 (72.41%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELT 444
VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ S AN LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+++EHVHQ AV+ CII AY G E T
Sbjct: 147 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQS-----AN-LRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKEMYT 285
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: K3X3Y0_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Y0_GLOUD) HSP 1 Score: 163 bits (412), Expect = 7.000e-45 Identity = 80/141 (56.74%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTE 435
VHEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IA+Y + G E
Sbjct: 181 VHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEM-----AGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIASYMDTGKE 316
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Match: A0A0W8C063_PHYNI (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C063_PHYNI) HSP 1 Score: 164 bits (416), Expect = 1.220e-44 Identity = 82/141 (58.16%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 13 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPIDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTE 435
VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY E E
Sbjct: 334 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEM-----AGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 469 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13504.2612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13504.2612.1 >prot_E-fasciculatus_F_contig13504.2612.1 ID=prot_E-fasciculatus_F_contig13504.2612.1|Name=mRNA_E-fasciculatus_F_contig13504.2612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp MSLQVHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKASWTPback to top mRNA from alignment at E-fasciculatus_F_contig13504:13..2177- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13504.2612.1 ID=mRNA_E-fasciculatus_F_contig13504.2612.1|Name=mRNA_E-fasciculatus_F_contig13504.2612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2165bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13504:13..2177- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13504:13..2177- >mRNA_E-fasciculatus_F_contig13504.2612.1 ID=mRNA_E-fasciculatus_F_contig13504.2612.1|Name=mRNA_E-fasciculatus_F_contig13504.2612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13504:13..2177- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |