mRNA_E-fasciculatus_F_contig13497.2608.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13497.2608.1
Unique NamemRNA_E-fasciculatus_F_contig13497.2608.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: D8LEG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG6_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 1.260e-164
Identity = 247/273 (90.48%), Postives = 253/273 (92.67%), Query Frame = 2
Query:  278 GCFRLFAPRPLCGD*PPAVYTSAERRRVGGVVAMATSSARGPPGDGEDARSPDELKARAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHRNDMEDGPNLKVN 1096
            G  R F+  P   + P  +  +  R RVG VVAMATSSARGP GDGEDARSPDELKA+AAKNMLSESSVASVVYYWLEFRDDLTPQWMKQF YRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELR+SGDRYTLNWLEKFMHRNDMEDGPNLK N
Sbjct:   36 GLVRPFSAAPTT-EAPSRLQCAERRSRVGRVVAMATSSARGP-GDGEDARSPDELKAQAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFTYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRVSGDRYTLNWLEKFMHRNDMEDGPNLKGN 306          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.630e-59
Identity = 113/258 (43.80%), Postives = 154/258 (59.69%), Query Frame = 2
Query:  449 RAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLN----------------NTSSPYRGKNYKL--------------------------LLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHRNDMEDGPNLKVN 1096
            R+ KN+L+  + ASV YYW+EFRD+L P+W+K+F     ++  +GW   LG L+R EPEE+ VR+++QRP+GGSGNNP+L   R  MEY VLIEP +IA ++M VREQ+++EWI+DL L+  EN+E+ RH  D+L +D++     R+LVFDHDP                   T  PYRGKNY+                           LL M+T+ AVR Y +ELR SG RY  NWLE+FM    ++ G  LK N
Sbjct:   63 RSVKNLLAVQASASVQYYWMEFRDELQPRWLKEFEEAGHNVGQVGWDHFLGSLMRTEPEEVTVRKMAQRPKGGSGNNPFLSDTRHAMEYTVLIEPFQIAKRIMTVREQLAQEWIKDLELVETENAELLRHHVDTLSMDAKQADSSRQLVFDHDPCAVEGEVLXXXXXXXXXYGTKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFM----LKGGKGLKGN 316          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A836CAL6_9STRA (Alpha-type protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL6_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.370e-54
Identity = 98/228 (42.98%), Postives = 159/228 (69.74%), Query Frame = 2
Query:  449 RAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLN-NTSSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHR-------ND----MEDGPNLKVN 1096
            ++ +N+L+  + A+V +YWLEFRD+L P W+K+F   + ++ ++GW   L  L+R+EPE + V++ +QRP+GGSGNNP+L  NRTQ+EY V+++P +IA K+M+VREQ+++EW++DL L+  EN E+ RH +D L ++++   R R+L F +DP   N  SP   +NY+ L++++TK A+R Y +ELR++G RY  NWLE+F+ +       ND    M +GP + +N
Sbjct:  409 QSLRNLLAVRASATVQHYWLEFRDELQPTWLKEFEEADHNVGEVGWDGFLTALMRSEPESITVKKKAQRPRGGSGNNPFLSDNRTQIEYTVVVKPYEIAKKIMKVREQLAQEWMRDLQLMDQENHELLRHHDDLLVMNADEADRARQLFFYNDPWGTNAKSPLHQQNYRELIELVTKVALRRYETELRMTGQRYHANWLERFLVKAGDNLVGNDLMEAMLEGPMMMIN 636          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: D7FSH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH1_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.210e-36
Identity = 80/213 (37.56%), Postives = 134/213 (62.91%), Query Frame = 2
Query:  437 ELKARAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVER--HREDSLCLDSESKKR--DRKLVFDHDPLNNTSSPYRGKN-YKLLLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHR 1060
            E  A+   ++++ +++ +   YW+E R ++  +W+ ++    G ++D+GWH     +LRA PE++VV++L + P+GGSGNNP+L A+R  +EYN  IEP  IA ++M++REQ++ +   DL  ISAEN+ ++   H E  L  D     R    K + D DP + T +P R ++ YK  L+++T A++R  ++ELRI GD  TL+WL++F  R
Sbjct:   74 EFYAKRLLDLITHNALLTANTYWMELRGNMYIEWLNRYIEERGGVEDVGWHAFFAGMLRAPPEDVVVKKLIKSPRGGSGNNPFL-ADRKPVEYNETIEPTTIARRLMEIREQVAEQLGSDLQQISAENARLQADYHYESELGPDRAQALRLSSLKPMTDVDPSSGTGNPPRRRSTYKDALELVTAASMRRVKAELRIRGDMVTLDWLDRFSSR 285          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A835Z7Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.600e-31
Identity = 75/218 (34.40%), Postives = 123/218 (56.42%), Query Frame = 2
Query:  449 RAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDI---GWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSE-----------VERHREDSLCLDSESKKRDR----KLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEK 1048
            R  KN+L+E S+ + +YYWLE R ++  ++M +F    G    +   GW   L  LL + PEE+++ ++ ++P+GGSG NPYL A +  + Y  +IEP  +  +++ +R Q++ E   DL LI +EN             V++  +D L    +   R R    + V D D +N+T +PYR   Y  +L ++TK ++  Y+ ELRI GD++TL WL+K
Sbjct:   10 RRLKNVLTEKSLQTAMYYWLELRGNMYSEYMARFTEGEGGGGSVVARGWRTFLSNLLSSPPEEVIIEKVVKKPRGGSGTNPYLAARKV-VSYTEVIEPMTLGRRILDIRAQLAAELFHDLELIESENERXXXXXXXXXXXVQQFYQDELRYGIKEATRLRLRTWQPVVDTDAINSTDTPYRSSLYLAVLALVTKVSLERYKKELRIVGDKHTLAWLDK 226          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A7S0M0P7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M0P7_9CRYP)

HSP 1 Score: 77.4 bits (189), Expect = 1.170e-12
Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 2
Query:  461 NMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDI-------GWHQHLGLLLRAEPEEMVVRRL-SQRPQGGSGNNPYLKANRTQM-EYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKR-----------DRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAA 982
            ++L + +V + +YY+ EFRD    QW++ F    G ++D+       G  ++L  +L++ PE   +++    R  GGS NNP+LK    +   YN  I PQKI   ++ +REQ+  EWI DL+LI  +N++    ++ +L   +E +             D  +       N+ S+P R KNY    D++ KAA
Sbjct:   58 DLLCQRAVQTQLYYFAEFRDGFKRQWLENFRGHQG-LKDVHTFGALNGAKEYLEQMLQSPPESHEIKQQWGNRFAGGSKNNPFLKPPEERFTSYNETIAPQKICKGILDIREQLVAEWIDDLALIPLDNAQFIHDQQQNLSSANEEEASGGTAEQGYHAYDSYIAQSMVMANSASTPLRMKNY----DVLKKAA 246          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A7S0UCD9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCD9_HEMAN)

HSP 1 Score: 70.1 bits (170), Expect = 1.200e-9
Identity = 63/196 (32.14%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  515 RDDLTPQWMKQFAYRNGDIQDIG-------WHQHLGLLLRAEPEEMVV---RRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEV-----ERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRI-SGDRYTLNWLEKFM 1054
            RD +T  W+ ++    G  +  G       W  ++  LLRA  E +VV   RR +    G SGNNPYLK +  +ME    I P+++A ++M VRE+ISREWI  L L+  EN EV     E+ R      DS++  +  +L  + DP +   S ++G +Y L+  + T  A    +  L   S  +    +LE+ +
Sbjct:   98 RDQITADWLAEWNEHEGIERYHGLNGLQMDWRDYINDLLRAPGETLVVEFKRRGNSGHGGWSGNNPYLKDHVMEME--TPINPRQLAERLMAVREEISREWIDMLPLLQKENEEVWRSWFEKVRSKDGATDSQANLQLPQLE-NFDPTHLQGSLFQGGDYDLIKTLATLCAFDRVKQSLETGSAGKPQAEFLERML 290          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A1Z5KEZ6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEZ6_FISSO)

HSP 1 Score: 67.0 bits (162), Expect = 1.520e-8
Identity = 66/246 (26.83%), Postives = 117/246 (47.56%), Query Frame = 2
Query:  458 KNMLSESSVASVVYYWLEFRDDLTPQWMKQ-FAYRN-------GDIQDIGWHQHLGLL--LRAEPEEMVVRRLSQRPQGGSG---NNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEV----------ERHREDSLCLDSESKKRDRKLV-------------FDHDP---LNNT-------SSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLN--WLEKF 1051
            KN L++ ++ S ++  ++ RD  T +WM+  + +RN       G      W     +L  +  +P++ V+ +  +R +G  G   NNPYL+     +E+ + I+P  +AS+++ VREQI+REW++DL  +   N ++           R  E S     +S++   +LV             FD +    L +T       SSP R  N+ LL  ++T+ ++     E R SGD   ++  WL+ F
Sbjct:   81 KNFLTQRAIQSFIFLLVQCRDPHTVRWMENTYEFRNMESYHGTGAFNLTKWKTWDSILDDMLHQPKDCVIVQAKRRGKGHGGWSANNPYLEERF--VEFRIDIDPVSLASRILSVREQIAREWMEDLVTLRTANDQILDSYYDMGRAAREDESSSSSSKDSEENVEQLVTPYSGIDEKQRRVFDRNAMLMLTSTMIFKAFASSPQRQGNFDLLYLLLTQESLHRVLREYRESGDEREVSYEWLKGF 324          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A1Z5JVQ5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ5_FISSO)

HSP 1 Score: 65.9 bits (159), Expect = 3.400e-8
Identity = 66/241 (27.39%), Postives = 117/241 (48.55%), Query Frame = 2
Query:  458 KNMLSESSVASVVYYWLEFRDDLTPQWMKQ-FAYRN-------GDIQDIGWHQHLGLL--LRAEPEEMVVRRLSQRPQGGSG---NNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEV--------ERHRED-SLCLDSESKKRD---------RKLVFDHDP---LNNT-------SSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLN--WLEKF 1051
            KN L++ ++ S ++  ++ RD  T +W++  + +RN       G      W     +L  +  +P++ V+ +  +R +G  G   NNPYL+     +E+ + I+P  +AS+++ VREQI+REW +DL  +   N ++           RED S  L  E+             ++ VFD +    L +T       SSP R  N+ LL  ++T+ ++     E R SGD   ++  WL++F
Sbjct:   68 KNFLTQRAIQSFIFLLVQCRDPHTVRWLENTYEFRNMESYHGTGAFNLTKWKTWDSILDDMLHQPKDCVIVQAKRRGRGHGGWSANNPYLEERF--VEFRIDIDPVSLASRILSVREQIAREWREDLVTLRTANDQILDSYYDMGRAAREDESSSLQEETNVEQLVTPGVDEKQRRVFDRNAMLMLTSTMIFKAFASSPQRQGNFDLLYLLLTQESLHRVLREYRKSGDEREVSYEWLKEF 306          
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: L1IYU5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IYU5_GUITC)

HSP 1 Score: 63.2 bits (152), Expect = 7.970e-8
Identity = 51/167 (30.54%), Postives = 77/167 (46.11%), Query Frame = 2
Query:  593 HLGLLLRAEPEEMVVR-RLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSE--VERHREDSLCLDSESKKRDRKLVFDHDPLNNT------------SSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEK 1048
            +L  +L + PEE+ V+ R   R  GGS +NPYLK       Y   I PQKI   +M++REQ+  EW+ DL+++  E+    ++ H E+ L        R +     H+  + T            SSP RG+N+ +L  + T  AV+              L WL K
Sbjct:    6 YLEKMLHSPPEEIEVQMRWGNRYGGGSKDNPYLKDTPRFNTYTETIHPQKICKGLMEIREQLLSEWVNDLAIVQHEDHLFWIQVHEEEELQRAENITSRKKTSETGHEDGDMTDLVLIGTRGDYESSPLRGRNFDVLKRLSTYIAVKKLLGRKGDGNSESNLKWLGK 172          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LEG6_ECTSI1.260e-16490.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQU4_9STRA1.630e-5943.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAL6_9STRA2.370e-5442.98Alpha-type protein kinase domain-containing protei... [more]
D7FSH1_ECTSI3.210e-3637.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7Q1_9STRA2.600e-3134.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0M0P7_9CRYP1.170e-1230.41Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0UCD9_HEMAN1.200e-932.14Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A1Z5KEZ6_FISSO1.520e-826.83Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JVQ5_FISSO3.400e-827.39Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
L1IYU5_GUITC7.970e-830.54Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13497contigE-fasciculatus_F_contig13497:1253..3262 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score467.2
Seed ortholog evalue4.5e-129
Seed eggNOG ortholog2880.D8LEG6
EggNOG OGs2E04B@1,2S7JZ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved secreted protein
Ec32 orthologEc-21_004770.1
Exons4
Model size1099
Cds size723
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13497.2608.1prot_E-fasciculatus_F_contig13497.2608.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13497 1629..3262 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927847.8498964-UTR-E-fasciculatus_F_contig13497:1252..16281622927847.8498964-UTR-E-fasciculatus_F_contig13497:1252..1628Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13497 1253..1628 +
1695995721.242111-UTR-E-fasciculatus_F_contig13497:1252..16281695995721.242111-UTR-E-fasciculatus_F_contig13497:1252..1628Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13497 1253..1628 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927847.8674893-CDS-E-fasciculatus_F_contig13497:1628..17021622927847.8674893-CDS-E-fasciculatus_F_contig13497:1628..1702Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 1629..1702 +
1695995721.252766-CDS-E-fasciculatus_F_contig13497:1628..17021695995721.252766-CDS-E-fasciculatus_F_contig13497:1628..1702Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 1629..1702 +
1622927847.883299-CDS-E-fasciculatus_F_contig13497:1882..21921622927847.883299-CDS-E-fasciculatus_F_contig13497:1882..2192Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 1883..2192 +
1695995721.2620456-CDS-E-fasciculatus_F_contig13497:1882..21921695995721.2620456-CDS-E-fasciculatus_F_contig13497:1882..2192Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 1883..2192 +
1622927847.8986156-CDS-E-fasciculatus_F_contig13497:2484..26291622927847.8986156-CDS-E-fasciculatus_F_contig13497:2484..2629Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 2485..2629 +
1695995721.2716932-CDS-E-fasciculatus_F_contig13497:2484..26291695995721.2716932-CDS-E-fasciculatus_F_contig13497:2484..2629Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 2485..2629 +
1622927847.9151146-CDS-E-fasciculatus_F_contig13497:3068..32621622927847.9151146-CDS-E-fasciculatus_F_contig13497:3068..3262Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 3069..3262 +
1695995721.281522-CDS-E-fasciculatus_F_contig13497:3068..32621695995721.281522-CDS-E-fasciculatus_F_contig13497:3068..3262Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13497 3069..3262 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13497.2608.1

>prot_E-fasciculatus_F_contig13497.2608.1 ID=prot_E-fasciculatus_F_contig13497.2608.1|Name=mRNA_E-fasciculatus_F_contig13497.2608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=241bp
MATSSARGPPGDGEDARSPDELKARAAKNMLSESSVASVVYYWLEFRDDL
TPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGN
NPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSE
VERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITK
AAVRAYRSELRISGDRYTLNWLEKFMHRNDMEDGPNLKVNN
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mRNA from alignment at E-fasciculatus_F_contig13497:1253..3262+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13497.2608.1 ID=mRNA_E-fasciculatus_F_contig13497.2608.1|Name=mRNA_E-fasciculatus_F_contig13497.2608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2010bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13497:1253..3262+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGTCGAGACCAGCGGCTACAAGTATGGATAGACACGTCCATTTTCCATAC AATACGGCAGTTGCCGCGAAGACCGAATTTGCTCCGTTCGCTCTTTCGGA AGGAATATGTATGCATACATACACTTAAAAGTACAGCAGGATTTCGGGGG CACATTGATGTTCCTTGTGTGCTACTATGCGCATGTATGTCTACTTTGAA TGAACTAAGGAGCCCTAATTTTGTAGCGAGAACATGATGACCACACACCA GTGACTAATCCCATTCCTTGTCCCTGTGGCTGTTTTCGTCTCTTTGCCCC CCGTCCGTTGTGTGGGGACTGACCACCTGCCGTTTACACCAGCGCCGAGA GACGCAGAGTTGGGGGGGTCGTGGCGATGGCCACGTCTAGCGCGCGGGGG CCGCCGGGAGACGGAGAGGACGCAAGAAGTCCGGACGAGCTCAAAGCACG GTGAGAACTACCATCATATCACAACCGCACATCCCTTCGCCTGACGTTCA ACAAGTATGGGGGATTCATCTGTCCTGTACCGGTGGCAGAATCGAAGTCT ATAATACGCCATGAGAGTGTCCACCAGACCGTTTCTCTGACATCTTGCCC CCCCCCCCCGCCCCCCCCTAAAACTTACAGGGCGGCGAAAAACATGCTCT CCGAGTCCTCCGTGGCGAGCGTGGTGTACTACTGGCTGGAGTTCCGAGAC GACCTCACCCCCCAGTGGATGAAGCAGTTCGCGTACCGCAACGGCGACAT CCAGGACATTGGCTGGCACCAGCACCTGGGCCTCCTCCTCAGGGCCGAGC CCGAGGAGATGGTGGTCCGCAGGCTGTCGCAGAGGCCGCAGGGCGGCTCG GGCAACAACCCGTACCTCAAGGCCAACCGCACCCAGATGGAGTACAACGT GCTCATCGAACCCCAGAAGATCGCCAGCAAAGTCATGCAGGTACTATTTA TGATGTGCTCTGCTTGCTGTGGGTGTTTTGATTTCTTTGGCTCGCACGTG ATGAGAGAGCGCGGCTTTATCGTAGATGCGTGATGAGAGTGCGACTTGCT GTTTCTTCCGTCCCCCCCCCCCCCCCCCCCCCTTTCGTGATTCGTCGCAA AATGATATTTTGCTTTGCGATGCAACAGCGAATTAATTTGTGCGCACGTC TCTCGCATTTCTTTGTTTGGTTAACTCTCGTTGTTTCTCTGTCCCGCTGA TACATACCCTCCCATCGACCTGGCCAACGCAGGTTCGGGAACAGATCTCC CGCGAGTGGATCCAAGACCTGAGCCTCATCTCCGCCGAGAACTCCGAGGT GGAGAGGCACCGGGAGGACTCCTTGTGTCTCGACTCGGAGTCCAAGAAGA GGGACAGGAAACTCGTCTTCGACCACGGTGAGAGAGAGAGAGAAAGAGAG ACAAGACAAGAGAGAGGAAGAATGCGAGAGAGAGATAGGGGAGGCAGATA TGCGAGAGAGATGGGAAAGATGAACGGAGAGAAAGAGAGACAGAGAGAGA GTTGGGAGACAGACATGCGAGAGAGAGACAAGACAGCAGAGAGAAAGAGA GAGAGGTAGAAGCAGAGAGGCAGCGAGACAACCTTGATCGGGTTTTCGAC TTTCCATTACCAACACGGGATGTGGGTGGTTGCTCTTGATTGTCGTGTTT TGTTTTTCATGGAATTTATTTCTCTCTGTCGCACACATACATCCCGAAAA ACGGAGTTTCACCATGAGACTAATACGAGCTTGTTCTCCTTACCTTCGGT TTGTGGCAAAGCAATTTCCAACGAGACACGCGTTTTGTGCGTACACACAC GGAAAAATCACAACAGACCCTCTCAACAACACGAGCTCGCCCTACCGCGG CAAGAACTACAAGCTTCTGCTGGACATGATAACCAAGGCCGCCGTCAGGG CGTACCGCTCCGAGCTGCGCATCTCCGGAGACCGGTACACCCTCAACTGG CTCGAGAAGTTCATGCACAGGAACGACATGGAGGACGGACCCAACCTCAA GGTGAACAAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13497:1253..3262+

>mRNA_E-fasciculatus_F_contig13497.2608.1 ID=mRNA_E-fasciculatus_F_contig13497.2608.1|Name=mRNA_E-fasciculatus_F_contig13497.2608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1446bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13497:1253..3262+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCCACGTCTAGCGCGCGGGGGCCGCCGGGAGACGGAGAGGACGCAAG
AAGTCCGGACGAGCTCAAAGCACGATGGCCACGTCTAGCGCGCGGGGGCC
GCCGGGAGACGGAGAGGACGCAAGAAGTCCGGACGAGCTCAAAGCACGGG
CGGCGAAAAACATGCTCTCCGAGTCCTCCGTGGCGAGCGTGGTGTACTAC
TGGCTGGAGTTCCGAGACGACCTCACCCCCCAGTGGATGAAGCAGTTCGC
GTACCGCAACGGCGACATCCAGGACATTGGCTGGCACCAGCACCTGGGCC
TCCTCCTCAGGGCCGAGCCCGAGGAGATGGTGGTCCGCAGGCTGTCGCAG
AGGCCGCAGGGCGGCTCGGGCAACAACCCGTACCTCAAGGCCAACCGCAC
CCAGATGGAGTACAACGTGCTCATCGAACCCCAGAAGATCGCCAGCAAAG
TCATGCAGGGCGGCGAAAAACATGCTCTCCGAGTCCTCCGTGGCGAGCGT
GGTGTACTACTGGCTGGAGTTCCGAGACGACCTCACCCCCCAGTGGATGA
AGCAGTTCGCGTACCGCAACGGCGACATCCAGGACATTGGCTGGCACCAG
CACCTGGGCCTCCTCCTCAGGGCCGAGCCCGAGGAGATGGTGGTCCGCAG
GCTGTCGCAGAGGCCGCAGGGCGGCTCGGGCAACAACCCGTACCTCAAGG
CCAACCGCACCCAGATGGAGTACAACGTGCTCATCGAACCCCAGAAGATC
GCCAGCAAAGTCATGCAGGTTCGGGAACAGATCTCCCGCGAGTGGATCCA
AGACCTGAGCCTCATCTCCGCCGAGAACTCCGAGGTGGAGAGGCACCGGG
AGGACTCCTTGTGTCTCGACTCGGAGTCCAAGAAGAGGGACAGGAAACTC
GTCTTCGACCACGGTTCGGGAACAGATCTCCCGCGAGTGGATCCAAGACC
TGAGCCTCATCTCCGCCGAGAACTCCGAGGTGGAGAGGCACCGGGAGGAC
TCCTTGTGTCTCGACTCGGAGTCCAAGAAGAGGGACAGGAAACTCGTCTT
CGACCACGACCCTCTCAACAACACGAGCTCGCCCTACCGCGGCAAGAACT
ACAAGCTTCTGCTGGACATGATAACCAAGGCCGCCGTCAGGGCGTACCGC
TCCGAGCTGCGCATCTCCGGAGACCGGTACACCCTCAACTGGCTCGAGAA
GTTCATGCACAGGAACGACATGGAGGACGGACCCAACCTCAAGGTGAACA
ACACCCTCTCAACAACACGAGCTCGCCCTACCGCGGCAAGAACTACAAGC
TTCTGCTGGACATGATAACCAAGGCCGCCGTCAGGGCGTACCGCTCCGAG
CTGCGCATCTCCGGAGACCGGTACACCCTCAACTGGCTCGAGAAGTTCAT
GCACAGGAACGACATGGAGGACGGACCCAACCTCAAGGTGAACAAC
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