mRNA_E-fasciculatus_F_contig13497.2608.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: D8LEG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG6_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 1.260e-164 Identity = 247/273 (90.48%), Postives = 253/273 (92.67%), Query Frame = 2
Query: 278 GCFRLFAPRPLCGD*PPAVYTSAERRRVGGVVAMATSSARGPPGDGEDARSPDELKARAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHRNDMEDGPNLKVN 1096
G R F+ P + P + + R RVG VVAMATSSARGP GDGEDARSPDELKA+AAKNMLSESSVASVVYYWLEFRDDLTPQWMKQF YRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELR+SGDRYTLNWLEKFMHRNDMEDGPNLK N
Sbjct: 36 GLVRPFSAAPTT-EAPSRLQCAERRSRVGRVVAMATSSARGP-GDGEDARSPDELKAQAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFTYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRVSGDRYTLNWLEKFMHRNDMEDGPNLKGN 306
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.630e-59 Identity = 113/258 (43.80%), Postives = 154/258 (59.69%), Query Frame = 2
Query: 449 RAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLN----------------NTSSPYRGKNYKL--------------------------LLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHRNDMEDGPNLKVN 1096
R+ KN+L+ + ASV YYW+EFRD+L P+W+K+F ++ +GW LG L+R EPEE+ VR+++QRP+GGSGNNP+L R MEY VLIEP +IA ++M VREQ+++EWI+DL L+ EN+E+ RH D+L +D++ R+LVFDHDP T PYRGKNY+ LL M+T+ AVR Y +ELR SG RY NWLE+FM ++ G LK N
Sbjct: 63 RSVKNLLAVQASASVQYYWMEFRDELQPRWLKEFEEAGHNVGQVGWDHFLGSLMRTEPEEVTVRKMAQRPKGGSGNNPFLSDTRHAMEYTVLIEPFQIAKRIMTVREQLAQEWIKDLELVETENAELLRHHVDTLSMDAKQADSSRQLVFDHDPCAVEGEVLXXXXXXXXXYGTKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFM----LKGGKGLKGN 316
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A836CAL6_9STRA (Alpha-type protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL6_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.370e-54 Identity = 98/228 (42.98%), Postives = 159/228 (69.74%), Query Frame = 2
Query: 449 RAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLN-NTSSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHR-------ND----MEDGPNLKVN 1096
++ +N+L+ + A+V +YWLEFRD+L P W+K+F + ++ ++GW L L+R+EPE + V++ +QRP+GGSGNNP+L NRTQ+EY V+++P +IA K+M+VREQ+++EW++DL L+ EN E+ RH +D L ++++ R R+L F +DP N SP +NY+ L++++TK A+R Y +ELR++G RY NWLE+F+ + ND M +GP + +N
Sbjct: 409 QSLRNLLAVRASATVQHYWLEFRDELQPTWLKEFEEADHNVGEVGWDGFLTALMRSEPESITVKKKAQRPRGGSGNNPFLSDNRTQIEYTVVVKPYEIAKKIMKVREQLAQEWMRDLQLMDQENHELLRHHDDLLVMNADEADRARQLFFYNDPWGTNAKSPLHQQNYRELIELVTKVALRRYETELRMTGQRYHANWLERFLVKAGDNLVGNDLMEAMLEGPMMMIN 636
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: D7FSH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH1_ECTSI) HSP 1 Score: 144 bits (364), Expect = 3.210e-36 Identity = 80/213 (37.56%), Postives = 134/213 (62.91%), Query Frame = 2
Query: 437 ELKARAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVER--HREDSLCLDSESKKR--DRKLVFDHDPLNNTSSPYRGKN-YKLLLDMITKAAVRAYRSELRISGDRYTLNWLEKFMHR 1060
E A+ ++++ +++ + YW+E R ++ +W+ ++ G ++D+GWH +LRA PE++VV++L + P+GGSGNNP+L A+R +EYN IEP IA ++M++REQ++ + DL ISAEN+ ++ H E L D R K + D DP + T +P R ++ YK L+++T A++R ++ELRI GD TL+WL++F R
Sbjct: 74 EFYAKRLLDLITHNALLTANTYWMELRGNMYIEWLNRYIEERGGVEDVGWHAFFAGMLRAPPEDVVVKKLIKSPRGGSGNNPFL-ADRKPVEYNETIEPTTIARRLMEIREQVAEQLGSDLQQISAENARLQADYHYESELGPDRAQALRLSSLKPMTDVDPSSGTGNPPRRRSTYKDALELVTAASMRRVKAELRIRGDMVTLDWLDRFSSR 285
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A835Z7Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q1_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.600e-31 Identity = 75/218 (34.40%), Postives = 123/218 (56.42%), Query Frame = 2
Query: 449 RAAKNMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDI---GWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSE-----------VERHREDSLCLDSESKKRDR----KLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEK 1048
R KN+L+E S+ + +YYWLE R ++ ++M +F G + GW L LL + PEE+++ ++ ++P+GGSG NPYL A + + Y +IEP + +++ +R Q++ E DL LI +EN V++ +D L + R R + V D D +N+T +PYR Y +L ++TK ++ Y+ ELRI GD++TL WL+K
Sbjct: 10 RRLKNVLTEKSLQTAMYYWLELRGNMYSEYMARFTEGEGGGGSVVARGWRTFLSNLLSSPPEEVIIEKVVKKPRGGSGTNPYLAARKV-VSYTEVIEPMTLGRRILDIRAQLAAELFHDLELIESENERXXXXXXXXXXXVQQFYQDELRYGIKEATRLRLRTWQPVVDTDAINSTDTPYRSSLYLAVLALVTKVSLERYKKELRIVGDKHTLAWLDK 226
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A7S0M0P7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M0P7_9CRYP) HSP 1 Score: 77.4 bits (189), Expect = 1.170e-12 Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 2
Query: 461 NMLSESSVASVVYYWLEFRDDLTPQWMKQFAYRNGDIQDI-------GWHQHLGLLLRAEPEEMVVRRL-SQRPQGGSGNNPYLKANRTQM-EYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKR-----------DRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAA 982
++L + +V + +YY+ EFRD QW++ F G ++D+ G ++L +L++ PE +++ R GGS NNP+LK + YN I PQKI ++ +REQ+ EWI DL+LI +N++ ++ +L +E + D + N+ S+P R KNY D++ KAA
Sbjct: 58 DLLCQRAVQTQLYYFAEFRDGFKRQWLENFRGHQG-LKDVHTFGALNGAKEYLEQMLQSPPESHEIKQQWGNRFAGGSKNNPFLKPPEERFTSYNETIAPQKICKGILDIREQLVAEWIDDLALIPLDNAQFIHDQQQNLSSANEEEASGGTAEQGYHAYDSYIAQSMVMANSASTPLRMKNY----DVLKKAA 246
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A7S0UCD9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCD9_HEMAN) HSP 1 Score: 70.1 bits (170), Expect = 1.200e-9 Identity = 63/196 (32.14%), Postives = 98/196 (50.00%), Query Frame = 2
Query: 515 RDDLTPQWMKQFAYRNGDIQDIG-------WHQHLGLLLRAEPEEMVV---RRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEV-----ERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRI-SGDRYTLNWLEKFM 1054
RD +T W+ ++ G + G W ++ LLRA E +VV RR + G SGNNPYLK + +ME I P+++A ++M VRE+ISREWI L L+ EN EV E+ R DS++ + +L + DP + S ++G +Y L+ + T A + L S + +LE+ +
Sbjct: 98 RDQITADWLAEWNEHEGIERYHGLNGLQMDWRDYINDLLRAPGETLVVEFKRRGNSGHGGWSGNNPYLKDHVMEME--TPINPRQLAERLMAVREEISREWIDMLPLLQKENEEVWRSWFEKVRSKDGATDSQANLQLPQLE-NFDPTHLQGSLFQGGDYDLIKTLATLCAFDRVKQSLETGSAGKPQAEFLERML 290
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A1Z5KEZ6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEZ6_FISSO) HSP 1 Score: 67.0 bits (162), Expect = 1.520e-8 Identity = 66/246 (26.83%), Postives = 117/246 (47.56%), Query Frame = 2
Query: 458 KNMLSESSVASVVYYWLEFRDDLTPQWMKQ-FAYRN-------GDIQDIGWHQHLGLL--LRAEPEEMVVRRLSQRPQGGSG---NNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEV----------ERHREDSLCLDSESKKRDRKLV-------------FDHDP---LNNT-------SSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLN--WLEKF 1051
KN L++ ++ S ++ ++ RD T +WM+ + +RN G W +L + +P++ V+ + +R +G G NNPYL+ +E+ + I+P +AS+++ VREQI+REW++DL + N ++ R E S +S++ +LV FD + L +T SSP R N+ LL ++T+ ++ E R SGD ++ WL+ F
Sbjct: 81 KNFLTQRAIQSFIFLLVQCRDPHTVRWMENTYEFRNMESYHGTGAFNLTKWKTWDSILDDMLHQPKDCVIVQAKRRGKGHGGWSANNPYLEERF--VEFRIDIDPVSLASRILSVREQIAREWMEDLVTLRTANDQILDSYYDMGRAAREDESSSSSSKDSEENVEQLVTPYSGIDEKQRRVFDRNAMLMLTSTMIFKAFASSPQRQGNFDLLYLLLTQESLHRVLREYRESGDEREVSYEWLKGF 324
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: A0A1Z5JVQ5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ5_FISSO) HSP 1 Score: 65.9 bits (159), Expect = 3.400e-8 Identity = 66/241 (27.39%), Postives = 117/241 (48.55%), Query Frame = 2
Query: 458 KNMLSESSVASVVYYWLEFRDDLTPQWMKQ-FAYRN-------GDIQDIGWHQHLGLL--LRAEPEEMVVRRLSQRPQGGSG---NNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEV--------ERHRED-SLCLDSESKKRD---------RKLVFDHDP---LNNT-------SSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLN--WLEKF 1051
KN L++ ++ S ++ ++ RD T +W++ + +RN G W +L + +P++ V+ + +R +G G NNPYL+ +E+ + I+P +AS+++ VREQI+REW +DL + N ++ RED S L E+ ++ VFD + L +T SSP R N+ LL ++T+ ++ E R SGD ++ WL++F
Sbjct: 68 KNFLTQRAIQSFIFLLVQCRDPHTVRWLENTYEFRNMESYHGTGAFNLTKWKTWDSILDDMLHQPKDCVIVQAKRRGRGHGGWSANNPYLEERF--VEFRIDIDPVSLASRILSVREQIAREWREDLVTLRTANDQILDSYYDMGRAAREDESSSLQEETNVEQLVTPGVDEKQRRVFDRNAMLMLTSTMIFKAFASSPQRQGNFDLLYLLLTQESLHRVLREYRKSGDEREVSYEWLKEF 306
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Match: L1IYU5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IYU5_GUITC) HSP 1 Score: 63.2 bits (152), Expect = 7.970e-8 Identity = 51/167 (30.54%), Postives = 77/167 (46.11%), Query Frame = 2
Query: 593 HLGLLLRAEPEEMVVR-RLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSE--VERHREDSLCLDSESKKRDRKLVFDHDPLNNT------------SSPYRGKNYKLLLDMITKAAVRAYRSELRISGDRYTLNWLEK 1048
+L +L + PEE+ V+ R R GGS +NPYLK Y I PQKI +M++REQ+ EW+ DL+++ E+ ++ H E+ L R + H+ + T SSP RG+N+ +L + T AV+ L WL K
Sbjct: 6 YLEKMLHSPPEEIEVQMRWGNRYGGGSKDNPYLKDTPRFNTYTETIHPQKICKGLMEIREQLLSEWVNDLAIVQHEDHLFWIQVHEEEELQRAENITSRKKTSETGHEDGDMTDLVLIGTRGDYESSPLRGRNFDVLKRLSTYIAVKKLLGRKGDGNSESNLKWLGK 172 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13497.2608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13497.2608.1 >prot_E-fasciculatus_F_contig13497.2608.1 ID=prot_E-fasciculatus_F_contig13497.2608.1|Name=mRNA_E-fasciculatus_F_contig13497.2608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=241bp MATSSARGPPGDGEDARSPDELKARAAKNMLSESSVASVVYYWLEFRDDLback to top mRNA from alignment at E-fasciculatus_F_contig13497:1253..3262+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13497.2608.1 ID=mRNA_E-fasciculatus_F_contig13497.2608.1|Name=mRNA_E-fasciculatus_F_contig13497.2608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2010bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13497:1253..3262+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13497:1253..3262+ >mRNA_E-fasciculatus_F_contig13497.2608.1 ID=mRNA_E-fasciculatus_F_contig13497.2608.1|Name=mRNA_E-fasciculatus_F_contig13497.2608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1446bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13497:1253..3262+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |