mRNA_E-fasciculatus_F_contig13486.2606.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 332 bits (852), Expect = 5.010e-109 Identity = 164/234 (70.09%), Postives = 186/234 (79.49%), Query Frame = 1
Query: 61 AYDGGDCCSCTCQSPLGDDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCT--------GDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
AYDGGDCCSCTC+SP DD+ C FACIDP+AACV+DDDITVDMFENC YP+ IG+G CDE NN E CGYDGGDCC+CTC D +Y+C +F+CIDPSAPCV+DDDITVDM ENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTCES DDD++C E FDCKDP+A+CFGEE T G+ D ST EFVPWE+TE LPTV+GAVEVGTKTEV VS+
Sbjct: 146 AYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPT-GSDDFSTDDQPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSS 375
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.230e-103 Identity = 156/231 (67.53%), Postives = 181/231 (78.35%), Query Frame = 1
Query: 61 AYDGGDCCSCTCQSPLGDDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTG--DDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQ---EFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
AYDGGDCC+CTCQ+ + DD+ FACIDP+AACVNDDDITVDMF NC YP+ +GDG CD+ NN E CGYDGGDCC+CTC D++Y C +FSCIDPSAPCVNDDD+T+DM ENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTC+S DDD++C E +FDC+DPSA+CFGE TT GS D + EFV WE+T+ LPTV AVEVGTKTEV VSA
Sbjct: 372 AYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCENERDEDYRCMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTT-----GSDDFSFHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSA 597
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 300 bits (769), Expect = 5.580e-96 Identity = 149/217 (68.66%), Postives = 172/217 (79.26%), Query Frame = 1
Query: 112 DDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCT--------GDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
DD++C FACIDP+AACV+DDDITVDMFENC Y L +GDG CDE NN E CGYDGGDCC+CTC D +Y+C++FSCIDP+A CV+DDDITVDMFENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTC+S DDD+ C E FDC+DP+A+CFGEE+T G+ D ST EFVPWE+TE LPTV+GAVEVGTKTEV VSA
Sbjct: 63 DDWSCTRFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEEST-GSDDYSTDDEPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSA 275
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 300 bits (769), Expect = 5.540e-93 Identity = 149/222 (67.12%), Postives = 174/222 (78.38%), Query Frame = 1
Query: 97 QSPLGDDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCT--------GDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
Q+ DD++C FACIDP+AACV+DDDITVDM ENC YPL +GDG CD+ NN E CGYDGGDCC+CTC D +Y+C++FSCIDP+A CV+DDDITVDMFENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTC+S DDD+ C E FDC+DP+A+CFGEE+T G+ D ST EFVPWE+TE LPTV+GAVEVGTKTEV VSA
Sbjct: 420 QNIYDDDWSCTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEEST-GSDDYSTDDEPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSA 637
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 281 bits (718), Expect = 1.440e-91 Identity = 133/158 (84.18%), Postives = 140/158 (88.61%), Query Frame = 1
Query: 265 GYDGGDCCQCTCTGDDE-YNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCGEGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
GYDGGDCC+CTC GDD+ Y C QFSCIDP+APCVNDDDITVDMF+NCGYVSGIGDGWCD +NNKE CGYDGGDCCSCTCESV DDD+TCGE AFFDCKDPSAACFGEET GNGD STG DTE EFVPWEQTEPLPTV+ AVEVGTKTEVSVSA
Sbjct: 9 GYDGGDCCECTCEGDDDDYKCMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSA 166
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 276 bits (705), Expect = 3.110e-87 Identity = 140/233 (60.09%), Postives = 171/233 (73.39%), Query Frame = 1
Query: 64 YDGGDCCSCTCQSPLGDDY------AC-DSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGDDEYNCKQ-FSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
YDGGDCC CTC+ P DD+ AC + FACIDP A CVNDDDITVD+ E+C +G+GDG+CD DNN C YDGGDCC+CTC +++ + F+CIDP APCV+DD +TVDM +NC Y+ +G+GWCD++NN E C YDGGDCC CTCES +DD+TC E F+CKDP+A+CFGEETT G+ D ST EFVPWE+TE LPTV+GAVEVGTKTEV VS+
Sbjct: 125 YDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDA-VGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETT-GSDDFSTDDQPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSS 352
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 231 bits (589), Expect = 4.620e-72 Identity = 111/191 (58.12%), Postives = 134/191 (70.16%), Query Frame = 1
Query: 64 YDGGDCCSCTCQSPLGDDYACDS----FACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTG--DDEYNCKQFS-CIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFT-------CGEGAFFDCKDPSAACFGEETTT 594
+DGGDCC CTC S DDY+C S FAC+DP A CV+DDDIT++ NC +P GDG CD++NN E CGYDGGDCC+CTC DD+Y+C S CIDPSAPCV+DDD+TVDM ENCGYV +G+GWCD++NN E CGYDGGDCC CTC+ + DD T CG G F C DP+A C ++ T
Sbjct: 6 FDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNC-FPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNG--FACIDPNAPCVNDDDIT 193
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 234 bits (598), Expect = 5.260e-70 Identity = 142/283 (50.18%), Postives = 160/283 (56.54%), Query Frame = 1
Query: 64 YDGGDCCSCTCQSP-LGDDY------------------ACDS-FACIDPDAACVNDDDITV--------------------------------DMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGD--DEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDN--NKEECGYDGGDCCSCTCESVSD--DDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
YDGGDCC CTC +P DD+ AC FACIDP+AACVNDDDITV DM ENC YP G+GDG+C++ NN E C YDGGDCC CTC D D++ C F+CIDP A CVNDDDITVDMF NC Y IG+GW GYDGGDCCSCTC++ D DD++C E DCKDP+A+CFGE TT D T T EFV WE+TE LPTV AVEVGTKTEV VSA
Sbjct: 191 YDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTT--GSDDFTFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSA 471
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 222 bits (566), Expect = 3.570e-65 Identity = 124/236 (52.54%), Postives = 149/236 (63.14%), Query Frame = 1
Query: 64 YDGGDCCSCTCQSP---LGDDYACDS----FACIDPDAACVNDDDITVDMFENCG-YPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGDDEYNCK--QFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCE--SVSDDDFTCGEGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
YDGGDCCSCTCQ P GDD + S FACIDPDA CVNDDDITVDM + CG +P+ GDG CD+DNN +ECGYD GDCC CTC D Y C F C+DPSA CV+DD + + ++CG + +G+CD DNNKEEC YDGGDCC CTCE + D +C G FDC+DP+A CF EE T + G +++ + L AVEVGTKT+VSVSA
Sbjct: 266 YDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCV-DGTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCTSG--FDCQDPTAPCFDEEPTLPEKEDDDGSMSYDFLDEDDL-------LTVGTDAVEVGTKTDVSVSA 491
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 199 bits (506), Expect = 1.390e-58 Identity = 104/194 (53.61%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 61 AYDGGDCCSCTCQSPLGDDY----ACDS-----FACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGDD---EYNCK--QFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSD--DDFTCGEGA---FFDCKDPSAACFGEE 585
AYDGGDCC CTC Y C + FACIDPDA CV+DD +T +M + C IG+G+CD+ NN+ EC YDGGDCC+CTC D EY C+ F+CIDP A CV+DDD T + +E+CG+V+ IGDG CDD+NNKEECG+DGGDCC CTC S D+ C E FDC D SA+C+GEE
Sbjct: 181 AYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTGQ-IGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVVPSSAWSDYACQEVYNINSFDCLDTSASCYGEE 373 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13486.2606.1 >prot_E-fasciculatus_F_contig13486.2606.1 ID=prot_E-fasciculatus_F_contig13486.2606.1|Name=mRNA_E-fasciculatus_F_contig13486.2606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=245bp PRPLCPSLSVLPRSCPRTPAAYDGGDCCSCTCQSPLGDDYACDSFACIDPback to top mRNA from alignment at E-fasciculatus_F_contig13486:1..2456- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13486.2606.1 ID=mRNA_E-fasciculatus_F_contig13486.2606.1|Name=mRNA_E-fasciculatus_F_contig13486.2606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2456bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13486:1..2456- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13486:1..2456- >mRNA_E-fasciculatus_F_contig13486.2606.1 ID=mRNA_E-fasciculatus_F_contig13486.2606.1|Name=mRNA_E-fasciculatus_F_contig13486.2606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1470bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13486:1..2456- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |