mRNA_E-fasciculatus_F_contig13486.2606.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13486.2606.1
Unique NamemRNA_E-fasciculatus_F_contig13486.2606.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 5.010e-109
Identity = 164/234 (70.09%), Postives = 186/234 (79.49%), Query Frame = 1
Query:   61 AYDGGDCCSCTCQSPLGDDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCT--------GDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            AYDGGDCCSCTC+SP  DD+ C  FACIDP+AACV+DDDITVDMFENC YP+ IG+G CDE NN E CGYDGGDCC+CTC          D +Y+C +F+CIDPSAPCV+DDDITVDM ENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTCES  DDD++C  E   FDCKDP+A+CFGEE T G+ D ST          EFVPWE+TE LPTV+GAVEVGTKTEV VS+
Sbjct:  146 AYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPT-GSDDFSTDDQPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSS 375          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.230e-103
Identity = 156/231 (67.53%), Postives = 181/231 (78.35%), Query Frame = 1
Query:   61 AYDGGDCCSCTCQSPLGDDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTG--DDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQ---EFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            AYDGGDCC+CTCQ+ + DD+    FACIDP+AACVNDDDITVDMF NC YP+ +GDG CD+ NN E CGYDGGDCC+CTC    D++Y C +FSCIDPSAPCVNDDD+T+DM ENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTC+S  DDD++C  E  +FDC+DPSA+CFGE TT     GS       D +    EFV WE+T+ LPTV  AVEVGTKTEV VSA
Sbjct:  372 AYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCENERDEDYRCMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTT-----GSDDFSFHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSA 597          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 5.580e-96
Identity = 149/217 (68.66%), Postives = 172/217 (79.26%), Query Frame = 1
Query:  112 DDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCT--------GDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            DD++C  FACIDP+AACV+DDDITVDMFENC Y L +GDG CDE NN E CGYDGGDCC+CTC          D +Y+C++FSCIDP+A CV+DDDITVDMFENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTC+S  DDD+ C  E   FDC+DP+A+CFGEE+T G+ D ST          EFVPWE+TE LPTV+GAVEVGTKTEV VSA
Sbjct:   63 DDWSCTRFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEEST-GSDDYSTDDEPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSA 275          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 5.540e-93
Identity = 149/222 (67.12%), Postives = 174/222 (78.38%), Query Frame = 1
Query:   97 QSPLGDDYACDSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCT--------GDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            Q+   DD++C  FACIDP+AACV+DDDITVDM ENC YPL +GDG CD+ NN E CGYDGGDCC+CTC          D +Y+C++FSCIDP+A CV+DDDITVDMFENCGYVSGIG+GWCD +NNKEECGYDGGDCCSCTC+S  DDD+ C  E   FDC+DP+A+CFGEE+T G+ D ST          EFVPWE+TE LPTV+GAVEVGTKTEV VSA
Sbjct:  420 QNIYDDDWSCTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEEST-GSDDYSTDDEPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSA 637          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 1.440e-91
Identity = 133/158 (84.18%), Postives = 140/158 (88.61%), Query Frame = 1
Query:  265 GYDGGDCCQCTCTGDDE-YNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCGEGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            GYDGGDCC+CTC GDD+ Y C QFSCIDP+APCVNDDDITVDMF+NCGYVSGIGDGWCD +NNKE CGYDGGDCCSCTCESV DDD+TCGE AFFDCKDPSAACFGEET  GNGD STG     DTE EFVPWEQTEPLPTV+ AVEVGTKTEVSVSA
Sbjct:    9 GYDGGDCCECTCEGDDDDYKCMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSA 166          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 3.110e-87
Identity = 140/233 (60.09%), Postives = 171/233 (73.39%), Query Frame = 1
Query:   64 YDGGDCCSCTCQSPLGDDY------AC-DSFACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGDDEYNCKQ-FSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            YDGGDCC CTC+ P  DD+      AC + FACIDP A CVNDDDITVD+ E+C   +G+GDG+CD DNN   C YDGGDCC+CTC  +++   +  F+CIDP APCV+DD +TVDM +NC Y+  +G+GWCD++NN E C YDGGDCC CTCES  +DD+TC  E   F+CKDP+A+CFGEETT G+ D ST          EFVPWE+TE LPTV+GAVEVGTKTEV VS+
Sbjct:  125 YDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDA-VGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETT-GSDDFSTDDQPMS---YEFVPWEETEALPTVDGAVEVGTKTEVGVSS 352          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 4.620e-72
Identity = 111/191 (58.12%), Postives = 134/191 (70.16%), Query Frame = 1
Query:   64 YDGGDCCSCTCQSPLGDDYACDS----FACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTG--DDEYNCKQFS-CIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSDDDFT-------CGEGAFFDCKDPSAACFGEETTT 594
            +DGGDCC CTC S   DDY+C S    FAC+DP A CV+DDDIT++   NC +P   GDG CD++NN E CGYDGGDCC+CTC    DD+Y+C   S CIDPSAPCV+DDD+TVDM ENCGYV  +G+GWCD++NN E CGYDGGDCC CTC+ +  DD T       CG G  F C DP+A C  ++  T
Sbjct:    6 FDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNC-FPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNG--FACIDPNAPCVNDDDIT 193          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 5.260e-70
Identity = 142/283 (50.18%), Postives = 160/283 (56.54%), Query Frame = 1
Query:   64 YDGGDCCSCTCQSP-LGDDY------------------ACDS-FACIDPDAACVNDDDITV--------------------------------DMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGD--DEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDN--NKEECGYDGGDCCSCTCESVSD--DDFTCG-EGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            YDGGDCC CTC +P   DD+                  AC   FACIDP+AACVNDDDITV                                DM ENC YP G+GDG+C++ NN E C YDGGDCC CTC  D  D++ C  F+CIDP A CVNDDDITVDMF NC Y   IG+GW            GYDGGDCCSCTC++  D  DD++C  E    DCKDP+A+CFGE TT    D  T       T  EFV WE+TE LPTV  AVEVGTKTEV VSA
Sbjct:  191 YDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTT--GSDDFTFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSA 471          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 3.570e-65
Identity = 124/236 (52.54%), Postives = 149/236 (63.14%), Query Frame = 1
Query:   64 YDGGDCCSCTCQSP---LGDDYACDS----FACIDPDAACVNDDDITVDMFENCG-YPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGDDEYNCK--QFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCE--SVSDDDFTCGEGAFFDCKDPSAACFGEETTTGNGDGSTGXXXXXDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA 735
            YDGGDCCSCTCQ P    GDD +  S    FACIDPDA CVNDDDITVDM + CG +P+  GDG CD+DNN +ECGYD GDCC CTC  D  Y C    F C+DPSA CV+DD  +  + ++CG    + +G+CD DNNKEEC YDGGDCC CTCE   + D   +C  G  FDC+DP+A CF EE T    +   G       +++ +       L     AVEVGTKT+VSVSA
Sbjct:  266 YDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCV-DGTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCTSG--FDCQDPTAPCFDEEPTLPEKEDDDGSMSYDFLDEDDL-------LTVGTDAVEVGTKTDVSVSA 491          
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.390e-58
Identity = 104/194 (53.61%), Postives = 127/194 (65.46%), Query Frame = 1
Query:   61 AYDGGDCCSCTCQSPLGDDY----ACDS-----FACIDPDAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTCTGDD---EYNCK--QFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNNKEECGYDGGDCCSCTCESVSD--DDFTCGEGA---FFDCKDPSAACFGEE 585
            AYDGGDCC CTC       Y     C +     FACIDPDA CV+DD +T +M + C     IG+G+CD+ NN+ EC YDGGDCC+CTC   D   EY C+   F+CIDP A CV+DDD T + +E+CG+V+ IGDG CDD+NNKEECG+DGGDCC CTC   S    D+ C E      FDC D SA+C+GEE
Sbjct:  181 AYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTGQ-IGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVVPSSAWSDYACQEVYNINSFDCLDTSASCYGEE 373          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13486.2606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3F4_ECTSI5.010e-10970.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE1.230e-10367.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB04_9PHAE5.580e-9668.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXR2_9PHAE5.540e-9367.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S3_ECTSI1.440e-9184.18LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4F9_ECTSI3.110e-8760.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S4_ECTSI4.620e-7258.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI5.260e-7050.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTT4_9PHAE3.570e-6552.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP6_ECTSI1.390e-5853.61Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13486contigE-fasciculatus_F_contig13486:1..2456 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.1
Seed ortholog evalue1.1e-26
Seed eggNOG ortholog2880.D7FX77
EggNOG OGs2E9KF@1,2SFXU@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNotch domain
Ec32 orthologEc-23_001750.1
Exons5
Model size735
Cds size735
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13486.2606.1prot_E-fasciculatus_F_contig13486.2606.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13486 1..2456 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927847.6222925-CDS-E-fasciculatus_F_contig13486:0..2721622927847.6222925-CDS-E-fasciculatus_F_contig13486:0..272Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 1..272 -
1695995721.1317-CDS-E-fasciculatus_F_contig13486:0..2721695995721.1317-CDS-E-fasciculatus_F_contig13486:0..272Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 1..272 -
1622927847.6338372-CDS-E-fasciculatus_F_contig13486:500..6601622927847.6338372-CDS-E-fasciculatus_F_contig13486:500..660Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 501..660 -
1695995721.144983-CDS-E-fasciculatus_F_contig13486:500..6601695995721.144983-CDS-E-fasciculatus_F_contig13486:500..660Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 501..660 -
1622927847.6450603-CDS-E-fasciculatus_F_contig13486:1143..11811622927847.6450603-CDS-E-fasciculatus_F_contig13486:1143..1181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 1144..1181 -
1695995721.154421-CDS-E-fasciculatus_F_contig13486:1143..11811695995721.154421-CDS-E-fasciculatus_F_contig13486:1143..1181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 1144..1181 -
1622927847.6569877-CDS-E-fasciculatus_F_contig13486:1918..20841622927847.6569877-CDS-E-fasciculatus_F_contig13486:1918..2084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 1919..2084 -
1695995721.163201-CDS-E-fasciculatus_F_contig13486:1918..20841695995721.163201-CDS-E-fasciculatus_F_contig13486:1918..2084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 1919..2084 -
1622927847.6928873-CDS-E-fasciculatus_F_contig13486:2357..24561622927847.6928873-CDS-E-fasciculatus_F_contig13486:2357..2456Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 2358..2456 -
1695995721.173833-CDS-E-fasciculatus_F_contig13486:2357..24561695995721.173833-CDS-E-fasciculatus_F_contig13486:2357..2456Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13486 2358..2456 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13486.2606.1

>prot_E-fasciculatus_F_contig13486.2606.1 ID=prot_E-fasciculatus_F_contig13486.2606.1|Name=mRNA_E-fasciculatus_F_contig13486.2606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=245bp
PRPLCPSLSVLPRSCPRTPAAYDGGDCCSCTCQSPLGDDYACDSFACIDP
DAACVNDDDITVDMFENCGYPLGIGDGHCDEDNNTEECGYDGGDCCQCTC
TGDDEYNCKQFSCIDPSAPCVNDDDITVDMFENCGYVSGIGDGWCDDDNN
KEECGYDGGDCCSCTCESVSDDDFTCGEGAFFDCKDPSAACFGEETTTGN
GDGSTGSSSDSDTEQEFVPWEQTEPLPTVEGAVEVGTKTEVSVSA
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mRNA from alignment at E-fasciculatus_F_contig13486:1..2456-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13486.2606.1 ID=mRNA_E-fasciculatus_F_contig13486.2606.1|Name=mRNA_E-fasciculatus_F_contig13486.2606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2456bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13486:1..2456- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCGCCCTCTTTGCCCCTCTCTCTCTGTCCTTCCACGTTCCTGTCCTCG AACTCCCGCAGCCTACGATGGCGGGGACTGTTGCTCTTGCACCTGTCAGG TATGGACCACTTACGATAGATCGGTCGTCTACAAGTGATGAGGACCTCGC GTTGTTCGTAGATGTGGCTTATCTTCACTGCTCCCGTTTTTTTTCGTTCG AGGGTTCCGACCGAAGTTTCGGAGAGTGAACCCCTTCGTTGACGCAGCCA TGATTTCGTTTCCCACCCCCTACTGTTGGGGATTGTTGCAATATCATGAC CACCCTTGGAGTCTTGTCCCCCCATCTGAACAAGAATGCCTCCCCCTTTT TCGCCTCTCCCGTACGCGCCAGAGCCCGCTCGGCGATGACTACGCTTGCG ACAGCTTCGCCTGCATCGACCCTGACGCAGCCTGCGTTAACGACGACGAC ATCACCGTCGACATGTTCGAGAACTGCGGCTACCCGTTGGGCATTGGAGA CGGTCACTGCGACGAGGACAACAACACCGAGGAGTGCGGTAGGTTTCCCC GTCCTGTATACCACGTGATGTTCTTCGTTCTGTCGTAGTCCCGGAGAGGT CCTCGGAAGGCTCAGGCTTTCCATCGCACCGCAAACACACACACATCATG CAGAATAGCGTACGTCTTGCACTCGATGGACAAGCCACATATAATAAATG CACCTCCACCGCAAGCACACACATATCATGCAGAGTAGCGTACGCCTTGC CCTAGATGGAGAAGCCACATACGTGCACCTTGACGACGTTCATTCCCCCT CCTTTTGCTCCCAACTCCCGTGCACCAGCTTCCAGCGCGTGAGCGTGGTG ACACTGATATTTCAGTAGTGGGTTCTAGGGGTCTCGCCGGAAATTCGCTT TGTAGCGGTATCTTCGGGCTCTGAACACAACACCCTCCCCTGAAAAAAAA CAAAAAACAAGGCAACATTCGAGATCATGGCCGAACGGTTGCTCGGCCTG GAAGCTAACCAGATGTTGTTTTGAACCCTCTCGTTCTCCAGACCAAAAAC CTCAGCATCGTGATAGACCAGAAATGTTTGCGCGAAAACCGCGCTCTCAC GTTGGCATACTATAGGACGAATCGCTCACTTCCCCTCGTTGAAACTGGCT CGACGGCTCGTACATCGTGACCTCAGGCGTGCCCCTAACCACTGACGCTT GTTGCTCCTTCGTTTGTCGTTGGTGTCGGCGTCGGCGTCGGCGTCGTCGT TGTCGTTCTCACCCCGATTCGCCAGGCTACGACGGCGGCGACTGCTGCCA GTGCACGTGCACGGTGAGGACCGCGGCTCAAGAAGCACTTGCAGCGCATG GGCCCTCGAAGGGCGAATAGTATTGCCTTTCGTTTCCTCGACAGTTCTCC CCCTGAATCTACCCCGATGTCATCCATTTGGGAACAGTAGTGAGCGATTT TTTCGTGTTCGTATATAATGGTTTGCTGCGAAATTGCACATACCGGGCGC AACGCACTTGGGTCCCTCTCGACGAGCTCATCCCCTCTGCCTTCCTGCAG TCTAATTTTCTCGTGTTGTCGACTCAAATTACTGCCTTTGTGGAACCTGC GGGCGTGTAGGCTCGACGGCTTCAAACGACAACGTCGGGTCGAATCTGCA AAAGACCTAAACAGCCCCTCTGATGGTTACTTGTTGCCCCCATGCCCACT CCACCAAAGTCCCCCAGAGTTGCCGCTAGTAGCGGCCGGTCTCTCATGTT CCACACCATTTCTGCTTGCTTGTACTCCTCCTTCGCCTGTCACAAGGGAG ACGACGAGTACAACTGCAAGCAGTTTTCTTGCATCGACCCCAGCGCGCCC TGCGTAAACGATGACGACATCACCGTGGACATGTTCGAGAACTGCGGCTA CGTCTCGGGGATAGGCGACGGGTGGTGCGACGACGACAACAACAAGGAGG AATGCGGTGAGACACACCAACAGCCGGAATGCTTCATGCCTCATGCACGG CGAGGCACAGCAGAGAGAACCGTTTCTCCCTCCAACTGCGTGATGAAAGA ATGCACCTGTCGACATAGGGCTCGTCGTTGCTGCGACCCGGCATGATAAC TTGTTGCCGTGTGTCAGTCTCCCTGGTTAAGGGGTCAAAACCAGCCGTGA TACTTAAGCGCTGTTACCGCTTGCCCTCCCGCAGGCTACGACGGCGGCGA CTGCTGTTCGTGCACGTGCGAGAGCGTCTCGGACGACGACTTCACCTGCG GCGAAGGCGCCTTCTTCGACTGCAAAGACCCGAGCGCGGCGTGCTTCGGC GAAGAAACCACCACGGGCAACGGCGATGGCTCCACCGGCAGCTCGTCCGA TTCCGACACCGAGCAAGAATTCGTTCCCTGGGAACAGACGGAGCCGCTTC CGACGGTCGAAGGCGCTGTGGAGGTGGGTACCAAGACCGAGGTAAGCGTG TCGGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13486:1..2456-

>mRNA_E-fasciculatus_F_contig13486.2606.1 ID=mRNA_E-fasciculatus_F_contig13486.2606.1|Name=mRNA_E-fasciculatus_F_contig13486.2606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1470bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13486:1..2456- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCGCCCTCTTTGCCCCTCTCTCTCTGTCCTTCCACGTTCCTGTCCTCG
AACTCCCGCAGCCTACGATGGCGGGGACTGTTGCTCTTGCACCTGTCAGC
CCCGCCCTCTTTGCCCCTCTCTCTCTGTCCTTCCACGTTCCTGTCCTCGA
ACTCCCGCAGCCTACGATGGCGGGGACTGTTGCTCTTGCACCTGTCAGAG
CCCGCTCGGCGATGACTACGCTTGCGACAGCTTCGCCTGCATCGACCCTG
ACGCAGCCTGCGTTAACGACGACGACATCACCGTCGACATGTTCGAGAAC
TGCGGCTACCCGTTGGGCATTGGAGACGGTCACTGCGACGAGGACAACAA
CACCGAGGAGTGCGAGCCCGCTCGGCGATGACTACGCTTGCGACAGCTTC
GCCTGCATCGACCCTGACGCAGCCTGCGTTAACGACGACGACATCACCGT
CGACATGTTCGAGAACTGCGGCTACCCGTTGGGCATTGGAGACGGTCACT
GCGACGAGGACAACAACACCGAGGAGTGCGGCTACGACGGCGGCGACTGC
TGCCAGTGCACGTGCACGGCTACGACGGCGGCGACTGCTGCCAGTGCACG
TGCACGGGAGACGACGAGTACAACTGCAAGCAGTTTTCTTGCATCGACCC
CAGCGCGCCCTGCGTAAACGATGACGACATCACCGTGGACATGTTCGAGA
ACTGCGGCTACGTCTCGGGGATAGGCGACGGGTGGTGCGACGACGACAAC
AACAAGGAGGAATGCGGGAGACGACGAGTACAACTGCAAGCAGTTTTCTT
GCATCGACCCCAGCGCGCCCTGCGTAAACGATGACGACATCACCGTGGAC
ATGTTCGAGAACTGCGGCTACGTCTCGGGGATAGGCGACGGGTGGTGCGA
CGACGACAACAACAAGGAGGAATGCGGCTACGACGGCGGCGACTGCTGTT
CGTGCACGTGCGAGAGCGTCTCGGACGACGACTTCACCTGCGGCGAAGGC
GCCTTCTTCGACTGCAAAGACCCGAGCGCGGCGTGCTTCGGCGAAGAAAC
CACCACGGGCAACGGCGATGGCTCCACCGGCAGCTCGTCCGATTCCGACA
CCGAGCAAGAATTCGTTCCCTGGGAACAGACGGAGCCGCTTCCGACGGTC
GAAGGCGCTGTGGAGGTGGGTACCAAGACCGAGGTAAGCGTGTCGGCCGC
TACGACGGCGGCGACTGCTGTTCGTGCACGTGCGAGAGCGTCTCGGACGA
CGACTTCACCTGCGGCGAAGGCGCCTTCTTCGACTGCAAAGACCCGAGCG
CGGCGTGCTTCGGCGAAGAAACCACCACGGGCAACGGCGATGGCTCCACC
GGCAGCTCGTCCGATTCCGACACCGAGCAAGAATTCGTTCCCTGGGAACA
GACGGAGCCGCTTCCGACGGTCGAAGGCGCTGTGGAGGTGGGTACCAAGA
CCGAGGTAAGCGTGTCGGCC
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