mRNA_E-fasciculatus_F_contig13471.2598.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13471.2598.1
Unique NamemRNA_E-fasciculatus_F_contig13471.2598.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: A0A6H5K8W7_9PHAE (EGF-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8W7_9PHAE)

HSP 1 Score: 697 bits (1799), Expect = 1.090e-246
Identity = 323/340 (95.00%), Postives = 335/340 (98.53%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            +CVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLP+GVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTA+SGTEFW+WDY  N+P++QRYSALSLNFTGQTFALTFTSA+EERFTTIPINLDGDG+TTMPY TA YI+SALEGLPNGVIDSVQVDVAYNATGSVIAGEVIE++PCDELIVVTFDG QVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI
Sbjct:  104 ECVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWSWDYNANNPIVQRYSALSLNFTGQTFALTFTSAKEERFTTIPINLDGDGYTTMPYVTADYIKSALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGAQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 443          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: A0A7S3JQM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQM4_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.200e-69
Identity = 150/371 (40.43%), Postives = 193/371 (52.02%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYT----PNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINL---DGDGFTTMPYETAAYIESALEGLPNGVIDSVQVD----------VAY--------NATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDG------LPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            +C CFEG+ GKGC  M+CPNDCSGHG C + +D  +GV  G +Y         +  L     + AV  +   W  GK R+CRCD GY  +DCS R CP+GNDV+ ERLN V ++KYQKQ   L ++G    G  + + +       NDP + R      +F G++FAL FTS   + +TTIP+ L   DG    T     A  +E+ALE LPN VID V V+           AY        + TGS+ +        C     V F GT V G Q+LLEV    CGDGCTP L+           T++       Y      S+V +   ADY S+ CG RGKCDY+TG C CF GY G  C+TQTALI
Sbjct:   88 ECDCFEGFTGKGCGVMTCPNDCSGHGTCEYLEDYGYGVVWGDYYDGS------IATLTGLGTDAAVIPQPPDWATGKMRICRCDAGYTDLDCSRRMCPKGNDVLDERLNLVTALKYQKQNFTLVAAGAKGDGIVYDDANNVVCNLENDPDIDRPGCWQ-DFVGRSFALKFTSKLNQSYTTIPLVLNVSDGAKINTEMNNFATVVENALESLPNYVIDDVDVECDLIYLQANTTAYRTKTFQPVDGTGSIYSLAAYPSLTC----TVEFIGTTVMGPQNLLEVVADTCGDGCTPMLNNSVNLKTATNITVEDYIGTKDYITDDLFSFVAEDVRADYNSFECGRRGKCDYSTGLCECFEGYTGDRCQTQTALI 447          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: A0A835ZF98_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF98_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.670e-68
Identity = 152/361 (42.11%), Postives = 199/361 (55.12%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCP-----NDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGE-LGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLD-GDGFTTMPYETAAYIESALEGLPNGVIDSVQV-----------DVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHR----SYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTAL 1017
            +C CF GYEGK C RMSCP     NDCSGHGRC+FA+D+P+GVN+GS        T  L   LGD+NGNDA TF Y+ WD  +TR+C CD  +EGVDC  RSCP+G+DVM    ++V S+      + +   G+A +       ++   D V           +   FALTFT+   ER TT PI +D G   TT+    A  +++ALE LP GVID+V V           +  +  +GS +A   + D      I V F G  VQG Q+LLEVEW+ C +GCTP+L G+  S +         + G  R     Y+    +    +Y CGGRGKCDYT+GEC CF G+ GL C  QTAL
Sbjct:  103 ECNCFAGYEGKACGRMSCPMDKDGNDCSGHGRCLFANDVPYGVNVGSA-------TQLLDTFLGDSNGNDAETFTYYNWDNERTRLCVCDAEWEGVDCGKRSCPKGDDVMDTNGDQVQSI------LLIADPGSATA-------NFLAADGV-----------SDAEFALTFTTLTGERLTTGPITIDLGAAATTL----ATDVKTALEALPGGVIDTVDVVATLGMPTWNANTYWTLSGSPLA-PTVTDLNAGVGIYVKFSGKNVQGKQNLLEVEWKECLEGCTPRLAGIQESALALTNARTTGSYGYARVIDTKYLSSTATHVNTAYTCGGRGKCDYTSGECQCFDGFVGLACGEQTAL 427          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: A0A7S0L985_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L985_9EUKA)

HSP 1 Score: 235 bits (599), Expect = 2.010e-67
Identity = 141/344 (40.99%), Postives = 177/344 (51.45%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINL----DGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            +C CF GYEGKGC R SCPNDCSGHGRC + +D+PFG     + +        L +       D  TF Y+GWD  KTR C CDP Y  VDCS R C  GNDVM +R + +   +YQ Q +                 ++  +   L+ Y         +TFALTF S   E FTT+PIN      G G T   +E    IE+ALE LPN VID+V+V    +AT  +                +TF G  VQG Q+LL V    CGDGC+PKL GL L  ++TQ              + ++  AD+ SY CG RGKCDYTTG+C CF GY GL C T   L+
Sbjct:   91 ECECFPGYEGKGCQRTSCPNDCSGHGRCKYIEDMPFGQVQADYQNAVTGIDSFLPQ-------DPHTFPYYGWDSYKTRGCECDPEYGDVDCSKRLCQHGNDVMDQRDDLLDPHQYQVQKL-----------------NFLADQSYLENYQNRD-----RTFALTFKSKLNETFTTLPINFYSDTGGTGGTDGLHEFVLDIENALERLPNRVIDNVEVHAGVDATNHIHVN-------------ITFVGDNVQGPQNLLTVRSYLCGDGCSPKLVGLELE-LETQT-------------ITELTPADFNSYECGRRGKCDYTTGQCQCFAGYTGLSCSTIACLV 378          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: F0YDW6_AURAN (EGF-like domain-containing protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDW6_AURAN)

HSP 1 Score: 227 bits (579), Expect = 2.180e-64
Identity = 139/340 (40.88%), Postives = 184/340 (54.12%), Query Frame = 1
Query:    4 CVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTF-EYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            C CFEGY GKGC   +CPNDCSGHG C +A+D PFG   G +Y  ++N+   LG        D VT  +   WD GK ++C C+PGY  +DCS R CP+GNDV+ ERLN   S  + + A    +S   ++G    NWD     P   +      +F  ++FALTFTS   + +TT P+ L+      +    +  +  AL  LPN VID V VD +       +   +   +P    +V  F G  V G Q+LLEVE   C DGCTPKL+     T      ++P       S+V++  +ADY SY CG RGKCDY+TGEC CF GY G  C+ QTALI
Sbjct:   89 CECFEGYTGKGCGIQTCPNDCSGHGACTYAEDAPFGTVWGDYYTAKSNSLTGLGT-------DPVTLAQAPAWDSGKVKLCVCEPGYTDIDCSRRMCPKGNDVLDERLN--LSNNWARGA----TSIAGFNGQNSDNWD-----PDCFK------DFLNKSFALTFTSKMNQSYTTKPLVLNETNVFNISKAFSGDVRKALVELPNYVIDDVDVDCSLQY----VHQNLTSLYPALSCLVA-FTGDTVMGPQYLLEVETDECLDGCTPKLENPGNVT------SMPDIF----SFVKEQVTADYNSYECGRRGKCDYSTGECECFEGYMGDRCQMQTALI 389          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: A0A482RZM9_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZM9_9ARCH)

HSP 1 Score: 219 bits (558), Expect = 2.490e-62
Identity = 135/340 (39.71%), Postives = 175/340 (51.47%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            +C CF GYEGK C R SCPNDCSGHGRC++ ++LP+G     +           G   D +  D  TF+ + WD  KTR C CDP Y  VDCS R CP G DVM +R +      YQ Q I +  S  +++ +                      +  G TFALTF +   E FTT PI L  DG T    +   ++E ALE LPNGVID+V V  +Y+   +V+             + VTF G  VQG QHLL V+   CGDGC+PKL G+                G++  + QQ  ++D+ SY CG RGKCDY+TG C CF GY G  C T + L+
Sbjct:   32 ECECFPGYEGKACQRSSCPNDCSGHGRCIYMENLPYGAVAPDY-----------GAYTDFSVQDPKTFDNYFWDRSKTRGCLCDPEYGDVDCSKRMCPYGTDVMDQRSDVTVDGLYQVQQIQIKVSTKSFNDS----------------------STAGDTFALTFKTKLNETFTTAPIPLF-DGRTDFR-QFILHVEQALERLPNGVIDNVDVAGSYSVYSNVVN------------LNVTFVGNTVQGPQHLLTVKDYLCGDGCSPKLSGVETHP------------GSNLIFEQQ--ASDFNSYECGRRGKCDYSTGVCNCFAGYSGNTCGTISCLV 310          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: C4B7Q7_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q7_OCHDN)

HSP 1 Score: 211 bits (536), Expect = 1.850e-58
Identity = 133/340 (39.12%), Postives = 167/340 (49.12%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDEL-IVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTAL 1017
            +C CF+GYEGKGC R +CPN CSGHG C + ++L FG     +      +  +  E       D  TF YHGWD  K R C CDP Y  VDCS R CP GNDV+  + N + +  YQ Q I +                       + +   L      QTFALTF S   E FTT PI  D        ++    ++ AL  LPN VID V V  A N            D+  D L + +TF G  VQG Q+LL VE   C DGCTPK+ G+ + T+  Q            S + ++ +ADY S+ CG RGKCDY TG C CFTGY G +C T T L
Sbjct:   92 ECQCFDGYEGKGCQRSTCPNACSGHGTCEYIEELAFGETWNDY------SKQYFIE-------DPKTFPYHGWDNRKIRTCVCDPTYGDVDCSKRLCPYGNDVLDIQDNSIIT-NYQIQQIRI---------------------KAINQLQGLRT----QTFALTFKSKLNETFTTYPIVFDDSDLNDFVHD----VQLALLKLPNRVIDGVSV--AAN-----------RDYATDYLNLNITFTGNNVQGKQNLLVVESYECSDGCTPKITGIDVQTLYNQ----------KHSNISEVLAADYYSFECGRRGKCDYNTGLCNCFTGYTGDNCNTMTTL 365          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: A0A8J2SH41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH41_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.980e-54
Identity = 153/460 (33.26%), Postives = 197/460 (42.83%), Query Frame = 1
Query:    4 CVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTF-EYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYS------ALSLNFTGQTFALTFTSAREERFTTIPINL----DGDGFTTMPYE------TAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKL--------------DGLPL------------------------STIDTQFDNLPYTIGAH------------------------------------------------------------------RSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            C CFEGY G+GC   +CPNDCSGHG C++A+D+ FG   G +  D  +     G LG      AV   +   WD GK RMC CDPGY  +DCS R CP+GNDVM ERL+ V ++KY +Q + L  +G    G  + +         ++  S      A   +  G++FALTFTS   + +TT PI +    D  G T           TAA ++ AL  LPN VID  +VD  Y  T  V  G       C+    V F G+ V G Q+LLEVE   C  GCTP+L              +G P                         + ID     LP T GA                                                                    S+V + ++ADY S+ CG RGKCDY++GEC CF GY G  C+TQTALI
Sbjct:  158 CECFEGYTGRGCGLQTCPNDCSGHGECVYAEDVTFGTVYGDYNVDAPS-----GGLGVG----AVKIPQKPNWDSGKVRMCVCDPGYTDIDCSRRMCPKGNDVMDERLDLVTALKYHRQYLVLIGAGALGDGVAYDDAGAECQTSQIKFQSTQPTSDACFADLVGRSFALTFTSQLNQSYTTRPIVIAKISDQTGSTDTEKRDAAQTATAAAVKDALRELPNYVIDDCEVDCWYEDTSGV--GAHYPSVKCE----VEFTGSSVAGPQYLLEVEADKCDSGCTPQLSNPVRLKSALRPSTEGNPTCPYPPYECGTAFWGKSGTYGIVGTAGIDDSATTLPVTDGADIGVDATGLDKYIMVGSEVMQLTAIAGTSLTVVRGHDGTTAAAHAGGDIVYLLSGTTKGSQGPHPDVLSHVAEEEAADYNSFECGRRGKCDYSSGECECFEGYMGDRCQTQTALI 602          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: K0R988_THAOC (EGF-like domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R988_THAOC)

HSP 1 Score: 200 bits (508), Expect = 3.670e-54
Identity = 130/340 (38.24%), Postives = 171/340 (50.29%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            +CVC+ GYEGKGC R SCP  CSGHG C +  DL FG+    +Y   + +TD L  LG        TF+ H +D  ++RMC CD G++G+ C  R CP GND+M      V     +   + +   G  Y+  +      T  D  L      + NF GQTFA+ FTS   E F T PI  D     T     A YIESAL  LPNGVID V V V  N   S +            ++ VTF G  VQG QH LE+    C  GC+P++ GL  + + T  D     +    S+VQ      + S+ CG RGKC+   GEC+CF G+ G  C + +AL+
Sbjct:   95 ECVCYAGYEGKGCGRQSCPGQCSGHGTCEYVKDLSFGIVHNEYY---DGSTDALSGLGIG----GRTFQDHSFDSDRSRMCVCDAGWDGLACQTRMCPYGNDIM-----DVIPGFDENSLLGMPGYGNEYAQVQ----TVTLFDANLD-----NSNFDGQTFAVKFTSKLNETFVTQPIAWD-----TTDAVLAGYIESALLKLPNGVIDDVAVTVDSNDNNSGV------------ILDVTFTGESVQGKQHKLEILADKCEVGCSPRITGL--ANLRTFSDT---ALSQTLSHVQISTPGSHNSFECGRRGKCNRKNGECSCFEGFTGSACGSLSALV 391          
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Match: Q9Y0F7_THAWE (Sexually induced protein 2 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F7_THAWE)

HSP 1 Score: 196 bits (498), Expect = 8.130e-53
Identity = 130/351 (37.04%), Postives = 163/351 (46.44%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALTFTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVDV--AYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLP---------LSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 1020
            +C CF GYEGK C R SCPNDCSGHG C +  DL FG+    +Y    N    LG  G T        EY  WD  + R C CD G++G+ C+ R CP GNDVM                I  +   +      + N         L      +LNF  ++FA+ FTS   E + T PI+ D     T       YIE+AL+ LPN VID V V V  + NA G VI               VTF G  VQG QH LE+    C +GCTP++ GL          LST++        TIG+H S+             CG RGKCDY +G C CF+G+ G  C   TAL+
Sbjct:   91 ECDCFPGYEGKSCGRQSCPNDCSGHGTCEYMKDLEFGIVYNEYYDGSTNALSGLGAGGKT-----FDHEYF-WDRDRARACICDAGWQGLSCNMRMCPYGNDVM--------------DVIPGFDENSLLGMPGYGNEVAQVQTVTLYDAELDNLNFNSKSFAIQFTSKLNETYVTQPISWD-----TTDSVLDGYIETALKKLPNKVIDDVDVSVDSSVNANGVVID--------------VTFTGAAVQGKQHKLEILQDACEEGCTPRITGLTNIRTFSDTTLSTVEIS------TIGSHNSFE------------CGRRGKCDYDSGLCKCFSGFTGDTCSILTALV 384          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13471.2598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8W7_9PHAE1.090e-24695.00EGF-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S3JQM4_9STRA1.200e-6940.43Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835ZF98_9STRA1.670e-6842.11EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S0L985_9EUKA2.010e-6740.99Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
F0YDW6_AURAN2.180e-6440.88EGF-like domain-containing protein n=3 Tax=Aureoco... [more]
A0A482RZM9_9ARCH2.490e-6239.71EGF-like domain-containing protein n=1 Tax=archaeo... [more]
C4B7Q7_OCHDN1.850e-5839.12Tubular mastigoneme protein n=1 Tax=Ochromonas dan... [more]
A0A8J2SH41_9STRA1.980e-5433.26Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K0R988_THAOC3.670e-5438.24EGF-like domain-containing protein n=1 Tax=Thalass... [more]
Q9Y0F7_THAWE8.130e-5337.04Sexually induced protein 2 n=1 Tax=Thalassiosira w... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13471contigE-fasciculatus_F_contig13471:172..3605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score570.9
Seed ortholog evalue3.9e-160
Seed eggNOG ortholog2880.D8LDD6
EggNOG free text desc.regulation of canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsKOG1225@1,KOG1225@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSecreted EGF-like domain protein OCM2
Ec32 orthologEc-25_001650.1
Exons3
Model size2024
Cds size978
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13471.2598.1prot_E-fasciculatus_F_contig13471.2598.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13471 217..2604 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927846.885225-UTR-E-fasciculatus_F_contig13471:171..2161622927846.885225-UTR-E-fasciculatus_F_contig13471:171..216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13471 172..216 +
1695995720.7887719-UTR-E-fasciculatus_F_contig13471:171..2161695995720.7887719-UTR-E-fasciculatus_F_contig13471:171..216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13471 172..216 +
1622927846.9398649-UTR-E-fasciculatus_F_contig13471:2604..36051622927846.9398649-UTR-E-fasciculatus_F_contig13471:2604..3605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13471 2605..3605 +
1695995720.825036-UTR-E-fasciculatus_F_contig13471:2604..36051695995720.825036-UTR-E-fasciculatus_F_contig13471:2604..3605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13471 2605..3605 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927846.8985074-CDS-E-fasciculatus_F_contig13471:216..5281622927846.8985074-CDS-E-fasciculatus_F_contig13471:216..528Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13471 217..528 +
1695995720.8008046-CDS-E-fasciculatus_F_contig13471:216..5281695995720.8008046-CDS-E-fasciculatus_F_contig13471:216..528Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13471 217..528 +
1622927846.908934-CDS-E-fasciculatus_F_contig13471:965..13491622927846.908934-CDS-E-fasciculatus_F_contig13471:965..1349Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13471 966..1349 +
1695995720.8086793-CDS-E-fasciculatus_F_contig13471:965..13491695995720.8086793-CDS-E-fasciculatus_F_contig13471:965..1349Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13471 966..1349 +
1622927846.9223104-CDS-E-fasciculatus_F_contig13471:2322..26041622927846.9223104-CDS-E-fasciculatus_F_contig13471:2322..2604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13471 2323..2604 +
1695995720.8169117-CDS-E-fasciculatus_F_contig13471:2322..26041695995720.8169117-CDS-E-fasciculatus_F_contig13471:2322..2604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13471 2323..2604 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13471.2598.1

>prot_E-fasciculatus_F_contig13471.2598.1 ID=prot_E-fasciculatus_F_contig13471.2598.1|Name=mRNA_E-fasciculatus_F_contig13471.2598.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=326bp
MSCPNDCSGHGRCMFADDLPFGVNLGSFYHDQNNNTDHLGELGDTNGNDA
VTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVK
YQKQAICLYSSGTAYSGTEFWNWDYTPNDPVLQRYSALSLNFTGQTFALT
FTSAREERFTTIPINLDGDGFTTMPYETAAYIESALEGLPNGVIDSVQVD
VAYNATGSVIAGEVIEDFPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDG
CTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKC
DYTTGECACFTGYYGLHCETQTALI*
back to top

mRNA from alignment at E-fasciculatus_F_contig13471:172..3605+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13471.2598.1 ID=mRNA_E-fasciculatus_F_contig13471.2598.1|Name=mRNA_E-fasciculatus_F_contig13471.2598.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3434bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13471:172..3605+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGTGCGTGTGCTTCGAGGGCTACGAAGGGAAGGGCTGCGCCCGCATGTC GTGCCCCAACGACTGCTCCGGCCACGGCCGATGCATGTTCGCGGACGACC TCCCGTTCGGCGTCAACCTGGGTTCCTTCTACCACGACCAGAACAACAAC ACGGACCACCTGGGCGAACTGGGCGACACCAACGGCAACGACGCCGTGAC CTTCGAGTACCACGGGTGGGACGAGGGTAAGACCCGCATGTGCCGCTGCG ACCCTGGCTACGAGGGGGTCGACTGCTCGTACCGCTCCTGCCCCCAGGGG AACGACGTCATGGTGGAGAGGCTCAACCGCGTCGCCTCCGTCAAGTACCA GAAGCAGGTGCGTGGGGGTGTGGGTGGGAGCAGGAGTTGTTTTTTTTCTT TCGACGCCTTTGCACGGCCGCCGCGACAGGAGGTCCGATGTTTAGAATAA AAAAAACATTTCACATATCTTTTTTCTTAGAACATGAGCTTTGGCACGCT CGTTTTCGCCCTGGCTGACAAGAGGAGACAAGAAAGACAGGTTCTGCCCC GCTCCTTGGTGTTGTTTATTTTGTTGCTTTCTCGGGTCTTGACTACTAAT AGACCAGCATGTGCTTATCCGAGATGGCTTCCTCGTATTTTCAACTAATG TCTCTGTCCGAGATCGGTTCCTTGGCTGTGGTTACGTCTCAACCGGGTAG TAGTCTTTATTATATATATATATATTTTCTAAAAACACATCATGACTTCT GCATCTCTCAACCCCCCTGGCCTACTCCGATCCATCCTCCGCAGGCCATC TGCCTGTACAGCTCGGGCACGGCCTACTCGGGGACCGAGTTCTGGAACTG GGACTACACGCCCAACGACCCGGTCCTGCAAAGGTATAGTGCTCTCTCGC TCAACTTCACGGGGCAGACCTTCGCACTCACCTTCACCTCCGCGAGGGAG GAGCGCTTCACGACCATCCCCATCAACCTCGACGGCGACGGCTTCACGAC CATGCCCTACGAGACCGCGGCCTACATCGAGAGCGCCCTTGAGGGCCTCC CCAACGGCGTCATCGACTCCGTCCAGGTAGATGTGGCCTACAACGCCACC GGGTCGGTGATCGCCGGGGAGGTGATCGAGGACTTCCCCTGCGACGAGCT CATCGTGGTCACGTTCGACGGCACACAGGTATGCATGTTTGAGGAATGTG CTTCTTTGTTTTGCTTATTTGTTCCGACGGTTTCAATGAACTGTGGTCTA CACTAATTTGTTGCTGTTTTTATTTGCTCATTTGTTTCTTACGAAATATA CTATCACAGAATACGTACCCCTTTTTGGAGATAGAACCAGAGGGAATGCG TTGAAGTCGTTGCAGGGAGTAATTATATATTTTTTTTCTTACGATGCCAC AACGAGTTCATGTCTGTCCAAAGGGAACGAGCCCGGGATAGACTAGCAAA TACACGCATAGTTGTTTCTTTGTTTATAAGCACTCTGTCGTCGTTGCATC GTGGTGTGCGTGCAAGGGAGGGCGGTCTCTAAAATGGAGCGTTTTTTGGT CTAGACGGCCGCATCATGTATGTATGACGTCGTCATACGAAGTAGTCGTT CTGTCTTGGTAGCTGTGATACACAATAACATGTCTTACGTGGATGCTTTC GTTACCCGGGAGTTGGTTGATACCTCTTAGTGTCGCTAGTTTTTCCGTCT CCACTACTTCATTTTTTTTTTTAAAGTTTATATTTTATATATTAAAGTGC ATTCTATTGTTGCTGAAAATCGCCACCGAACGCGGAACAACTTCTGTCAC GAGCTGATCATCGTGGTCACTTTCGATGGCCCCACCCGGGTAAGGCGAAC CTCGGTGGAGGTAGCGCCGCACAAAACCAACCCTTTCCGCCGCTGCTCAG TGACATTGAGGCAATATAACATGCTCATCTTTGTCGATTTTTCCCCCGAA GCATCATCGTGTACAGCAGCATTCGTTCCGACTGTCATAGGCTCAGTAGC TCACGCTCTAACGGTTTCTTGTTGAGATAGACGACCATTCCCCCTTCTCC TCTTGTGAGCCCCTCGACCCAAACCCGTGTCATGGACTCAACCCGTCATG GGCTGAAGGGTAAGCTACCGTTTGCATGACCCCCGCCCCCCGAAACGACA GGTCCAGGGAAACCAGCACCTGTTGGAGGTCGAGTGGCGGCCCTGTGGCG ACGGTTGCACCCCCAAGCTCGACGGCCTCCCGCTGTCCACCATCGACACC CAGTTCGACAACCTGCCCTACACCATAGGGGCGCACCGGTCGTATGTGCA GCAGATCCAGTCGGCGGACTACGAGTCCTACGTCTGCGGCGGCCGTGGGA AGTGCGACTACACGACGGGGGAGTGCGCGTGCTTCACGGGGTACTACGGC CTCCACTGCGAGACGCAGACCGCTCTCATCTGATCGTTGCACTCGTTGGG GGTCAATAGGCTCATCTGATCCTTGCGATTGTCGGCTTCGATAAATCTGC GGGGTAACATTTTTAGTTAGAACTATGTCAGTCTTTGGTTTCTTCTTAAG GGCGAGGACAGAACGAGTAGGCTTCCGCCCGTGAGATAACTCTTCCCGAT ATGCCGCAACGAAGCGATTGATGGGGGGTGCTTGGTCTGGTTTCAGTCTC AGATGACGGCCGGTCTTGCCACGCGTGTAGCCAGCCATGTATGGGTATCC TGCTGTCATTCATAGTCTAGTGTCTTGATCTCGCCGAATTACCATCGAAG TTGTTTCGGTCGATCCCCGTCGTCCGCTTTCTTGTCACCCACGGAGTTTT TTTTTTTGTAATTTCCGTAAATTAAGCTTTAGACTATGCGTGGACGTTCT ATTAGGCGTTCACATGCCAACCGCCCGCGTGTATGGCCATCATTATTTTC TTCCTCTTGATTCTTGTACTTGCTTTTGTCTCCTCTGCTTGAATTATTTT TTTTCCTCCTACGTTTTGTCGTGGGGATTCTCGGATTGTCTCGAGAAGTT GGTTCGACATTAAAAAGGAAATCGAGCACGGGCCTGTCTAGATTTTTACT ATGTACCGTACAAGACTGCGGAGCGGAGTTGATTCAGAAGGGTATTATTT ATGTACCCCGAGATACAATGCTCAAGAAACGCTCCGGCGCCGGTGCATGA CATCAATTCCGCGGAAGGAACCTAGCCTTGTGACGGCGGCTCTGTATTCT CTTTGGTCTTGTTGGATCTAGTCACGCTTGTAAACATCGATCGTAGCTCA ATGCGATGTCGGTGTGCTTGGTGAGAGGAAAGTAGACGGCTTGGGATTGG TGATGACGGCGGGCGGGTTTTATTTGGTCTGCTTAGAGACTGTTAGCGCA TATATATGCTACTCCGGGGACGTAGGCACACACCACACACACACATCGAA CACCCTTCGTGTAGCACGCGCGAGAAAGGGAGGG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13471:172..3605+

>mRNA_E-fasciculatus_F_contig13471.2598.1 ID=mRNA_E-fasciculatus_F_contig13471.2598.1|Name=mRNA_E-fasciculatus_F_contig13471.2598.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1956bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13471:172..3605+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCGTGCCCCAACGACTGCTCCGGCCACGGCCGATGCATGTTCGCGGA
CGACCTCCCGTTCGGCGTCAACCTGGGTTCCTTCTACCACGACCAGAACA
ACAACACGGACCACCTGGGCGAACTGGGCGACACCAACGGCAACGACGCC
GTGACCTTCGAGTACCACGGGTGGGACGAGGGTAAGACCCGCATGTGCCG
CTGCGACCCTGGCTACGAGGGGGTCGACTGCTCGTACCGCTCCTGCCCCC
AGGGGAACGACGTCATGGTGGAGAGGCTCAACCGCGTCGCCTCCGTCAAG
TACCAGAAGCAGATGTCGTGCCCCAACGACTGCTCCGGCCACGGCCGATG
CATGTTCGCGGACGACCTCCCGTTCGGCGTCAACCTGGGTTCCTTCTACC
ACGACCAGAACAACAACACGGACCACCTGGGCGAACTGGGCGACACCAAC
GGCAACGACGCCGTGACCTTCGAGTACCACGGGTGGGACGAGGGTAAGAC
CCGCATGTGCCGCTGCGACCCTGGCTACGAGGGGGTCGACTGCTCGTACC
GCTCCTGCCCCCAGGGGAACGACGTCATGGTGGAGAGGCTCAACCGCGTC
GCCTCCGTCAAGTACCAGAAGCAGGCCATCTGCCTGTACAGCTCGGGCAC
GGCCTACTCGGGGACCGAGTTCTGGAACTGGGACTACACGCCCAACGACC
CGGTCCTGCAAAGGTATAGTGCTCTCTCGCTCAACTTCACGGGGCAGACC
TTCGCACTCACCTTCACCTCCGCGAGGGAGGAGCGCTTCACGACCATCCC
CATCAACCTCGACGGCGACGGCTTCACGACCATGCCCTACGAGACCGCGG
CCTACATCGAGAGCGCCCTTGAGGGCCTCCCCAACGGCGTCATCGACTCC
GTCCAGGTAGATGTGGCCTACAACGCCACCGGGTCGGTGATCGCCGGGGA
GGTGATCGAGGACTTCCCCTGCGACGAGCTCATCGTGGTCACGTTCGACG
GCACACAGGCCATCTGCCTGTACAGCTCGGGCACGGCCTACTCGGGGACC
GAGTTCTGGAACTGGGACTACACGCCCAACGACCCGGTCCTGCAAAGGTA
TAGTGCTCTCTCGCTCAACTTCACGGGGCAGACCTTCGCACTCACCTTCA
CCTCCGCGAGGGAGGAGCGCTTCACGACCATCCCCATCAACCTCGACGGC
GACGGCTTCACGACCATGCCCTACGAGACCGCGGCCTACATCGAGAGCGC
CCTTGAGGGCCTCCCCAACGGCGTCATCGACTCCGTCCAGGTAGATGTGG
CCTACAACGCCACCGGGTCGGTGATCGCCGGGGAGGTGATCGAGGACTTC
CCCTGCGACGAGCTCATCGTGGTCACGTTCGACGGCACACAGGTCCAGGG
AAACCAGCACCTGTTGGAGGTCGAGTGGCGGCCCTGTGGCGACGGTTGCA
CCCCCAAGCTCGACGGCCTCCCGCTGTCCACCATCGACACCCAGTTCGAC
AACCTGCCCTACACCATAGGGGCGCACCGGTCGTATGTGCAGCAGATCCA
GTCGGCGGACTACGAGTCCTACGTCTGCGGCGGCCGTGGGAAGTGCGACT
ACACGACGGGGGAGTGCGCGTGCTTCACGGGGTACTACGGCCTCCACTGC
GAGACGCAGACCGCTCTCATCTGAGTCCAGGGAAACCAGCACCTGTTGGA
GGTCGAGTGGCGGCCCTGTGGCGACGGTTGCACCCCCAAGCTCGACGGCC
TCCCGCTGTCCACCATCGACACCCAGTTCGACAACCTGCCCTACACCATA
GGGGCGCACCGGTCGTATGTGCAGCAGATCCAGTCGGCGGACTACGAGTC
CTACGTCTGCGGCGGCCGTGGGAAGTGCGACTACACGACGGGGGAGTGCG
CGTGCTTCACGGGGTACTACGGCCTCCACTGCGAGACGCAGACCGCTCTC
ATCTGA
back to top