mRNA_E-fasciculatus_F_contig1347.2596.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: A0A6H5KEA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA4_9PHAE) HSP 1 Score: 285 bits (728), Expect = 6.690e-83 Identity = 165/244 (67.62%), Postives = 184/244 (75.41%), Query Frame = 3
Query: 978 AGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVK-----------------------IADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDHRHWRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGESGVRATKPSGAPEKSLVESPAVSAPSHDGRLGREAELAALKAKLEAMELADERRQ 1640
AGEAM+LLS AVPVVGGLASFAAAALKA DH +QTRRVVK I DLAADAVE CSLARRL LR+T+GLAAGTISTT+N+ R W + + PDG +EE VMEWFT+ VA+H+AN+T SRGTPAEQAGRRLGK+HLK LL AVG+G L GTNT EEK EKLL+VI G SG R TKP A +KSLVE PAV APSHDG L R+AE AALKAKLEA+ELADERRQ
Sbjct: 143 AGEAMQLLSHAVPVVGGLASFAAAALKARDHRMQTRRVVKHLQPSTYVHSRPTGLNQLFDDWQITDLAADAVERCSLARRLALRMTEGLAAGTISTTDNSVGGRGWNLDLGALPDGTSEEAVMEWFTEEVANHEANTTASRGTPAEQAGRRLGKQHLKKLLMAVGQGRLLGTNTTEEKVEKLLEVIAGGSGSRVTKPPRAEDKSLVEYPAVPAPSHDGDLDRDAEFAALKAKLEALELADERRQ 386
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: D7G8A7_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI) HSP 1 Score: 185 bits (470), Expect = 3.130e-45 Identity = 123/299 (41.14%), Postives = 160/299 (53.51%), Query Frame = 3
Query: 1032 ASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARD---HR-------------HWRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGESGVRATKPSGAPEKSLVESPAVSAPSHDGRLGREAELAALKAKLEAMELADERRQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSDNKTLLGEVGTMKKLIPKPRGGESSCVDAG 1880
A FAA ALKAGD++IQTRRV+K+ DLA DAVECCS+A+ L LRLTD L+ TI+T+ + R H W +S PD A++ED MEWF + A N+T + TP E+ GRRLGKRH++ +LAAV RGCL+GT+ EEK E+LL+V+V E+G + S A E+S + PA APSHDG L AE AA++AKLEA+E+ +N L +V TM+K IPKP+G S VD G
Sbjct: 386 AGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSVAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQSNGGLPDCASDEDFMEWFAEEAASCVPNNT-GKSTPEEKTGRRLGKRHIRMILAAVERGCLQGTHAIEEKVEQLLKVVVPEAGAKPVSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEI--------------------------------------------------------ENGKLTRKVSTMEKSIPKPQGEPSDEVDVG 627
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: A0A6H5JUH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH6_9PHAE) HSP 1 Score: 174 bits (442), Expect = 7.090e-44 Identity = 114/234 (48.72%), Postives = 138/234 (58.97%), Query Frame = 3
Query: 1092 VKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDHRHWRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAEQAGRR-LG-----------------KRHLKTLLAAVGRGCLEGTNTAEEKA----------EKLLQVIVGESGVRATKPSGA-----------------------PEKSLVESPAVSAPSHDGRLGREAELAALKAKLEAMELADERRQ 1640
V I DLAAD VECCSLARRL L +TDGLAAGT STTEN+ R W + + PDG +EE +MEWFT+ VA+H+AN+T SRGTPAEQ GR+ +G ++HLK LL AVG+ L+GTNT EE L ++ + S ++ SG P+KSLVE PAV APSHDG L R+AE A LKAKLEA+ELADERRQ
Sbjct: 101 VAITDLAADVVECCSLARRLALPMTDGLAAGTTSTTENSVGGRGWNLGIGTMPDGTSEEALMEWFTEEVANHEANTTASRGTPAEQVGRKEIGASAFRGTQSCTSWEAAREQHLKKLLMAVGQDRLQGTNTTEEAFWPRDPGSDFDPGLQRLCLLPSETAPSRLSGRATQVQTLIQACNDCVSYPRRLHPPDKSLVEYPAVPAPSHDGGLDRDAEFATLKAKLEALELADERRQ 334
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 167 bits (424), Expect = 9.060e-39 Identity = 91/182 (50.00%), Postives = 123/182 (67.58%), Query Frame = 3
Query: 978 AGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDHRH--------------WRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAE-QAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGES 1478
AG+ ++ LS+AVPVV GLA AAAALKAGD ++QTRRV KI D+A D+ +CC LAR L L+L+DG GT+ TT+ A + W + + + PD A EE VM+WF + VAD++ N+ ++R T A QAGR+LGKRHL+TLL AVGR CL GTNT +EK + L+ +I+ E+
Sbjct: 532 AGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEA 713
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.850e-38 Identity = 92/182 (50.55%), Postives = 124/182 (68.13%), Query Frame = 3
Query: 978 AGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDH-RH-------------WRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGT-PAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGES 1478
AG+ ++ LS+AVPVV GLA AAAALKAGD ++QTRRV KI D+A D+ +CC LAR L L+L+DG GT+ TT+ A + H W + + + PD A EE VM+WF + VAD++ N+ ++R T PA QAGR+LG RHL+TLL AVGR CL GTNT +EK + L+ +I+ E+
Sbjct: 744 AGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEA 925
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 162 bits (409), Expect = 6.340e-37 Identity = 90/182 (49.45%), Postives = 121/182 (66.48%), Query Frame = 3
Query: 978 AGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDH-RH-------------WRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAE-QAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGES 1478
AG+ ++ LS+AVPVV GLA AAAALKAGD ++QTRRV KI D+A D+ +CC LAR L L+L+DG GT+ T + A + H W + + + PD A EE VM+WF + VAD++ N ++R T A QAGR+LG RHL+TLL AVGR CL GTNT +EK + L+ +I+ E+
Sbjct: 559 AGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEA 740
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 158 bits (400), Expect = 5.060e-36 Identity = 99/227 (43.61%), Postives = 136/227 (59.91%), Query Frame = 3
Query: 975 QAGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDHR-----HWRKSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGESGVRATKPSGAPEKSLVESPAVSAPSHDGRLGREAELAALKAKLEAMELADERRQ 1640
+AG AMKL+S+AVPVVGGL A AL+AGDH++QTRR+VKI +A+DAV+CC LARRL L+LTDGL +T +NA + R P +EEDV E+ + VA + N + G RLGK+HL+ LL A+ RG L+G+N E+K E L+ I+ E+ P++ +V SP V P+HDG L AE A++A LEA++ E +Q
Sbjct: 531 KAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGGADMTPGDMSEEDVFEYLLEEVASYKRN---------DHGGVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRETQQ 748
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.930e-35 Identity = 95/192 (49.48%), Postives = 113/192 (58.85%), Query Frame = 3
Query: 978 AGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDHRH-----WRKSVPSFPDGANEEDVMEWFTDGVADHDANSTES-RGTPAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGESGVRATKPSGAPEKSLVESP 1535
AG+A+ LLSAAVP+VGGL AA ALK GD +IQTRRV KIAD+A DAVECCSLARRL WR+ + PDGA E+DVMEWF D V++ + + R TP EQAG RLGK+HL+TLL AVG GCLEG N EEK E L++ + E A AP L + P
Sbjct: 872 AGKALALLSAAVPMVGGLGGIAAGALKTGDRYIQTRRVAKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWRQGEYALPDGAGEKDVMEWFADEVSNFEPQHRHATRMTPEEQAGSRLGKKHLQTLLLAVGTGCLEGANNIEEKVELLVRTVFPEDEGNAVSTPRAPNVLLEQVP 1063
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.500e-35 Identity = 97/232 (41.81%), Postives = 142/232 (61.21%), Query Frame = 3
Query: 981 GEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARD-HRHWR----------KSVPSFPDGANEEDVMEWFTDGVADHDANSTESRGTPAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGESGVRATKPSGAPEKSLVESPAVSAPSHDGRLGREAELAALKAKLEAMELADERRQA 1643
G A+ LLS+AVPV+ GLA A AL+ GDH +QTRR+VKI +AAD +ECCSLARRL L+LTDGL T + A + H + PD E+DV E+ + VA ++ ++ G+RLGK+HL+ LL A+ RGCL+G++ ++K E LL I+ + +R ++ S P+K +V SP AP+HDGRL A++AAL+A +E + LA ++++A
Sbjct: 560 GTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYER---------SDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSMADIAALQAAVEVLTLAKDKQRA 782
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI) HSP 1 Score: 156 bits (395), Expect = 4.300e-35 Identity = 97/196 (49.49%), Postives = 117/196 (59.69%), Query Frame = 3
Query: 978 AGEAMKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLARRLPLRLTDGLAAGTISTTENARDHRH-----WRKSVPSFPDGANEEDVMEWFTDGVA-----DHDANSTESRGTPAEQAGRRLGKRHLKTLLAAVGRGCLEGTNTAEEKAEKLLQVIVGESGVRATKPSGAPEKSLVESP 1535
AG+A+KLLSAAVP+VGGL A+AALK GD +IQTRRVVKIAD+A DAVECCSLARRL W + + PDGA + DVMEWF D VA DH A +R TP EQAGRRLGK+HL+TLL AVG G LEG + EEK E L++ ++ E A AP+ + + P
Sbjct: 845 AGKALKLLSAAVPMVGGLGGIASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXGGGGWSQGEYALPDGARDRDVMEWFADEVANLEPQDHHA----TRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVSTPQAPDVVVEQVP 1036 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1347.2596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1347.2596.1 >prot_E-fasciculatus_F_contig1347.2596.1 ID=prot_E-fasciculatus_F_contig1347.2596.1|Name=mRNA_E-fasciculatus_F_contig1347.2596.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=392bp MKLLSAAVPVVGGLASFAAAALKAGDHHIQTRRVVKIADLAADAVECCSLback to top mRNA from alignment at E-fasciculatus_F_contig1347:434..12085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1347.2596.1 ID=mRNA_E-fasciculatus_F_contig1347.2596.1|Name=mRNA_E-fasciculatus_F_contig1347.2596.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=11652bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1347:434..12085+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1347:434..12085+ >mRNA_E-fasciculatus_F_contig1347.2596.1 ID=mRNA_E-fasciculatus_F_contig1347.2596.1|Name=mRNA_E-fasciculatus_F_contig1347.2596.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2352bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1347:434..12085+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |