mRNA_E-fasciculatus_F_contig1342.2564.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: D8LBK5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK5_ECTSI) HSP 1 Score: 314 bits (805), Expect = 1.390e-107 Identity = 157/166 (94.58%), Postives = 157/166 (94.58%), Query Frame = 1
Query: 1 LSMST--IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLRSGGIAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSNDVLAARNRCCGLVLQAMGFVENG 492
LSMST IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVS L SGG AVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVL MMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQM AMD L ADSNDVLAARNRCCGLVLQAMGFVENG
Sbjct: 44 LSMSTPTIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSSLLSGGTAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLTMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMAAMDGLIADSNDVLAARNRCCGLVLQAMGFVENG 209
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A1E7FCR0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCR0_9STRA) HSP 1 Score: 198 bits (504), Expect = 2.770e-62 Identity = 105/167 (62.87%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 13 TIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCL---RSGGIAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVL--TADSNDV-LAARNRCC-GLVLQAMGFVENG 492
TIYGVPNSGW SP WNWGSASGTGHDCA ICR+TY TKE R L++ L A+DFEEVKL MALAWQNGRWDGSDGG GGYGDVL MMA AKRYEE E+ + L DM+ RF LL P E M L +D+ND+ + RCC GLVL+AMGF++NG
Sbjct: 8 TIYGVPNSGWTSPSWNWGSASGTGHDCAKICRQTYSTKEVRLNLINSLILSDETAKAIDFEEVKLVMALAWQNGRWDGSDGGVGGYGDVLSMMANAKRYEENVEDGKTL-LFRDMQERFHLLDPNNEDEIMMKQLLDNSDNNDIDIDTTLRCCSGLVLKAMGFIQNG 173
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A448Z4V7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4V7_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.760e-61 Identity = 99/159 (62.26%), Postives = 115/159 (72.33%), Query Frame = 1
Query: 16 IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLRSGGIAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSNDVLAARNRCCGLVLQAMGFVENG 492
IYGVPNSGW SP+WNWG ASGTGHDCAAICRR Y T+ R L+ L S A D EEVKL MALAWQ+GRWDGSDGG GGYGDVL MA A RYE+ E+ L+ DM+ RF LL+PT + AM+ LT + +DV +A C GLVL+AMGFVE+G
Sbjct: 42 IYGVPNSGWTSPEWNWGYASGTGHDCAAICRRKYSTRGERSALIDELVSASPATDLEEVKLVMALAWQSGRWDGSDGGPGGYGDVLAAMADAXRYED--EKTGNLSLLRDMKERFGLLNPTNDDRIAMENLTDNGDDVDSALRTCSGLVLKAMGFVESG 198
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A7S0BXZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXZ8_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.650e-59 Identity = 96/175 (54.86%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 LSMSTIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLRSGGIAVD--FEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEE----ERARKLVEDMRPRFALLSPTKEQMDAMDVLTA-----DSNDVLAARNRCCGLVLQAMGFVENG 492
L M+ +YG+PNSGWKSPQWNWGSA GTGHDCA ICR+ + T+E+R EL+ L SG D FEEVKL + LAWQNGRWDGSDGG GGYG+VL MA A RYEEG + R V D++ R+ L++ KE ++ M + + D N + AR +CCGLVL+AMGF+E G
Sbjct: 45 LQMTDLYGIPNSGWKSPQWNWGSAMGTGHDCAMICRQKFSTRESRTELIDQLCSGSSPYDAPFEEVKLVLGLAWQNGRWDGSDGGRGGYGEVLNRMADADRYEEGGSGGSFLDANRNFVLDLQERYPLIANQKEDLEDMKSVASLLDAEDVNQMDVARRKCCGLVLKAMGFIEKG 219
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: B7FUQ5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUQ5_PHATC) HSP 1 Score: 191 bits (485), Expect = 2.350e-59 Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 4 SMSTIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCL-----RSGGIAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSN-DVLAARNRCCGLVLQAMGFVENG 492
++ TIYG+P SGW SPQW WG GTGHDCAAICRR Y ++ R ELV L S + +FEEVKL +AL WQNGRW+G DGG+GGYG+VL MA A+RYE G ++E + LV DM RF LL+P+ EQ MD L D++ D AR RC GLVLQAMGFVE G
Sbjct: 7 NVKTIYGIPGSGWTSPQWQWGYGVGTGHDCAAICRRLYEKRQFRVELVEQLIESSNPSNRVPANFEEVKLVLALVWQNGRWNGKDGGEGGYGEVLQEMASARRYENGPDDECSGLLVRDMARRFPLLNPSGEQQKLMDQLLKDADSDYDFARRRCSGLVLQAMGFVEQG 175
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A7S4ALM8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALM8_9STRA) HSP 1 Score: 183 bits (465), Expect = 6.390e-56 Identity = 98/167 (58.68%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 4 SMSTIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELV-----SCLRSGGIAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSNDVLAARNRCCGLVLQAMGFVEN 489
S TIYGVPNSGW SP WN G SGTGHDCAAICR Y T+EAR L+ S S ++D EEVKL MAL WQNGRWDGSDGG GGYGDVL MA AKRYE+ S E A L+ DM+ RF LL+PT + AM+ L A+ DV +A C GLVL+A GF
Sbjct: 41 SSKTIYGVPNSGWTSPNWNXGYGSGTGHDCAAICRGKYSTREARSALIDRLISSTTTSTTTSIDLEEVKLVMALKWQNGRWDGSDGGPGGYGDVLATMANAKRYEDDSTGELA--LLRDMKERFGLLNPTDDDRTAMENL-AEGGDVRSALLSCSGLVLKATGFANG 204
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A7S4J9U7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9U7_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.250e-50 Identity = 96/175 (54.86%), Postives = 114/175 (65.14%), Query Frame = 1
Query: 16 IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCL-----RSGGIAVD--------FEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKE---QMDAMDVLTADSNDVLAARNRCCGLVLQAMGFVENG 492
IY VP SGW SP WNWG ASGTGHDCA ICRR + ++R LV L +GG+ VD FEEVKL + LAWQ GRWDGSDGG GGYG+VL MA +K YE + ++R VEDMR R+ LL KE +MD++DV D D+ AR RC GLVL+AMGFV+NG
Sbjct: 67 IYAVPGSGWASPDWNWGYASGTGHDCAMICRRRWSAADSRAALVEALLHPPPANGGL-VDADAARDPPFEEVKLVLGLAWQCGRWDGSDGGRGGYGEVLAKMA-SKAYEPSDDPAKSRSFVEDMRRRYRLLGGGKEDAAEMDSLDV-GDDGADLDEARRRCAGLVLRAMGFVQNG 238
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A7S3V6U6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6U6_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.670e-48 Identity = 87/176 (49.43%), Postives = 108/176 (61.36%), Query Frame = 1
Query: 16 IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLRSGGIAVD----------------FEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSN-DVLAARNRCCGLVLQAMGFVENG 492
IY +P SGW SP+WNWGSA GTGHD A ICRR +G+ +AR+ LV L + D FEEVKL + LAWQ GR DGSDGG GGY D+L MA AKRYE E+ A + VEDM RF L++ + E DAM + +D D+ AAR +C G+VL MGF++ G
Sbjct: 40 IYDIPGSGWASPKWNWGSALGTGHDAALICRRQWGSTDARKALVEALLNPNHVSDETLSSIELADENRQPPFEEVKLVLGLAWQKGRRDGSDGGRGGYEDILSSMAAAKRYESDDEKINAERFVEDMVQRFDLITSSSEAKDAMRQIESDCGADIDAARRKCSGMVLTEMGFIKKG 215
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A6U5HKK7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5HKK7_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.820e-48 Identity = 83/168 (49.40%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 16 IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLRSGGI---------AVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSNDVLAARNRCCGLVLQAMGFVENG 492
IYG+P SGW SP WNWG GTGHDCAAICRR YG+K +R EL+ L G + ++FEEVKL + LAWQNGRW G DGG+GGY +VL MA A+RYE G + E V+DM R+ LL P M +V ++ +C GLVL++MGF+E+G
Sbjct: 53 IYGIPGSGWSSPSWNWGYGVGTGHDCAAICRRKYGSKSSRGELLRQLLLGVVDDSSNNSDDVLNFEEVKLILGLAWQNGRWSGKDGGEGGYSEVLQRMADAQRYEVGPDCEAL--FVKDMAERYHLLKPDVADAQEMKGCCEADQNVQVSKLKCAGLVLKSMGFLEDG 218
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Match: A0A1E7FX35_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX35_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.300e-48 Identity = 89/160 (55.62%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 13 TIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLRSGG-IAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLMMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMDAMDVLTADSNDVLAARNRCCGLVLQAMGFVEN 489
TIYGVPNSGW SPQWNWG SGTGHDCAAICR Y + E R +L+ L G D EEVKL MAL WQ R GGYGDVL MMA AKRYEE + L++DM RF LL+PT+E AM+ L ++NDV +A C GLVL+AMGF
Sbjct: 36 TIYGVPNSGWTSPQWNWGYGSGTGHDCAAICRNKYASNEERSKLIKDLLEGDPTTTDLEEVKLVMALEWQGDR-------RGGYGDVLNMMANAKRYEEEGDPSPNSLLLKDMMERFHLLNPTEENRAAMEALN-ETNDVDSAVRSCSGLVLKAMGFART 187 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1342.2564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1342.2564.1 >prot_E-fasciculatus_F_contig1342.2564.1 ID=prot_E-fasciculatus_F_contig1342.2564.1|Name=mRNA_E-fasciculatus_F_contig1342.2564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp MSTIYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSCLback to top mRNA from alignment at E-fasciculatus_F_contig1342:5300..5794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1342.2564.1 ID=mRNA_E-fasciculatus_F_contig1342.2564.1|Name=mRNA_E-fasciculatus_F_contig1342.2564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=495bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1342:5300..5794+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1342:5300..5794+ >mRNA_E-fasciculatus_F_contig1342.2564.1 ID=mRNA_E-fasciculatus_F_contig1342.2564.1|Name=mRNA_E-fasciculatus_F_contig1342.2564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1342:5300..5794+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |