mRNA_E-fasciculatus_F_contig1342.2563.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A6H5KGX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGX1_9PHAE) HSP 1 Score: 421 bits (1081), Expect = 1.270e-147 Identity = 211/234 (90.17%), Postives = 217/234 (92.74%), Query Frame = 1
Query: 1 MSARKVGLVACMASLLCSRSCAWTA--VPKGNVRQAHRPNHISSASRCG-----TSSVLTRQATSEDGEEAAVPAKREPWWEDERRTQGVPTLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVER 681
MS+RKVGLVACMASLLCSRSCAWTA V KGN RQAH P+HI+ + TSSVLTRQATS DG+EAAVPAKREPWWEDERRTQGVPTLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFK+PLYPFLLLQVNNLEIPLKGG KIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVER
Sbjct: 8 MSSRKVGLVACMASLLCSRSCAWTAAVVAKGNARQAHGPHHITRSPAVKHRSRRTSSVLTRQATSVDGDEAAVPAKREPWWEDERRTQGVPTLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKEPLYPFLLLQVNNLEIPLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVER 241
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A836CDS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS7_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.340e-37 Identity = 76/148 (51.35%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 253 TLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGK-ARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGK------IAPGRLYVKVDHRRDDELGPTLKSGTVGVKIV 675
TL ST WR+FLS++DP G E G TT++AV VRF EE FEPPQG +EV+E+N Y G ARWTLSE D R LW+WGLF+ +PFLL Q+ EIPL G G I G+LY KV H+ + E G L++G VGVK
Sbjct: 95 TLDRSTPWRLFLSVRDPE-GPENGATTDIAVVVRFVEEPGFEPPQGRVEVLEENRYVRADQGPFARWTLSEDPDDRKDSLWIWGLFRQLPFPFLLFQLEIDEIPLGGTGADGVARVIPAGKLYAKVPHKFEKETGSQLRAGDVGVKYT 241
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S4SSA2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SSA2_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.240e-28 Identity = 65/158 (41.14%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 226 DERRTQGVPTLSGSTQWRMFLSLKD-PTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAG----KARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGK--IAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVE 678
++ R TL+ T W++ + L PT GG D +V F EE +EPPQG ++ I + + G K+RW LSE + R GLWVWGLFK+PLYPF+LLQ+ + EI L G K I P +LY +++H RD+ELG LK+ + V+ +E
Sbjct: 35 EKMRLSAKSTLTDETAWKLRILLNGVPTTGGRKVDQI-FSVNAHFIEEEGYEPPQGFIKQIVSDESEENKGGLKITKSRWILSEDPNERKDGLWVWGLFKEPLYPFMLLQLESEEIELPGEEKDTIQPLKLYAQINHSRDEELGVVLKTTILNVRELE 191
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S0LLZ2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLZ2_9EUKA) HSP 1 Score: 115 bits (289), Expect = 4.300e-28 Identity = 67/168 (39.88%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 238 TQGVP--TLSGSTQWRMFLSLKDPTLGGEAGDTTEVA-----------------VRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGK--ARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVE 678
T G P +LS S WR+ L L P G+A TTE A +RF E +EPPQG + V P Q G+ +RWTLSE D R LW+WGLFK+PLYPF+L QV L I G +I PG LY++ +HRR G L G V ++ +
Sbjct: 46 TDGAPVRSLSPSCTWRLSLRLTAPKQEGDAAGTTEAAPADESIGGDDGNSVVLTASLRFAVESGYEPPQGLIRVESSLPEDALQLGEVDSRWTLSEDPDDRKDSLWIWGLFKEPLYPFILFQVPCLGIDFPNGKRIPPGLLYIQAEHRRHPTEGLRLGDGIVTYRVAQ 213
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: C1EGI5_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGI5_MICCC) HSP 1 Score: 114 bits (285), Expect = 1.120e-27 Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 244 GVPTLSGSTQWRMFLSLKDPTLGGEAGDTTE---VAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQV--NNLEIPLKGGGKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVE 678
G P++ + WR+ L L G +A TT + VR RF + +EPPQGS+E+ +D QAG RWTL+E + R AGLW+WGLF++PLYP++LL N +E+ +GG I G+L+ +V H R + G L G + K+ +
Sbjct: 49 GTPSIDSKSLWRLRLELFS---GKDADATTPDRTITVRARFVVDEGYEPPQGSIEIEDDQELAFVQAGFHRWTLAEDPNERKAGLWIWGLFEEPLYPYMLLSFDCNRIEVA-EGGYHIPKGKLFAEVKHARGSKSGHVLSDGKLSFKVTK 194
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S0I175_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I175_9EUKA) HSP 1 Score: 113 bits (283), Expect = 2.160e-27 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 1
Query: 223 EDERRTQGVPTLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAG--KARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLE-IPLKGGGKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVE 678
E R L+ +T WR+ L+L P G++ E+ V +RF +E+ FEPPQG + V P T + G K RWTLSE D + LW+WGLF PLYPFLLL V E + L GG I G+L+++ +HRRD + L +GTV K+ E
Sbjct: 42 EKRREELASGALNPATFWRLALNLHPPNKPD--GESVELIVTLRFMQEQGFEPPQGLMLVESCLPEGTVELGEQKDRWTLSEDPDDQKDSLWIWGLFSQPLYPFLLLAVTLTEPVELPGGETIPAGKLFLQGEHRRDPDADTLLGAGTVVFKVSE 194
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S4C309_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C309_CHRCT) HSP 1 Score: 112 bits (281), Expect = 9.370e-27 Identity = 63/155 (40.65%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 244 GVPTLSGSTQWRMFLSLKDPTLGGEAG-------DTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGK--ARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVER 681
GV +LS + +WR+ L L PT G A D V VRF + +EPPQG + V P + G+ RW LSE D R LW+WGLFK+PLYPF+L Q+ EI L G I GRLY++ DHRR G L G V ++ ++
Sbjct: 76 GVRSLSPACEWRLQLRLFPPTKEGAADSEAPRAEDYEVVTATVRFALDEGYEPPQGLIRVESCLPEGALKLGEMPTRWMLSEDPDDRKDSLWIWGLFKEPLYPFILFQLECSEIALPTGVAIPAGRLYIQADHRRSPTEGVRLGDGKVSYRVAQQ 230
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S2G6H0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6H0_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.650e-26 Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = 1
Query: 247 VPTLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSL--EVIED----NPYFTQQA-GKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKG--GGKIAPGRLYVKVDHRRDDELGPT-LKSGTVGVKIVER 681
V TL+ +T W++ L+LK TL G + +++ RV+FDE D+EPPQG + E+ ED + YF GK RW LSE D R GLW+WGLFK+PLYPF++L+++ IP+ G G +I P ++ H R+ + G LK G V ++ +ER
Sbjct: 57 VATLTRATTWQVSLNLKTTTLAGNKVER-DLSFRVKFDEMVDYEPPQGVVIPEIDEDLEDASIYFDSDGKGKNRWLLSEDPDDRKDGLWIWGLFKEPLYPFMILRLSFNAIPVAGTDGDEIPPFTCSAQLPHSRNLKTGEVMLKPGPVTIERMER 210
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S0NTZ1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTZ1_9EUKA) HSP 1 Score: 108 bits (270), Expect = 4.240e-26 Identity = 57/133 (42.86%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 286 LSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGKA--RWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVE 678
L + L G+ G V VRF EE +EPPQG + V P Q G+ RW LSE + R LW+WGLFK+PLYPF+L QV L + L GG+I PG LYV+ +HRR G L G V ++ +
Sbjct: 7 LPAAEAALDGDDGGVV-VTAAVRFAEEAGYEPPQGRIRVESSLPEGALQLGEVSTRWMLSEDPEDRKDSLWIWGLFKEPLYPFILFQVPCLGLELPNGGRIPPGLLYVQAEHRRHPTEGVRLGDGKVSYRVAQ 138
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Match: A0A7S0T816_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0T816_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.030e-24 Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 1
Query: 229 ERRTQGVPTLSGSTQWRMFLSLKD-PTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVI-----------------EDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLEIPLKGGGK--IAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVER 681
E T + TL+ +T W M ++L++ PT G+ V V+ RF EE +EPPQG LE + P T +G RWTLSE D R GLW+WGLFK+PLYPFLLLQ + ++PL G K I P RL+ +++H+R+D G + S + I E+
Sbjct: 46 ESSTTSMATLTDATTWTMRMNLENLPTENGKKTGGIYV-VQARFIEEEGYEPPQGLLEQVFPQDATSDGDENEEEKTSSTPQMTVTSG--RWTLSEDPDDRKDGLWIWGLFKEPLYPFLLLQFDVEKMPLPGEEKDAIKPFRLFAQINHKREDN-GEVVLSSVSDLTIREK 212 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1342.2563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1342.2563.1 >prot_E-fasciculatus_F_contig1342.2563.1 ID=prot_E-fasciculatus_F_contig1342.2563.1|Name=mRNA_E-fasciculatus_F_contig1342.2563.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=228bp MSARKVGLVACMASLLCSRSCAWTAVPKGNVRQAHRPNHISSASRCGTSSback to top mRNA from alignment at E-fasciculatus_F_contig1342:1155..4049- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1342.2563.1 ID=mRNA_E-fasciculatus_F_contig1342.2563.1|Name=mRNA_E-fasciculatus_F_contig1342.2563.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2895bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1342:1155..4049- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1342:1155..4049- >mRNA_E-fasciculatus_F_contig1342.2563.1 ID=mRNA_E-fasciculatus_F_contig1342.2563.1|Name=mRNA_E-fasciculatus_F_contig1342.2563.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1368bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1342:1155..4049- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |