mRNA_E-fasciculatus_F_contig13418.2562.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: D8LK59_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK59_ECTSI) HSP 1 Score: 318 bits (816), Expect = 8.270e-108 Identity = 151/162 (93.21%), Postives = 161/162 (99.38%), Query Frame = 1
Query: 1 QNGDILQPLTRTGKDTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEMSSGPVNDRTTLLPDQAKMG 486
++GDILQPLTRTGKDTETPVEWVACEPGGI+R+MLLDQSSPILMYDDVVLFEDFIHDHGVVR+SVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFG+LSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVL++SSGP+ND TTLLPDQAK+G
Sbjct: 148 ESGDILQPLTRTGKDTETPVEWVACEPGGINRQMLLDQSSPILMYDDVVLFEDFIHDHGVVRLSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGELSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLDLSSGPLNDCTTLLPDQAKIG 309
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A836CMW7_9STRA (TIP41-like family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW7_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.230e-34 Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 52 TPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEMSS 435
T ++W C+ GID ML D ++PIL +D+V LFEDFIHD G VR+S K RVMP W+VLLRYWLRVDG+ +K+ D R FHKFG V RE + + F +E+R S + + A+ A P+L+ ++
Sbjct: 163 TTLDWQRCDASGIDVAMLQDSAAPILFFDEVTLFEDFIHDAGEVRLSAKVRVMPRCWYVLLRYWLRVDGITLKIADARYFHKFGAADVHREVSVLQLPFEDVERRLPSATQACHLTADQAYPILKQAA 290
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A7S2H1X7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1X7_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.210e-33 Identity = 67/150 (44.67%), Postives = 95/150 (63.33%), Query Frame = 1
Query: 4 NGDILQPLTRTGKDTETPVEWVAC------EPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAE---SALPVLE 426
+GD+ T G++T P WV E GGIDR +LLD + PIL +DDV+LFED +HD G +R+S + RVMP WFV++R W+R+DGV ++ +TR FHKFGD V RER V + +LE GL+ +P+ + + + LP+LE
Sbjct: 140 SGDLTHTSTLAGENT-APAAWVDADGAEGEETGGIDRALLLDHTLPILFFDDVLLFEDELHDQGDMRISARIRVMPAAWFVVVRCWVRLDGVGLRAVETRLFHKFGDAHVSRERYAREVVWENLESVGLNGEPATLSDPDLVVAKLPLLE 288
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: W7TH58_9STRA (TIP41-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH58_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.390e-31 Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 40 KDTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEMSSGPVND 450
K+ +EW + IDR +L + PIL YDDV L+ED +HDHGVV ++VK RVMP WFVLLRY+LRVDGV++++ DTR FH+ G + +E + V+F L + GLST S Y + + + +++ S GP D
Sbjct: 258 KERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMID-SIGPPAD 393
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A7S2SEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEG8_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.010e-30 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 55 PVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEMSSGP 441
P W C GI R M+ D+S+PIL++DD+VL+ED +HD G + +SVK RVMP WF+LLR + RVD VV++V +TR FH+ GD V RE +VS+ L +G S DP Y +P L +S+ P
Sbjct: 96 PAAWEECASSGIQREMVADRSAPILLFDDLVLYEDELHDFGDMSVSVKFRVMPQCWFLLLRCFCRVDNVVIRVHETRMFHRVGDEYVHREDQHRTVSWEDLASQGRSVDPKDYKEVNRVVPTLPLSAPP 224
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A4D9D382_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D382_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.330e-30 Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 40 KDTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEMSSGPVND 450
K+ +EW + IDR +L + PIL YDDV L+ED +HDHGVV ++VK RVMP WFVLLRY+LRVDGV++++ DTR FH+ G + +E + V+F L + GLST S Y + + + +++ S GP D
Sbjct: 190 KERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMID-SIGPPAD 325
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A0G4IT37_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IT37_PLABS) HSP 1 Score: 114 bits (285), Expect = 2.960e-28 Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 64 WVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEM 429
WV ID +ML + PI YDDVVLFED +HDHGV +SV+ RVMP + VL+R+WLR+DGV+M+V DTR FH G + RE +F L+ RG + + YPNA++ALP L +
Sbjct: 117 WVDNPGFAIDTQMLT-RPDPIQWYDDVVLFEDELHDHGVSVLSVRVRVMPQCFLVLMRHWLRIDGVMMRVQDTRVFHDIGKPVICREVKLSEATFHDLQSRGHAGHAAQYPNADAALPYLAL 237
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A4RZU0_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZU0_OSTLU) HSP 1 Score: 112 bits (280), Expect = 2.040e-27 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = 1
Query: 25 LTRTGKDTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKF------GDLSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLEMSSGPVN 447
+T T P W + IDR ML ++ PILMYD++ L+E + D+GV + +K RVMP WFVLLR+WLRVDGV++++F+TR F F G + V RE + ++ +L RG DP+ +P+A+ A VL + GPV+
Sbjct: 111 VTTTSDSNRQPPTWELTDRR-IDRAMLTERD-PILMYDELTLYESELDDNGVAHLGLKVRVMPKCWFVLLRFWLRVDGVLIRLFETRFFCDFTEVDRTGAVVVVRETQRREETWDALHARGAPCDPTQFPDADQAASVLLAAGGPVD 255
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A0C9RYV1_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_2233_1410 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RYV1_9SPER) HSP 1 Score: 107 bits (268), Expect = 2.270e-25 Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 34 TGKDTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKF-GDLS----VFRERTQHSVSFTSLEQRGLSTDPSAY 393
T K T ++WVACE + + PIL YD+VVL+ED + D+GV ++VK RVMP WF+LLR+WLRVDGV+M+V DTR + F D+ V RE T+ +F +L RG S+D SAY
Sbjct: 153 TTKATNQTLKWVACEDH--INMVAVQSKDPILFYDEVVLYEDELADNGVSLLTVKVRVMPTCWFLLLRFWLRVDGVLMRVRDTRIYCAFESDVKRMPVVIRECTRREDTFKALAARGFSSDSSAY 275
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Match: A0A2R6WRF9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRF9_MARPO) HSP 1 Score: 107 bits (268), Expect = 3.410e-25 Identity = 59/122 (48.36%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 43 DTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLFEDFIHDHGVVRMSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGDLS-----VFRERTQHSVSFTSLEQRGLSTDPSAY 393
D+ +EWV CE ID + L Q PIL +D+V+LFED + D+G+ ++VK RVMP WF+LLRYWLRVDGV+M++ DTR F KF V RER +F SL RG D AY
Sbjct: 177 DSHPALEWVECEEQ-IDL-VSLQQRDPILFFDEVILFEDELADNGISLLTVKVRVMPKCWFLLLRYWLRVDGVLMRLRDTRVFSKFSSDPKEVPVVLRERCVKEDTFQSLASRGYPKDAGAY 296 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13418.2562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13418.2562.1 >prot_E-fasciculatus_F_contig13418.2562.1 ID=prot_E-fasciculatus_F_contig13418.2562.1|Name=mRNA_E-fasciculatus_F_contig13418.2562.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp QNGDILQPLTRTGKDTETPVEWVACEPGGIDRRMLLDQSSPILMYDDVVLback to top mRNA from alignment at E-fasciculatus_F_contig13418:253..1595+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13418.2562.1 ID=mRNA_E-fasciculatus_F_contig13418.2562.1|Name=mRNA_E-fasciculatus_F_contig13418.2562.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1343bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13418:253..1595+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13418:253..1595+ >mRNA_E-fasciculatus_F_contig13418.2562.1 ID=mRNA_E-fasciculatus_F_contig13418.2562.1|Name=mRNA_E-fasciculatus_F_contig13418.2562.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13418:253..1595+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |