mRNA_E-fasciculatus_F_contig1340.2550.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1340.2550.1 vs. uniprot
Match: A0A6H5JA20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA20_9PHAE) HSP 1 Score: 1103 bits (2854), Expect = 0.000e+0 Identity = 680/860 (79.07%), Postives = 703/860 (81.74%), Query Frame = 3
Query: 39 MLRLGGPMRVGGAKGGTMSECIAELQESSLPDAFKLAQVRSLLRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQ---------------DYDEKRLDWKKQKKSVINAIGSMTARTLRFEDKERKTIALHALAYYKSIMATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADSILKMLKDIRKTVRVSSKLQQGPNSFAQFLEEARSARMLNRLLF--------------WWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNDNASIDQHLPTGYLSEKLPPEAAGSPPSDESKTPEETSSRAVPGGVQRLALVTEASKQQQQLQQQGMKRERDSYSSEESELSSLPTPVVIGDDCKLSPAIERLVLDHRQEXXXXXXXXXXXRHQ----QRVSFTDQLEVTTSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRTKPPALTLSADGEEAAGRRVGGNSGGINMNPQRSPASGGLRSPGTRMLGMGVDGGSGFPSR----------------------VSWEEESQGTAGTMDTAEMMHAQHTVSFSGIPDSDDDGGHDXXXXXXXXXXXDLFEAADNLDLGAVDLCATGTGADGQTAYKDQDDMRLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRRLAVSPRPPSPMHKLATFGTLPNGFSSSSTRKSPRASATTSTSTSMITAATTNPFALKPGVSSGVRLRTPSSRSRGDVRSAVKAKAKTVTRRRVSAERDAVTARDRLLSSDNTAYGRCKTPLARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRALKSPGARGFTRGAFFG 2453
MLR+GGPMR+GGA GGTMSECIAELQESSLPDAFKLAQVRSL+RYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQ DYDEKRL+WKKQKKSVINAIGSMTARTLRFEDKERKTIALHALA+YKSIMATDDGAIPGESESTDALIEQYKRHRSEISKIPMYAD ILKMLKDIRKTVR SSKLQ GPNSFAQFLEEAR A M NR LF WWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDN ASIDQHLPTGYL E+LPP+AAGSPPSDESKTPEETSS V GGVQ QQGMKRERDS SSEESELSSLP PVVIGDDCKLSPAIERLVLD RQEXXXXXXXXXXX QRVSFTD LEV+ SG XXXXXXXX GRTKPPALT SAD E+A G RVGGNSGGIN P +SPASGGL SPGTRMLG+G +GGSGFPSR VSWEEESQGTAGTMDTAEM HAQH VSFSGIPDS XXXXXXXXXXX+LFEAADNLDLGAVDLCATG GADGQT YKDQD++RLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRR+AVSPR PSPMHKL TFG+LP+GFSSSS+R SPRASA T T+NPFALKPGVSSGVRLRTPSSRSR +VRSAVK KAKTVTRRR+SAERDA TARDRLLS+DNTAYGR KTPLARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRALKSPG RGFTRGAFFG
Sbjct: 1 MLRVGGPMRIGGATGGTMSECIAELQESSLPDAFKLAQVRSLVRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQARDSKGQHRQTEPIKDYDEKRLEWKKQKKSVINAIGSMTARTLRFEDKERKTIALHALAFYKSIMATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADRILKMLKDIRKTVRASSKLQPGPNSFAQFLEEARPAPMFNRSLFVTLLPKCCSVASRKWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDN--ASIDQHLPTGYLPEELPPKAAGSPPSDESKTPEETSSITVSGGVQ----------------QQGMKRERDSCSSEESELSSLPAPVVIGDDCKLSPAIERLVLDPRQEXXXXXXXXXXXXXXXXXXQRVSFTDHLEVSASGGTSTMARSSSIVRSTALTVATGXXXXXXXXSC-GRTKPPALTWSADREDACGSRVGGNSGGIN--PLKSPASGGLSSPGTRMLGIGGEGGSGFPSRKNTHASCLGKTKHPLDFLYARKVSWEEESQGTAGTMDTAEM-HAQHAVSFSGIPDSXXXXXX-XXXXXXXXXXXELFEAADNLDLGAVDLCATGNGADGQTTYKDQDELRLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRRMAVSPRAPSPMHKLTTFGSLPSGFSSSSSRTSPRASAXXXXXXXAST--TSNPFALKPGVSSGVRLRTPSSRSRAEVRSAVKTKAKTVTRRRMSAERDAGTARDRLLSADNTAYGRGKTPLARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRALKSPGVRGFTRGAFFG 835
BLAST of mRNA_E-fasciculatus_F_contig1340.2550.1 vs. uniprot
Match: D7FGW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW7_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 2.460e-169 Identity = 287/315 (91.11%), Postives = 295/315 (93.65%), Query Frame = 3
Query: 39 MLRLGGPMRVGGAKGGTMSECIAELQESSLPDAFKLAQVRSLLRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQDYDEKRLDWKKQKKSVINAIGSMTARTLRFEDKERKTIALHALAYYKSIMATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADSILKMLKDIRKTVRVSSKLQQGPNSFAQFLEEARSARMLNRLLFWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNDNASIDQHLPTGYLSEKLPPEAAGSPPSDESKTPEETSS 983
MLR+GGPMRVGGA GGTMSECIAELQESSLPDAFKLAQVRSL+RYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQDYDEKRL+WK+QKKSVINAIGSMTARTLRFEDKERKTIALHALA+YKSIMATDDGAIPGESESTD+L+EQYKRHRSEISKIPMYADSILKMLKDIRKTVR SSKLQ G NSFAQFLEE WWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDN ASIDQHLP GYLSE+LPPEAAG PPSDESKTPEETSS
Sbjct: 1 MLRVGGPMRVGGATGGTMSECIAELQESSLPDAFKLAQVRSLVRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQDYDEKRLEWKRQKKSVINAIGSMTARTLRFEDKERKTIALHALAFYKSIMATDDGAIPGESESTDSLMEQYKRHRSEISKIPMYADSILKMLKDIRKTVRASSKLQPGTNSFAQFLEE------------WWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDN--ASIDQHLPVGYLSEELPPEAAGFPPSDESKTPEETSS 301
BLAST of mRNA_E-fasciculatus_F_contig1340.2550.1 vs. uniprot
Match: D7FGW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW6_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 6.030e-164 Identity = 305/357 (85.43%), Postives = 315/357 (88.24%), Query Frame = 3
Query: 1383 GRTKPPALTLSADGEEAAGRRVGGNSGGINMNPQRSPASGGLRSPGTRMLGMGVDGGSGFPSRVSWEEESQGTAGTMDTAEMMHAQHTVSFSGIPDSDDDGGHDXXXXXXXXXXXDLFEAADNLDLGAVDLCATGTGADGQTAYKDQDDMRLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRRLAVSPRPPSPMHKLATFGTLPNGFSSSSTRKSPRASATTSTSTSMITAATTNPFALKPGVSSGVRLRTPSSRSRGDVRSAVKAKAKTVTRRRVSAERDAVTARDRLLSSDNTAYGRCKTPLARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRALKSPGARGFTRGAFFG 2453
GRTKPPALT SADGEEA GRRVGGNSGGIN P +SPASGGLRSPGTRMLG+G +GGSGFPSRVSWEE S AEM HAQH VSFSGIPDSDD XXXXXXXXXXX LFEAADNLDLGAVDLCATG GADGQT YKDQD++RLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRR+AVSPR PSPMHKL TFGTLP+GFSSSS+R SPR SATT TS M A TTNPFALKPGVSSGVRLRTPSSRSR +VRSAVK KAKTVTRRR+SAERDA TARDRLLSSDNTAYGR KTPLARSMSVYIPSSRSQTTPVHRASKTPTVKSSRR LKSPG RGFTRGAFFG
Sbjct: 26 GRTKPPALTWSADGEEAGGRRVGGNSGGIN--PLKSPASGGLRSPGTRMLGIGGEGGSGFPSRVSWEEGSXXXXXXXXXAEM-HAQHAVSFSGIPDSDDXXXXXXXXXXXXXXXXXLFEAADNLDLGAVDLCATGKGADGQTTYKDQDEVRLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRRMAVSPRAPSPMHKLTTFGTLPSGFSSSSSRTSPRTSATTITS--MTAATTTNPFALKPGVSSGVRLRTPSSRSRAEVRSAVKTKAKTVTRRRMSAERDAGTARDRLLSSDNTAYGRGKTPLARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRTLKSPGVRGFTRGAFFG 377
BLAST of mRNA_E-fasciculatus_F_contig1340.2550.1 vs. uniprot
Match: D7FGX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX8_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.230e-97 Identity = 178/273 (65.20%), Postives = 221/273 (80.95%), Query Frame = 3
Query: 60 MRVGGAKGGTMSECIAELQESSLPDAFKLAQVRSLLRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQDYDEKRLDWKKQKKSVINAIGSMTARTLRFEDKERKTIALHALAYYKSIMATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADSILKMLKDIRKTVRVSSKLQQGPNSFAQFLEEARSARMLNRLLFWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNDNAS 878
MRVGG + GTM +CIAE+++S+LP FKL QVRSL+RY++EV L R I ESGFEAD +YLEILC KE+ +L R+VS TRVL+QD+DEKR +W++ KK+VINAI M+AR L+FE E+KTIALHA+ +YK++MA D+GAIPGESESTD LI+QY+RHR EISKIP YADSI+KMLKDIR+TV S+KLQ G N+F QFL+E WWASVV+FL+QS IV+AE+NAREVMQTLKKLKGKQEE KKRE+SRL++KL+ D A+
Sbjct: 2 MRVGGTR-GTMQQCIAEIEDSALPQDFKLKQVRSLVRYMREVDGLVRGINSESGFEADCTAYLEILCTKEESELNRRVSCTRVLKQDFDEKRREWRRTKKNVINAISEMSARALKFECSEKKTIALHAIQFYKNVMANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQPGSNAFTQFLDE------------WWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKAT 261
BLAST of mRNA_E-fasciculatus_F_contig1340.2550.1 vs. uniprot
Match: A0A6H5JCK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK0_9PHAE) HSP 1 Score: 178 bits (451), Expect = 4.990e-44 Identity = 95/138 (68.84%), Postives = 112/138 (81.16%), Query Frame = 3
Query: 465 MATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADSILKMLKDIRKTVRVSSKLQQGPNSFAQFLEEARSARMLNRLLFWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNDNAS 878
MA D+GAIPGESESTD LI+QY+RHR EISKIP YADSI+KMLKDIR+TV S+KLQ G N+F QFL+E WWASVV+FL+QS IV+AE+NAREVMQTLKKLKGKQEE KKRE+SRL++KL+ D A+
Sbjct: 1 MANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQPGSNAFTQFLDE------------WWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKAT 126 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1340.2550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1340.2550.1 >prot_E-fasciculatus_F_contig1340.2550.1 ID=prot_E-fasciculatus_F_contig1340.2550.1|Name=mRNA_E-fasciculatus_F_contig1340.2550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=806bp MLRLGGPMRVGGAKGGTMSECIAELQESSLPDAFKLAQVRSLLRYIKEVGback to top mRNA from alignment at E-fasciculatus_F_contig1340:1373..14770- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1340.2550.1 ID=mRNA_E-fasciculatus_F_contig1340.2550.1|Name=mRNA_E-fasciculatus_F_contig1340.2550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=13398bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1340:1373..14770- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1340:1373..14770- >mRNA_E-fasciculatus_F_contig1340.2550.1 ID=mRNA_E-fasciculatus_F_contig1340.2550.1|Name=mRNA_E-fasciculatus_F_contig1340.2550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4836bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1340:1373..14770- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |