mRNA_E-fasciculatus_F_contig134.2549.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: D7G467_ECTSI (Mitochondrial helicase twinkle n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G467_ECTSI) HSP 1 Score: 1251 bits (3236), Expect = 0.000e+0 Identity = 610/634 (96.21%), Postives = 624/634 (98.42%), Query Frame = 2
Query: 230 MEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAGYVEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRELPGPAN 2131
MEFR+AGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNT PRRT GEEFHV QQRAAGLRPIPDEQRAR+YPTNLLHNPRFDQV+DYLSGTEPGQRGIKKEVLVKYGVGCAVY+YPGEAGYVEAQSITFPWIVNKKDIPPEEVKGLE+FVKDKYG++S IPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQ+FLDGASSTKHDDIQTFQDLRQ VIHELQNPLEYSGTGLQSFPRFT+IIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPV +LAGSP+SLRAVADRFQALPLSFLRFHGGT+VDEV+DAMDYAVYANDVQHIILDNLQFMLTR SREG G KRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRELPGPA+
Sbjct: 1 MEFRVAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTPNPRRTHGEEFHVTQQRAAGLRPIPDEQRARSYPTNLLHNPRFDQVMDYLSGTEPGQRGIKKEVLVKYGVGCAVYKYPGEAGYVEAQSITFPWIVNKKDIPPEEVKGLEKFVKDKYGEKSRIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQDFLDGASSTKHDDIQTFQDLRQKVIHELQNPLEYSGTGLQSFPRFTRIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVADLAGSPDSLRAVADRFQALPLSFLRFHGGTNVDEVIDAMDYAVYANDVQHIILDNLQFMLTRNSREGHGGKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRELPGPAS 634
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A835ZLV9_9STRA (Mitochondrial helicase twinkle n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLV9_9STRA) HSP 1 Score: 734 bits (1896), Expect = 3.160e-253 Identity = 377/655 (57.56%), Postives = 467/655 (71.30%), Query Frame = 2
Query: 161 STFVSKHHVLEQTDVVAFLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAGYVEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPG--PFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKED-EGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSL-EVKKNRFDGDLGEVHLVFDPHSSRLRE 2113
+TFVS+H L +D+ +L K+ +E+R+AG +V VK CPFCHDT G+ DNMWKLY G +GGA+ CHRC ++GSWYD KRR G + A+ RSS+ + TR E +P+P+++ ARAY L+ +P +V ++L+G PGQRGI + VL+KYGVG AVY +P E GY EA +TFPW + ++ EE L + G D+V R+K RAV NK WQRLDPAGGRWG+FG HTVP ATEVVLTEGE+DA+AVYQATG PAVSLPNG SLP++VLP+LERF IYLWMD+D GQ G KF KLG RR +VRP DD P KDANEALLAG++L L A + D+I F DLR++V+HE+ NP+E+ GT L+SFPR T+I+KG R+GEL+V TG TG+GKTT+LSQ+SLDLA G+STLWGSFE++NTRL++KML QF GRP LAG +L A+ DRF+ALPL F+ FHGGTDVDEVL+AM+YAVY NDV HIILDNLQFML SR +KR G +DKFDAQD+A++KFRKFATE NVHITLVIHPRKED E +L+ +S+FGSAK TQEADLV+ILQ G + L EV+KNRFDG +G V L FD S LRE
Sbjct: 22 TTFVSRHVQLPLSDITEYLRKKDLEYRVAGSQVNVKRCPFCHDTRGQIDNMWKLYFGAESGGAYFCHRCGSNGSWYDFKRRVGGVEMTGLDAAALERSSSGS--------TRAGEHDTPG------KPMPNQRLARAYAGQLMSHPGKARVREFLTGKAPGQRGIDRAVLLKYGVGSAVYSFPTEHGYREADCVTFPWHALRTEMSTEEFTELLAGTEADSGAGGQPVDSVITRLKVRAVDNKAWQRLDPAGGRWGLFGWHTVPPDATEVVLTEGEFDALAVYQATGVPAVSLPNGCRSLPVDVLPMLERFTTIYLWMDNDAPGQEGAAKFARKLGERRVRIVRPPADDAAPAKDANEALLAGKDLAALLAAARPLQRDEILHFSDLRESVLHEIMNPMEFVGTPLESFPRLTEIVKGFRQGELSVFTGGTGAGKTTVLSQISLDLARRGVSTLWGSFEVRNTRLVKKMLQQFGGRPPEALAGDAPALSALMDRFEALPLCFMGFHGGTDVDEVLEAMEYAVYVNDVSHIILDNLQFML---SRSATSAKRGGMAQWDKFDAQDIAMEKFRKFATERNVHITLVIHPRKEDDEKQRLSLTSVFGSAKMTQEADLVLILQRVAGERKLIEVRKNRFDGAVGSVPLYFDRDSGCLRE 659
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A8K1FKX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKX8_PYTOL) HSP 1 Score: 605 bits (1561), Expect = 5.520e-201 Identity = 329/658 (50.00%), Postives = 426/658 (64.74%), Query Frame = 2
Query: 146 TYRQSSTFVSKHHVLEQ-TDVVAFLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAG-YVEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRE 2113
T SSTFVS ++ L+ T++++F+D++ + R VVKECPFCH T GK DN++KLYI + G + CHRC A+GSW+D K++ G S M + PR A + + D Q+A A NL +P F+ + YL +RGI ++VL+KYGVG + E G V A+ I+FPW+ + D+ V Q + +R+K RA+ +K QRL P GG WG+FG +TVP A E+V+TEGE+DAMAVYQATG PAVSLPNG SLP VLPLLERF KIYLWMD+D GQA V+KF KLG RC +VRP D P KDAN+ALLAG +L++ + A HD I TF+ LR++V E+ NP+ G ++ P +++KG R GE+T+LTGPTG GKTT+LSQLSLDL G++TLWGSFEIKNTRL+ KML Q AG+ L G + AVAD+F+ALP+ FLRF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+ + +GRG +DKF+ QD ALDKFRKFA++ NVH+TLVIHPRKE E LT +S+FG+AKATQEAD V+ILQ +G L+V+KNRFDG LG + L+FD S+ L+E
Sbjct: 3 TVGNSSTFVSSYYQLDDATEILSFMDRKGLVRRETDSHWVVKECPFCHPTRGKVDNLFKLYIHKSKG-VYKCHRCGAAGSWFDFKQKL-QGNVSVGSVGGMLHGDGGPGASLDPRE-------------AKVISVLDNQKAMAIQRNLFDDPDFEPIRQYLIE----KRGISEQVLMKYGVGAIEQPFRNENGEQVVAKCISFPWMARQGDLDTMGVLRSSSSPSSADKNQFDV-----IRLKIRALEDKSQQRLVPKGGSWGLFGWNTVPTSAEEIVVTEGEFDAMAVYQATGMPAVSLPNGCQSLPPNVLPLLERFKKIYLWMDNDAPGQASVEKFATKLGITRCFIVRPPADSKKPIKDANDALLAGADLKKLIHLAEIIPHDQIATFEQLRRDVYEEIVNPIRACGVQSRTLPSLNRLLKGHRLGEVTILTGPTGCGKTTLLSQLSLDLCGQGVNTLWGSFEIKNTRLIHKMLTQLAGK---NLRGDVNAFEAVADKFEALPMYFLRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNVQFMM---AGQGRG------YDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQRTRGQTKLDVRKNRFDGTLGSLPLMFDADSNCLKE 624
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: K3WZ52_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ52_GLOUD) HSP 1 Score: 603 bits (1556), Expect = 2.470e-200 Identity = 333/659 (50.53%), Postives = 427/659 (64.80%), Query Frame = 2
Query: 161 STFVSKHHVLEQTDVVA-FLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAGYVE-AQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTV-RVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLE----DDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREL 2116
+TFVS ++ LE +A FL ++ + R VV++CPFCH T GKADN++KLY+ G + CHRC ASGSW+D K ++ S +A+ N+ G +A+ + D +A A NLL P F V+ YL+ T RGIKKEVL KYGVG + + G +E ++ I+FPW+ ++D+ + G+ + D QSG + V R+K RAV +K QRL P GG WG+FG +TVP + E+V+TEGE+DAMAVYQATG PA+SLPNG SLP VLPLLERF KIYLWMD+D +GQA V+KF K+G RC +VRP P KDAN+ALLAG +L + A H I TF +LR+ V E+ NPL G ++ P +++KG R GE+TVLTGPTG GKTT+LSQLS+DL G+STLWGSFEIKNTRLM KML+Q AGR L G + + AD+F+ALP+ F+RF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+ + +GRG FDKF+ QD ALDKFRKFA++ NVH+TLVIHPRKE E LT +S+FG+AKATQEAD V+ILQ +GN L+V+KNRFDG LG + L FD S+ LREL
Sbjct: 11 NTFVSSYYQLEDPQEIAEFLGRKKLVSRETDTHFVVRDCPFCHPTHGKADNIFKLYVQKAQG-VYKCHRCGASGSWFDFK-------SKLQSNIAV--------NSMEGVMHGGGASSIAEAMLPKVIQALDNAKAMAIQQNLLEEPEFQSVLRYLTET----RGIKKEVLQKYGVGAIEQPFRNDVGDLETSKCISFPWMARQQDL---DAMGV---ICDSETPQSGDKNLFNVIRLKIRAVDDKAKQRLVPKGGSWGLFGWNTVPTASDEIVITEGEFDAMAVYQATGMPAISLPNGCQSLPPSVLPLLERFKKIYLWMDNDASGQANVEKFSSKIGVTRCYIVRPSPPVGAQRTKPIKDANDALLAGLDLGAIVRAAERIPHSQITTFDELRREVYEEILNPLRACGVQSRTLPSLNRLLKGHRMGEVTVLTGPTGCGKTTLLSQLSIDLCGQGVSTLWGSFEIKNTRLMHKMLNQLAGR---SLQGDINAFESAADKFEALPMYFMRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNIQFMM---AGQGRG------FDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQRTRGNSKLDVRKNRFDGTLGSIPLTFDSESNCLREL 631
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: B8LE42_THAPS (Predicted protein n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LE42_THAPS) HSP 1 Score: 594 bits (1531), Expect = 2.040e-197 Identity = 325/704 (46.16%), Postives = 428/704 (60.80%), Query Frame = 2
Query: 119 LRPPPIAAETYRQSSTFVSKHHV---LEQTDVVAFL---------DKRSMEFRLAGGEVVVKECPFC-HDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFD---QVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAG-------YVEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLED---DPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFA-----------GRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRELP 2119
L PP +T ++ FVS+H+ L + +++ D S +FR V+++ECPFC T G+ DN +KLY+ + GGA+ CHRC A GSWYD K G ++ + S + N+ + + G + + ++ + N +N + ++ YL+ T RG+ + VL KYGVGCA Y + + G YV + +TFP + IP R+K R++ K WQRLDP GG +G+FG HTVP ATE+++TEGE+DAMAVYQATG+PAVSLPNG SLP+EVL LLE F+ +YLWMD+DG G+ G + F KLG RCL+V+P P PPKDANEALL G ++ E L+ AS H+ I F DLR VIHE+ NP +Y GT + S P FT +IKG RRGELTVLTGPTGSGKTT L Q SLDL G++ LWGSFEIKNTRLM K+L Q+ V E + +L ++AD+F++LP+ F++FHGG+DVD+VLDAM+YA Y +DV+HIILDN+QFM++R S EG+GS FDKFD QD+A++KFRKFATE+NVH+TLV+HPRKEDEG KL SS +GSAKATQEAD V+ILQ+ K ++VKKNRFDG +G L F S R E P
Sbjct: 43 LTPPSSHQQTTHRTKVFVSRHNNTLNLAPHQITSYITQQLPHLSTDASSSDFRYTSSHVILQECPFCPKPTKGRVDNQYKLYVSVG-GGAYFCHRCGAKGSWYDFKSELGG--------FSVEQHSNACANSDSSGQ-------------GGRQQASNSINSQPWNWNTKNNNGMNYLGSILQYLTNT----RGLDRSVLRKYGVGCASYNFHSKDGSTVSGASYVSSMCVTFPCSTHGPYIPR--------------------------RIKVRSIEKKAWQRLDPPGGGFGLFGWHTVPHNATEIIITEGEFDAMAVYQATGRPAVSLPNGCRSLPMEVLLLLENFDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPEPPKDANEALLTGWDINELLEEASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVLTGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDLSVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQFMISRQSVEGKGSS----FDKFDMQDIAIEKFRKFATEYNVHVTLVVHPRKEDEGAKLGMSSFYGSAKATQEADTVLILQSDGKRKFVDVKKNRFDGTIGHSPLYFQRKSGRYSENP 690
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A5D6XVL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVL9_9STRA) HSP 1 Score: 596 bits (1537), Expect = 5.360e-197 Identity = 329/668 (49.25%), Postives = 427/668 (63.92%), Query Frame = 2
Query: 134 IAAETYRQSSTFVSKHHV-LEQTDVVAFLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAG-YVEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTV-RVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRP----LEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREL 2116
+++ T STFVS +H E D+ AFL ++ + R VV+ECPFCH T G+ADN++KLY+ G + CHRC ASGSW+D K ++ S V + + G +A A + D +A A NLL P F V+ YL TE QRGI+ +VL KYGVG + E G V A+ I+FPW+ + D+ V + + G +G + V R+K RAV +K QRL P GG WG+FG +TVP + E+V+TEGE+DAMAV+QATG PA+SLPNG SLP VLPLLERF+K++LWMD+D +GQA V+KF K+G RC +VRP + P KDAN+ALLAG +L + + GA H I TF +LR+ V E+ NPL G ++ P +++KG R GE+TVLTGPTG GKTT+LSQLS+DL G+STLWGSFEIKNTRL+ KML+Q AGR L G ++ AD+F+ALP+ F+RF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+ + +GRG FDKF+ QD ALDKFRKFA++ NVH+TLVIHPRKE E LT +S+FG+AKATQEAD V+ILQ +G L+V+KNRFDG LG + L +D SS L+E
Sbjct: 22 LSSGTQVNRSTFVSSYHQPAEPHDIAAFLSRKLLPARETDTHFVVRECPFCHPTHGRADNLFKLYVHKAQG-VYKCHRCGASGSWFDFK-------SKLQSNVGVSSADGVLH---------GGGNSIADAAAPKVIQALDNAKAMAIQKNLLEEPEFKAVLTYL--TE--QRGIRLDVLQKYGVGAIEQPFRNENGDQVPAKCISFPWMARQHDLDAMGVICDDLASRPAGGTANGDKNLFNVIRLKIRAVDDKSKQRLVPKGGSWGLFGWNTVPTASDEIVITEGEFDAMAVHQATGLPAISLPNGCQSLPPSVLPLLERFSKVFLWMDNDASGQANVEKFASKIGVARCYIVRPSAASVTTAGKPVKDANDALLAGLDLAQIMHGAERIPHSQITTFDELRREVYEEILNPLRACGVQSRTLPSLNRLLKGHRMGEVTVLTGPTGCGKTTLLSQLSIDLCGQGVSTLWGSFEIKNTRLIHKMLNQLAGR---SLEGDIKAFEGAADKFEALPMYFMRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNIQFMM---AGQGRG------FDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQRTRGKSKLDVRKNRFDGTLGSIPLGYDSESSSLKEF 656
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A1Z5K003_FISSO (SF4 helicase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K003_FISSO) HSP 1 Score: 591 bits (1523), Expect = 9.260e-197 Identity = 321/677 (47.42%), Postives = 438/677 (64.70%), Query Frame = 2
Query: 152 RQSSTFVSKHHV---LEQTDVVAFLD---KRSMEFRLAGGEVVVKECPFC-HDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEAGYVEAQSITFPWIVNKKDIP-PEEVKGLEQFVKDKYGKQSGIPDA-VTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATE---VVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDP------NPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPES---LRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRELP 2119
R S FVSKH+ + D++ + + S ++R V+++ECPFC T GKA+N +KLYI L GGA+ CHRC GSW+D K A+ + +S++ T + + A+ P+P + Y + LL P D V+ YL+ T RG+ + L KYG+G A Y + + + + +TFPWI+ D+ EE++G++ V+D P++ +T R+K RA+ NK WQRLDPAGG WG FG HT+ DGA + +V+TEGEYDAMAV+QATG PA+SLPNG SLP+EVLPLLE + KIYLWMD+DG GQ G F K+G RC +V+P + + PKDAN+ALL G +L+ + A H+ + +F DL+ +V+HE+ +P +Y GT L S P+F+ ++KGLRRGELTV+TGPTGSGKTT L Q+SLDLA G++ LWGSFE++NTRL+ K+L QFA +P+ G P S L+ +A RF LPL FL+FHG ++++EVLDAM+YAVY +D +HI+LDNLQFM++R + R FDKFDAQD+A++KFRKFATE NVH++LV+HPRKEDE +L SSI+GSAKATQEAD V+ILQ K L+V+KNRF GDLG + FD ++R RE P
Sbjct: 20 RHKSVFVSKHNQSLNVTAEDIINQVKWNVESSPKYRTTNNHVILEECPFCTKPTKGKAENTFKLYIQLG-GGAYFCHRCGQGGSWFDFK-------AKTSKDPQVVKSASQT-------------IYSPKMHASQPLPMPSSRLQALYNSQLLDQPDND-VLRYLTET----RGLTVKTLRKYGIGRAKYSFNNDGAWEPVECVTFPWIMKASDVSFQEELRGVKHPVED--------PNSFLTRRIKVRALENKAWQRLDPAGGGWGFFGYHTL-DGADKSQPIVVTEGEYDAMAVWQATGIPAISLPNGCRSLPVEVLPLLEDYEKIYLWMDNDGPGQEGARVFSQKIGLGRCFMVQPTLESTGCLEFADLPKDANDALLQGHDLKRIIMEAKPVPHEQVLSFSDLQDSVLHEILHPEKYEGTKLPSLPKFSAVVKGLRRGELTVVTGPTGSGKTTFLGQMSLDLAEQGVNVLWGSFEVRNTRLIHKLLQQFARQPLPR--GDPSSADKLKDIAKRFGELPLHFLKFHGASELEEVLDAMEYAVYVHDCEHIVLDNLQFMISRQNLASRSGN--SNFDKFDAQDIAIEKFRKFATERNVHLSLVVHPRKEDESARLGISSIYGSAKATQEADNVLILQKDNQKKYLDVRKNRFSGDLGATEIFFDRATNRYREAP 657
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A329SI58_9STRA (Twinkle protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI58_9STRA) HSP 1 Score: 587 bits (1513), Expect = 7.580e-194 Identity = 330/658 (50.15%), Postives = 428/658 (65.05%), Query Frame = 2
Query: 158 SSTFVSKHHVLEQT-DVVAFLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRA-GSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRY-PGEAGY-VEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVR-PLEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREL 2116
+ FVS+H+ ++ DV FL ++S+ R VV++CPFCH T GK DN++K+Y+ G + CHRC A+GSW+D KR+ GS G S S N PR + E V Q D ++A A NLL +P F V+ YL+ RG+ KEVL KY VG + +AG V AQ I+FPW+ + D+ V + Q K + + + D V R+K RA+ +K Q+L P GG WG+FG +TVP A ++VLTEGE+DA+AV+QATG AVSLPNG SLP VLPLLERF +IYLWMD+D +GQ+ V+KF KLG RC +VR P + KDAN+AL AG +L ++GA H I TF++LR++V E+ NPL+ G ++FP +++KG R GE+TVLTGPTG GKTT+LSQLSLDL G+STLWGSFEIKNTRL+ KML Q A R L+G ++ A ADRF+ALP+ FLRF G T+VDEVLDAM+YAVYA DVQHI+LDN+QFM+ + +GRG FDKF+ QD ALDKFRKFA+ NVH+TLVIHPRKE E LT SS+FG+AKATQEAD V+ILQ +G L+++KNRFDG LG + L F+P S+ LRE+
Sbjct: 35 TEAFVSRHYQMQDPKDVAEFLQRKSLSVRETDSHFVVRDCPFCHATHGKTDNLFKMYVHKTQG-VYKCHRCGAAGSWFDFKRKLQGSVGVASSSSALYGGS-----NAGAPRASA--EVKVIQ--------ALDNEKAMAIQKNLLDDPEFQPVLKYLTDI----RGLSKEVLQKYCVGAIEQPFWDHDAGERVNAQCISFPWMARQMDMDAMGV--VCQDEKRQTTEDKNLYDVV--RLKLRAMDDKAKQQLVPKGGSWGLFGWNTVPTTAQDLVLTEGEFDAIAVHQATGMAAVSLPNGCQSLPPSVLPLLERFKRIYLWMDNDASGQSNVEKFAAKLGMARCYIVRLPANAASSSIKDANDALRAGLDLTAIVNGAERIPHSQITTFEELRRDVYEEIVNPLKACGVQSRAFPSLNRLMKGHRMGEVTVLTGPTGCGKTTLLSQLSLDLCGQGVSTLWGSFEIKNTRLLHKMLTQLAQR---NLSGDVKAFEAAADRFEALPMHFLRFFGSTNVDEVLDAMEYAVYAYDVQHILLDNVQFMM---AGQGRG------FDKFERQDAALDKFRKFASSKNVHLTLVIHPRKEQEDQDLTLSSVFGTAKATQEADNVLILQRTRGESKLDIRKNRFDGTLGSIPLKFEPDSASLREV 656
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A6A3F712_9STRA (Twinkle protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F712_9STRA) HSP 1 Score: 586 bits (1510), Expect = 2.740e-193 Identity = 328/658 (49.85%), Postives = 422/658 (64.13%), Query Frame = 2
Query: 158 SSTFVSKHHVLEQT-DVVAFLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRA-GSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRY-PGEAGY-VEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVR-PLEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREL 2116
+ F+S+H+ ++ DV FL ++S+ R VV++CPFCH T GKADN++K+Y+ G + CHRC A+GSW+D KR+ GS G SS E V Q D ++A A NLL +P F+ V+ YL+ RG+ KEVL KY VG + E+G V A+ I+FPW+ + D+ V +Q + + + D V R+K RAV +K Q+L P GG WG+FG +TVP A E+VLTEGE+DAMAV+QATG PAVSLPNG SLP VLPLLERF +IYLWMD+D +GQ+ V+KF KLG RC +VR P +P KDAN+AL AG +L + A H I TF++LR++V E+ NPL G ++FP +++KG R GE+TVLTGPTG GKTT+LSQLSLDL G+STLWGSFEIKNTRLM KML Q A R L+G + A AD+F+ALP+ FLRF G T+VDEVLDAM+YAVYA DVQHI+LDN+QFM+ + +GRG FDKF+ QD ALDKFRKFA+ NVH+TLVIHPRKE E LT +S+FG+AKATQEAD V+ILQ +G L+++KNRFDG LG + L FDP S+ L E+
Sbjct: 40 TEAFMSRHYQMQDPRDVGDFLRRKSLAVRETDSHFVVRDCPFCHTTHGKADNLFKMYVHKTQG-VYKCHRCGAAGSWFDFKRKLQGSVGVASAGSALYGGSSAGAPGFSA-------EVKVIQ--------ALDNEKAMAIQKNLLDDPEFESVLKYLTDV----RGLSKEVLQKYCVGAIEQPFWDHESGERVNAKCISFPWMARQMDMGAMGVVCQDQ--QKPATEDKNLYDVV--RLKIRAVEDKAKQQLVPKGGSWGLFGWNTVPTAANELVLTEGEFDAMAVHQATGIPAVSLPNGCQSLPPSVLPLLERFKRIYLWMDNDASGQSNVEKFASKLGMTRCYIVRMPANASSSPAKDANDALRAGLDLGAIVKSAERIPHSQITTFEELRRDVYEEIVNPLRACGVQSRAFPSLNRLMKGHRMGEVTVLTGPTGCGKTTLLSQLSLDLCGQGVSTLWGSFEIKNTRLMHKMLTQLAQR---NLSGDVNAFEAAADQFEALPMYFLRFFGSTEVDEVLDAMEYAVYAYDVQHILLDNVQFMM---AGQGRG------FDKFERQDAALDKFRKFASAKNVHLTLVIHPRKEQEDQDLTLTSVFGTAKATQEADNVLILQRTRGESKLDIRKNRFDGTLGSIPLKFDPDSASLCEV 661
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Match: A0A3M6VQT7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQT7_9STRA) HSP 1 Score: 586 bits (1510), Expect = 3.870e-193 Identity = 328/654 (50.15%), Postives = 423/654 (64.68%), Query Frame = 2
Query: 167 FVSKHHVLEQT-DVVAFLDKRSMEFRLAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTQTPRRTRGEEFHVAQQRAAGLRPIPDEQRARAYPTNLLHNPRFDQVVDYLSGTEPGQRGIKKEVLVKYGVGCAVYRYPGEA--GYVEAQSITFPWIVNKKDIPPEEVKGLEQFVKDKYGKQSGIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVR-PLEDDPNPPKDANEALLAGRNLQEFLDGASSTKHDDIQTFQDLRQNVIHELQNPLEYSGTGLQSFPRFTKIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVTELAGSPESLRAVADRFQALPLSFLRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRTSREGRGSKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREL 2116
FVS+H+ ++ DV FL ++S+ R +V++CPFCH T GKADN++K+Y+ G + CHRC ++GSW+D KR+ G VA ++ + N R EE V Q D ++A A NLL +P F+ V+ YL+ R + KEVL KY VG + V A+ I+FPW+ + D+ V E+ K + + D V R+K RAV +K Q+L P GG WG+FG +TVP A E+VLTEGE+DAMAV+QATG AVSLPNG SLP VLPLLE F +IYLWMD+D +GQ+ V+KF KLG RC +VR P + +P KDAN+AL AG +L ++ A H I TF++LR++V E+ NPL+ G ++FP +++KG R GE+TVLTGPTG GKTT+LSQLSLDL G+STLWGSFEIKNTRLM KML Q A R L+G + A ADRF+ALP+ FLRF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+ + +GRG FDKF+ QD ALDKFRKFA+ NVH+TLVIHPRKE EG+ LT SS+FG+AKATQEAD V+ILQ G L+++KNRFDG LG + L FD S+ LRE+
Sbjct: 42 FVSRHYQMQDPRDVADFLRRKSLALRETDSHFIVRDCPFCHATYGKADNLFKMYVHKTQG-MYKCHRCGSAGSWFDFKRKIQGG-----MDVASSANALYSGNNAGARSI--EEVKVIQ--------ALDNEKAMAIQKNLLDDPEFEPVLQYLTDV----RCLTKEVLQKYCVGAIEQPFWDHDLNKRVNAKCISFPWMARQMDMNAMGVVYQEE--KRHATEDKNLYDVV--RLKLRAVDDKVKQQLVPKGGSWGLFGWNTVPTAADELVLTEGEFDAMAVHQATGMAAVSLPNGCQSLPPSVLPLLESFKRIYLWMDNDASGQSNVEKFAAKLGLSRCYIVRIPAKASSSPVKDANDALRAGLDLTAIVNAAECIPHSQITTFEELRRDVYEEIVNPLKACGVQSRAFPSLNRLMKGHRMGEVTVLTGPTGCGKTTLLSQLSLDLCGQGVSTLWGSFEIKNTRLMHKMLRQLAQR---NLSGDVNAFEAAADRFEALPMHFLRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNVQFMM---AGQGRG------FDKFERQDAALDKFRKFASAKNVHLTLVIHPRKEQEGHDLTLSSVFGTAKATQEADNVLILQRTNGKSKLDIRKNRFDGTLGSIPLEFDLDSASLREV 659 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig134.2549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig134.2549.1 >prot_E-fasciculatus_F_contig134.2549.1 ID=prot_E-fasciculatus_F_contig134.2549.1|Name=mRNA_E-fasciculatus_F_contig134.2549.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=695bp MLRLVNRLCQPSRSKCTTAASARLRPPPIAAETYRQSSTFVSKHHVLEQTback to top mRNA from alignment at E-fasciculatus_F_contig134:31304..37525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig134.2549.1 ID=mRNA_E-fasciculatus_F_contig134.2549.1|Name=mRNA_E-fasciculatus_F_contig134.2549.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6222bp|location=Sequence derived from alignment at E-fasciculatus_F_contig134:31304..37525- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig134:31304..37525- >mRNA_E-fasciculatus_F_contig134.2549.1 ID=mRNA_E-fasciculatus_F_contig134.2549.1|Name=mRNA_E-fasciculatus_F_contig134.2549.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4170bp|location=Sequence derived from alignment at E-fasciculatus_F_contig134:31304..37525- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |