mRNA_E-fasciculatus_F_contig13373.2528.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: D7G1D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D6_ECTSI) HSP 1 Score: 385 bits (989), Expect = 3.180e-130 Identity = 185/204 (90.69%), Postives = 191/204 (93.63%), Query Frame = 1
Query: 1 FFLDPEGRVPFAGTVSFDFRSAPNALAEALSPPRVLAQVVKDCQTVFSARAKKLEYSTGETFWIQADAAPRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEASGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADLALPPLSKSLE 612
FFLDPEGRVPFAG VSFDFRSAPNALAEALSPP VLAQVVKDCQTVFSARAKKLEYSTGETFWIQA+AAPRNCLERLALD+F+ HTAGARFNQETSGAEWWTQVIED DDIGWHWDKDYGMEA GINVHPCLATVTYLS NGGPTVVLEKKGPM C D+ VSGEAAKAWVSRPALGKHICFDGRYLHAAPADLALPP + L+
Sbjct: 35 FFLDPEGRVPFAGNVSFDFRSAPNALAEALSPPEVLAQVVKDCQTVFSARAKKLEYSTGETFWIQANAAPRNCLERLALDVFKVHTAGARFNQETSGAEWWTQVIEDADDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDMEEVSGEAAKAWVSRPALGKHICFDGRYLHAAPADLALPPQTTGLD 238
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A6H5JMS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS0_9PHAE) HSP 1 Score: 379 bits (974), Expect = 7.120e-128 Identity = 185/204 (90.69%), Postives = 189/204 (92.65%), Query Frame = 1
Query: 1 FFLDPEGRVPFAGTVSFDFRSAPNALAEALSPPRVLAQVVKDCQTVFSARAKKLEYSTGETFWIQADAAPRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEASGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADLALPPLSKSLE 612
FFLDPEGRVPFAG +SFDFRSAP ALAEALSPP VLAQVVKDCQTVFSARAKKLEYSTGETFWI ADAAPRN LERLALDIF+AHTAGARFNQETSGAEWWTQVIED DDIGWHWDKDYGMEA GINVHPCLATVTYLS NGGPTVVLEKKGPM C DV VSGEAAKAWVSRPALGKHICFDGRYLHAAPADLALPP + L+
Sbjct: 35 FFLDPEGRVPFAGNLSFDFRSAPTALAEALSPPDVLAQVVKDCQTVFSARAKKLEYSTGETFWIAADAAPRNSLERLALDIFKAHTAGARFNQETSGAEWWTQVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFDGRYLHAAPADLALPPPTPCLD 238
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A835ZJA8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJA8_9STRA) HSP 1 Score: 218 bits (554), Expect = 4.400e-66 Identity = 114/197 (57.87%), Postives = 135/197 (68.53%), Query Frame = 1
Query: 7 LDPEGRVPFAGTVSFDFRSAPNAL--AEALSPPRVLAQVVKDCQTVFSARAKKLEY--STGETFWIQADAAPRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEASGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADLA 585
LD EGRVPFAGT+ + FRS AL + R L + +D ++VF + EY S GET+W+ ADA PR LE LA IF+ HT ARF++ SGAEWW QVI +DDIGWHWDKDY EASG NVHP LATVTYLS GGPTVVL K+ P+TCGD + G + +SRPA+GKH+CFDGRYLH APA LA
Sbjct: 24 LDDEGRVPFAGTLDYAFRSYTGALKLSGGGGAERDLQRARRDARSVFRVKEAGSEYGLSAGETYWMAADAEPRCALEALAQAIFKHHTRAARFDRAISGAEWWVQVIGGDDDIGWHWDKDYATEASGFNVHPHLATVTYLSDVGGPTVVLNKRDPVTCGD--SLEGTITRCCLSRPAVGKHMCFDGRYLHGAPAALA 218
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A813EE87_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EE87_POLGL) HSP 1 Score: 183 bits (465), Expect = 2.140e-54 Identity = 108/210 (51.43%), Postives = 133/210 (63.33%), Query Frame = 1
Query: 7 LDPEGRVPFAG--TVSFDFRSAPNALAEA-LSPPRVLAQVVKDCQTVFSARA--KKLEYSTGETFWIQADAAPRN--CLERLALDIFEAH-----TAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEAS-GINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAA--KAWVSRPALGKHICFDGRYLHAAPADLALP 591
+D +GRV G ++ FRS P L S LA +V DC+ F+ARA K YS GETFW+ A AAP + +ERLAL IF H ++G ++ SGAEWWTQVIE EDDIGWHWD+DYG+EA G+ +HP +ATVTYLS G PT+VLE P GD GG + A + +S P +GKHI FDGR+LHAAPADLA P
Sbjct: 44 IDVDGRVASLGGPLPNYSFRSFPQLLPVGDQSAKAALATLVGDCEKAFTARATAKGASYSRGETFWVPAGAAPESLSAIERLALAIFHLHVPKGDSSGCSYDASRSGAEWWTQVIETEDDIGWHWDRDYGLEADEGLRLHPHIATVTYLSEGGAPTIVLEAVEPPE-GDGGGATRPLAVERGHLSWPQVGKHISFDGRWLHAAPADLASP 252
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A4D9D1L4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1L4_9STRA) HSP 1 Score: 186 bits (471), Expect = 6.500e-54 Identity = 104/200 (52.00%), Postives = 135/200 (67.50%), Query Frame = 1
Query: 7 LDPEGRVPF-AGTVSFDFRSAPNAL----AEALSPPRVLAQVVKDCQTVFSARAKKL---EYSTGETFWIQADAAPRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEASGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADL 582
+D +GR+ F G V F FRS P A +A S VL+ ++ DC+ +ARA+ +YS GETF+I AD P+ LE LAL IF AHT A + + SGAEWW QV+E+EDDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ G+ +SG + AW+S PA+GKH FDGR LHAAPA+L
Sbjct: 80 VDGDGRLVFDGGHVDFSFRSFPAAFPCFCTDATSSS-VLSTLLHDCRLASTARAQAKAGGDYSEGETFFITADTEPKVQLEALALSIFRAHTTQAAYAEGQSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAEL 276
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A813KGZ6_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KGZ6_POLGL) HSP 1 Score: 181 bits (460), Expect = 1.480e-53 Identity = 107/208 (51.44%), Postives = 132/208 (63.46%), Query Frame = 1
Query: 7 LDPEGRVPFAG--TVSFDFRSAPNALAEA-LSPPRVLAQVVKDCQTVFSARA--KKLEYSTGETFWIQADAAPRN--CLERLALDIFEAH-----TAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEAS-GINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAA--KAWVSRPALGKHICFDGRYLHAAPADLA 585
+D +GRV G ++ FRS P L S LA +V DC+ F+ARA K YS GETFW+ A AAP + +ERLAL IF H ++G ++ SGAEWWTQVIE EDDIGWHWD+DYG+EA G+ +HP +ATVTYLS G PT+VLE P GD GG + A + +S P +GKHI FDGR+LHAAPADLA
Sbjct: 28 IDVDGRVASLGGPLPNYSFRSFPQLLPVGDQSAKAALATLVGDCEKAFTARATAKGASYSRGETFWVPAGAAPESLSAIERLALAIFHLHVPKGDSSGCSYDASRSGAEWWTQVIETEDDIGWHWDRDYGLEADEGLRLHPHIATVTYLSEGGAPTIVLEAVEPPE-GDGGGATRPLAVERGHLSWPQVGKHISFDGRWLHAAPADLA 234
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: K8YX42_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX42_NANGC) HSP 1 Score: 185 bits (469), Expect = 3.120e-53 Identity = 103/200 (51.50%), Postives = 136/200 (68.00%), Query Frame = 1
Query: 7 LDPEGRVPF-AGTVSFDFRSAPNAL----AEALSPPRVLAQVVKDCQTVFSARAKKL---EYSTGETFWIQADAAPRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEASGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADL 582
+D +GR+ F G V + FRS P A +A S VL+ ++ DC+ +ARA+ +YS GETF+I AD P+ LE LAL IF AHT+ A + + SGAEWW QV+E+EDDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ G+ +SG + AW+S PA+GKH FDGR LHAAPA+L
Sbjct: 58 VDEDGRLVFDGGHVDYSFRSFPAAFPSFCTDATSSS-VLSTLLHDCRVASTARAQAKAGGDYSEGETFFITADTKPKVQLEALALSIFWAHTSQATYTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAEL 254
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: K8YUU4_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YUU4_NANGC) HSP 1 Score: 185 bits (469), Expect = 2.450e-52 Identity = 103/200 (51.50%), Postives = 136/200 (68.00%), Query Frame = 1
Query: 7 LDPEGRVPF-AGTVSFDFRSAPNAL----AEALSPPRVLAQVVKDCQTVFSARAKKL---EYSTGETFWIQADAAPRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEASGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADL 582
+D +GR+ F G V + FRS P A +A S VL+ ++ DC+ +ARA+ +YS GETF+I AD P+ LE LAL IF AHT+ A + + SGAEWW QV+E+EDDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ G+ +SG + AW+S PA+GKH FDGR LHAAPA+L
Sbjct: 80 VDEDGRLVFDGGHVDYSFRSFPAAFPSFCTDATSSS-VLSTLLHDCRVASTARAQAKAGGDYSEGETFFITADTKPKVQLEALALSIFWAHTSQATYTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAEL 276
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A7S4JEC4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JEC4_GUITH) HSP 1 Score: 172 bits (436), Expect = 2.070e-49 Identity = 97/206 (47.09%), Postives = 125/206 (60.68%), Query Frame = 1
Query: 7 LDPEGRVPFA--------GTVSFDFRSAPNALAEALSPPRVLAQVVKDCQTVFSARAKKL--EYSTGETFWIQADAAPRNCLERLALDIFEAHTAG----ARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEA-SGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPAD 579
LD GRVP +++DFR+ P L S + Q+V+ CQ F+AR + +YSTGETFWI +D PR LE+LA +FE HT G + SGAEWWT E DD+G HWD+DY +E+ SGI VHP L+TVTYL+ GGPT+V +K PM G + + GE A+ +SRP+ GKH+ FDGR LH APAD
Sbjct: 9 LDEFGRVPGGILPSNPCYPDLNYDFRNFPKFLDS--SKEKEFNQLVQSCQLAFNARNTRSGQQYSTGETFWIASDTEPRMPLEKLAKAVFEFHTQGLEPGVHYEPSKSGAEWWTLAFEPGDDVGLHWDRDYELESTSGILVHPHLSTVTYLTGVGGPTIVFDKISPMETGPLEEILGEIAEGILSRPSPGKHVSFDGRLLHGAPAD 212
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Match: A0A7S2J122_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2J122_9DINO) HSP 1 Score: 169 bits (429), Expect = 5.620e-49 Identity = 102/205 (49.76%), Postives = 122/205 (59.51%), Query Frame = 1
Query: 7 LDPEGRVPFAGTVS---FDFRSAPNALAEALSPPRVLAQ------VVKDCQTVFSAR-AKKLE-YSTGETFWIQADAA-PRNCLERLALDIFEAHTAGARFNQETSGAEWWTQVIEDEDDIGWHWDKDYGMEA-SGINVHPCLATVTYLSANGGPTVVLEKKGPMTCGDVGGVSGEAAKAWVSRPALGKHICFDGRYLHAAPADL 582
+D +GRV G + FR+ P L L A + + Q FS R A++ E YS G+TFW+QA A P LERLAL IF H A F+ SGAEWWTQVIE EDDIGWHWD+DYG+E +G +HP LATVTYLSA+G PTVVLE G + + A SRP +GKHI FDGR+LHAAPADL
Sbjct: 8 VDEDGRVALPGCEQPPDYGFRAFPGLLQTLLGVAADAASGAWLDALRAEAQAAFSVREARRGEAYSAGDTFWVQAGAKEPATPLERLALAIFRLHAGSANFDAACSGAEWWTQVIECEDDIGWHWDRDYGLEGDTGFRLHPHLATVTYLSASGAPTVVLEAVEEQQAGVCAPKRLDVSAAHWSRPRVGKHISFDGRWLHAAPADL 212 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13373.2528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13373.2528.1 >prot_E-fasciculatus_F_contig13373.2528.1 ID=prot_E-fasciculatus_F_contig13373.2528.1|Name=mRNA_E-fasciculatus_F_contig13373.2528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=204bp FFLDPEGRVPFAGTVSFDFRSAPNALAEALSPPRVLAQVVKDCQTVFSARback to top mRNA from alignment at E-fasciculatus_F_contig13373:16..3580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13373.2528.1 ID=mRNA_E-fasciculatus_F_contig13373.2528.1|Name=mRNA_E-fasciculatus_F_contig13373.2528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3565bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13373:16..3580+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13373:16..3580+ >mRNA_E-fasciculatus_F_contig13373.2528.1 ID=mRNA_E-fasciculatus_F_contig13373.2528.1|Name=mRNA_E-fasciculatus_F_contig13373.2528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1224bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13373:16..3580+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |