mRNA_E-fasciculatus_F_contig13372.2527.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: D8LK44_ECTSI (ABC transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK44_ECTSI) HSP 1 Score: 263 bits (672), Expect = 5.370e-84 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1
Query: 1 LRIGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLASS 402
LRIGLLDWGQTKELGR+DREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLA S
Sbjct: 366 LRIGLLDWGQTKELGRQDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLACS 499
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A835Z9N8_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N8_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.220e-50 Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 1
Query: 1 LRIGLLDWGQTKELGRKDREKVANLILAVSS-HASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHA 381
LR+GLLDWGQ KEL R + A L++A+S +IV F GLG+ L NPDD+DSIEKLALVMFDT+ I GL+FNPFS+ NVLKLNSV +YPQDLYF+LR LMFRGMAQSL VEFSLAD W PHA
Sbjct: 351 LRVGLLDWGQVKELDVDSRTRFARLVIAISDGKGREEIVEAFKGLGIVLENPDDSDSIEKLALVMFDTKPIAGLNFNPFSEGNVLKLNSVKQYPQDLYFVLRAALMFRGMAQSLKVEFSLADIWEPHA 478
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: H6WB89_VAULI (ABC transporter-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB89_VAULI) HSP 1 Score: 160 bits (405), Expect = 1.440e-43 Identity = 75/136 (55.15%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 1 LRIGLLDWGQTKELGRKDREKVANLILAVSSHASPD-IVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLASSE 405
L +GLLDWGQ KEL RE+ A L+ A+++ S D +V F GLG+K+++P+++DSIEKLALVMFD R I G + NPFS +N++K N + +YPQDLYF+LR +MFRGM++SL V FSLA+ WAP+A + L S E
Sbjct: 501 LSVGLLDWGQVKELDEGSRERFARLVCAIANKKSQDEVVEAFKGLGIKIADPNNSDSIEKLALVMFDARNIDGANLNPFSQDNIMKQNRIKQYPQDLYFVLRAAIMFRGMSESLKVPFSLANAWAPYATKFLKSQE 636
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A7S4DCV0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCV0_HETAK) HSP 1 Score: 131 bits (329), Expect = 4.850e-33 Identity = 66/135 (48.89%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 4 RIGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLD-FNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLASSE 405
RIGLLDWGQTK + + K+A ILA+ A ++VR F LG ++ NP D SI K+ MFDTR I G D NPF++ ++LKLN V + P+D+YF+LR + MFRG++ +GV FSLA+ WAP+AR ++A+ +
Sbjct: 420 RIGLLDWGQTKVIEPGLQYKIAQTILAMRGGADAEVVRWFFALGFEVQNPGDHASIVKMVRGMFDTREILGKDDLNPFAEASLLKLNPVTQIPEDIYFVLRAIQMFRGLSTKVGVRFSLAEAWAPYAREVVAAHD 554
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A836CNM3_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNM3_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.800e-31 Identity = 61/134 (45.52%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 LRIGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLASS 402
++IGLLDWGQ K + R + ++A L+ A + I + F GLGVK+SNP+D+ S+ +LAL MF++R +KG+ F+PFS +N L N V +P +L+F+LR+V M RG+A +GV+FS+A W H LL S+
Sbjct: 299 MKIGLLDWGQVKSVDRALQVQLARLMRAFLADDPHQIAQEFLGLGVKVSNPEDSTSLRQLALSMFESRDVKGMVFSPFSPDNALASNQVTAFPPELFFVLRSVQMLRGLAHGMGVDFSVAQAWEKHIGNLLDSN 432
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A7S4D6K6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6K6_HETAK) HSP 1 Score: 122 bits (307), Expect = 8.260e-31 Identity = 61/134 (45.52%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 1 LRIGLLDWGQTKELGRKDREKVANLILAVSSHASP-DIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLAS 399
L +GLLDWGQTKELG + ++A+L+ A+S + DIV+ F +G+KL NP+D S +A+ MFDTR I G NPF N L+ N+V +P DL+F+LR++ + +G++ L V+F L+ WAP+A + LAS
Sbjct: 227 LAVGLLDWGQTKELGEEATARLAHLVKALSQKENKEDIVQRFYDMGMKLENPNDTTSAHAIAVTMFDTRRIPGFVTNPFDSRNALRSNAVKVFPPDLFFMLRSIQIIKGISHGLDVDFHLSRIWAPYADQYLAS 360
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A6U1M370_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M370_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.760e-30 Identity = 51/109 (46.79%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 67 ANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLL 393
A +I A+ H IV CF+ LG ++ NP+D ++IEK+ L MFDT+ K ++ NPFS+++++ N V P D+YFILR V MFRG+A +GV+FS+AD W P+A ++L
Sbjct: 1 AKIIHAIKVHDHVKIVECFHNLGFEVLNPEDTENIEKMVLAMFDTQGTKEININPFSEDSLINANPVTNIPSDMYFILRAVQMFRGLASKVGVDFSIADAWGPYADKVL 109
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A482RSK2_9ARCH (AarF/ABC1/UbiB kinase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSK2_9ARCH) HSP 1 Score: 117 bits (292), Expect = 4.210e-28 Identity = 61/131 (46.56%), Postives = 82/131 (62.60%), Query Frame = 1
Query: 7 IGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVE-FSLADKWAPHARRLLA 396
IGLLDWGQ K L + + A LI+A+ S IV+ F L VK+S P D ++E +A+ MFDTRT + NPF +K NSVL P ++YFI+R V + RGM + ++ +SLADKW HARR+LA
Sbjct: 369 IGLLDWGQVKSLSSQIARQYAQLIVALHSRDQQQIVQAFFDLEVKVSKPYDLRTVEAIAVTMFDTRTHENFVMNPFDPQAAIKQNSVLSMPTEIYFIVRAVQLMRGMCSAFKLQDYSLADKWVVHARRVLA 499
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A0G4F3L2_VITBC (Protein kinase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F3L2_VITBC) HSP 1 Score: 114 bits (285), Expect = 7.330e-27 Identity = 52/129 (40.31%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 7 IGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLL 393
+GLLDWGQ K L + + ++A+ +L + S I + LG+ + +P + ++E++A+ MFDTR + G+ FN FS + LK N+VL +PQDL+F+LR+ + RG++ L ++ +L D+WAPHA+R L
Sbjct: 399 LGLLDWGQVKALDQPLQRRLASFVLDLKSRQRDRIAQGLLDLGIHVEDPSNNATLERMAVSMFDTRKMPGVCFNIFSPDYTLKSNAVLGFPQDLFFVLRSCQLLRGLSTGLSIDLALCDRWAPHAKRFL 527
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Match: A0A1Y1HSN1_KLENI (Protein kinase superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSN1_KLENI) HSP 1 Score: 108 bits (270), Expect = 7.570e-25 Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 4 RIGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLD-FNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLA 396
++GLLD+GQTK L + R + A L+LA++ I F LG++ P D S +A +MFDTR K + NPF+D + ++ N V E+P+DL+F+LRTV + RG+ +G+++S+A+ W P A +LA
Sbjct: 448 KVGLLDYGQTKRLPERLRLQYARLVLALNERDELAITDAFRALGIRTEKPPDVHSFSNMAGLMFDTRMPKDRESLNPFTDESEIQKNPVTEFPKDLFFVLRTVQLLRGLTMGMGIDWSVAEAWKPLADEVLA 579 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13372.2527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13372.2527.1 >prot_E-fasciculatus_F_contig13372.2527.1 ID=prot_E-fasciculatus_F_contig13372.2527.1|Name=mRNA_E-fasciculatus_F_contig13372.2527.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=136bp LRIGLLDWGQTKELGRKDREKVANLILAVSSHASPDIVRCFNGLGVKLSNback to top mRNA from alignment at E-fasciculatus_F_contig13372:1947..3233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13372.2527.1 ID=mRNA_E-fasciculatus_F_contig13372.2527.1|Name=mRNA_E-fasciculatus_F_contig13372.2527.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1287bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13372:1947..3233- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13372:1947..3233- >mRNA_E-fasciculatus_F_contig13372.2527.1 ID=mRNA_E-fasciculatus_F_contig13372.2527.1|Name=mRNA_E-fasciculatus_F_contig13372.2527.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=816bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13372:1947..3233- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |