mRNA_E-fasciculatus_F_contig13355.2517.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 165 bits (418), Expect = 1.420e-44 Identity = 85/111 (76.58%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEARNRVAGSGQPGAGGISGQQLEPRSSGH 435
LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP VCAPVREVIAKSHQRQMVTQEARNRVAGSGQPGAGG+SGQQL P SSGH
Sbjct: 107 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP------------------DLKCAVCAPVREVIAKSHQRQMVTQEARNRVAGSGQPGAGGVSGQQLVPGSSGH 199
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 165 bits (417), Expect = 1.980e-44 Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEARNRVAGSGQPGAGGISGQQLEPRSSGH 435
LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQ ARNRVAGSGQPGAGG+SGQQL P SSGH
Sbjct: 900 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQ-ARNRVAGSGQPGAGGVSGQQLVPGSSGH 1009
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A6U3SN67_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SN67_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.180e-17 Identity = 63/99 (63.64%), Postives = 71/99 (71.72%), Query Frame = 1
Query: 52 PEDRXXXXXXXXXXXXXLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQ 348
P DR LRHA+KCP + QC VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q Q
Sbjct: 61 PSDRQQVLRHQQQRLLLLRHAAKCPHQDNQCPVTPHCAGMKRLWKHIAECKDQKCMVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQ 159
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A7S4ILK3_9STRA (Histone acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILK3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.910e-17 Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEARNRVAGSG 378
LRHASKCP E +CKVTP+C +MKRLW+HI++C++QQCP+ XXXXXXXXXXXXXXXXXXXX CAPVR+ I KS +R+ Q A + G G
Sbjct: 170 LRHASKCPYEDGKCKVTPYCASMKRLWRHISDCRDQQCPVQHXXXXXXXXXXXXXXXXXXXXACAPVRDTIRKSQKREEERQRAHAQQRGQG 261
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A7S4MNF2_9STRA (Histone acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNF2_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.110e-17 Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEARNRVAGSG 378
LRHASKCP E +CKVTP+C +MKRLW+HI++C++QQCP+ XXXXXXXXXXXXXXXXXXXX CAPVR+ I KS +R+ Q A + G G
Sbjct: 170 LRHASKCPYEDGKCKVTPYCASMKRLWRHISDCRDQQCPVQHXXXXXXXXXXXXXXXXXXXXACAPVRDTIRKSQKREEERQRAHAQQRGQG 261
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A7S2UKV4_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKV4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.340e-17 Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEARNR 363
LRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q Q + R
Sbjct: 401 LRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQALKQR 487
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A7S2UIC4_9STRA (Histone acetyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIC4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.710e-17 Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEARNR 363
LRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q Q + R
Sbjct: 401 LRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQALKQR 487
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A7S2R3Z8_9STRA (Histone acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.420e-16 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQEAR 357
LRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q Q+ +
Sbjct: 62 LRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQIQKQK 146
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: K0QZC1_THAOC (Histone acetyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZC1_THAOC) HSP 1 Score: 85.1 bits (209), Expect = 1.480e-16 Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQ 348
LRHA+KCP + QC VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q Q
Sbjct: 291 LRHAAKCPHQDGQCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQ 372
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Match: A0A7S4WAS7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WAS7_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.150e-16 Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 103 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQ 336
LRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q
Sbjct: 275 LRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQ 352 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13355.2517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13355.2517.1 >prot_E-fasciculatus_F_contig13355.2517.1 ID=prot_E-fasciculatus_F_contig13355.2517.1|Name=mRNA_E-fasciculatus_F_contig13355.2517.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=145bp GSSGRGGQQRRRNAEFTPEDRKAALRQQQQRLLLLRHASKCPAEGEQCKVback to top mRNA from alignment at E-fasciculatus_F_contig13355:491..2631+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13355.2517.1 ID=mRNA_E-fasciculatus_F_contig13355.2517.1|Name=mRNA_E-fasciculatus_F_contig13355.2517.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2141bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13355:491..2631+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13355:491..2631+ >mRNA_E-fasciculatus_F_contig13355.2517.1 ID=mRNA_E-fasciculatus_F_contig13355.2517.1|Name=mRNA_E-fasciculatus_F_contig13355.2517.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=870bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13355:491..2631+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |