mRNA_E-fasciculatus_F_contig13348.2512.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13348.2512.1
Unique NamemRNA_E-fasciculatus_F_contig13348.2512.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: D7FNG2_ECTSI (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG2_ECTSI)

HSP 1 Score: 522 bits (1344), Expect = 1.810e-182
Identity = 298/329 (90.58%), Postives = 307/329 (93.31%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLAPGLRARDFHERAAAEAAV--------GEESGETH 963
            V+ DECTPFHVDKDYT+SSMHRTHRWAMRSLREFIDGDDG+QALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVS TMANVRRDRPVHLLGIGGIADIFHGVRQG+DTFDCVHPTRLGRHGGALVKASFWTREQELEEERA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GD R KRHP+VPREHVNLLKGRYREDHRVIDE+CGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRL EEE+KWLAPGLRARDFH+RAAAEAA         GEESGE+H
Sbjct:  172 VVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSHTMANVRRDRPVHLLGIGGIADIFHGVRQGVDTFDCVHPTRLGRHGGALVKASFWTREQELEEERANQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---GDVRKKRHPVVPREHVNLLKGRYREDHRVIDEDCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLAEEEDKWLAPGLRARDFHKRAAAEAAAAEAVKAAAGEESGESH 497          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A836CCU6_9STRA (tRNA-guanine(15) transglycosylase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU6_9STRA)

HSP 1 Score: 306 bits (783), Expect = 8.000e-97
Identity = 188/308 (61.04%), Postives = 225/308 (73.05%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFI-DGDDGSQ--ALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQ-ELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGR-LDEEEEKWLAPGLRARDF 909
            ++ DECTPFHVDK+YT +S  R+HRWA+RSL EF+   ++G+Q  ALYGIIQGGVY DLR E+  FVN  PFFGIAVGGSLGA  A M++VV  TMA VRRDRPVHLLGIGG+ADIF+GV  GI TFDCVHPTRLGRHGGALV+   W +    L  + +        XXXXXXXXXXXXXXXXXXXXXXXXXX      RGGG+ +      VPR  + L KG++R D R +D  CGCPTC  GY+RAY++H  RAGEL+GG L++QHNV+ MN LM  +R AIA G  L++ E+ WLAPGLR+ D 
Sbjct:  202 LVLDECTPFHVDKEYTAASTRRSHRWALRSLNEFVRTANEGAQQQALYGIIQGGVYRDLRAESAAFVNAQPFFGIAVGGSLGASAADMYRVVDMTMAMVRRDRPVHLLGIGGVADIFNGVSHGIGTFDCVHPTRLGRHGGALVRVRHWPKSACSLAVQSSPPVHTNPRXXXXXXXXXXXXXXXXXXXXXXXXXXS-----RGGGEGQ------VPRASIQLAKGQFRGDARPVDAECGCPTCAAGYSRAYLHHCVRAGELVGGALLTQHNVWTMNALMADVRAAIAAGTPLEQVEDHWLAPGLRSADI 498          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A0G4EBX0_VITBC (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EBX0_VITBC)

HSP 1 Score: 300 bits (769), Expect = 2.540e-96
Identity = 157/301 (52.16%), Postives = 189/301 (62.79%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGD-DGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLAPGLRA 900
            ++ DECTPF+V+K YT+SSM R+HRW +RSL+EF   D    QALYGI+QGG  P LR+E+  FVN  PFFG A+GGSLGAD+ATMH VV+ T  ++RRDRP+HLLGIGG+ DIFHGVR GIDTFDCVHPTRLGRHGGALV+  FW  +                                               G GGG    K      +EH+NL K  ++ D R ID +CGC TCR  ++RAY++HL +AGE LGG LVS HNVFFMN LM  IR+AI  G LDEE  KW+ P L A
Sbjct:  185 LVLDECTPFNVEKSYTESSMRRSHRWGLRSLQEFSRLDCQQRQALYGIVQGGTCPSLRDESTHFVNTTPFFGSAIGGSLGADRATMHSVVALTAKSLRRDRPIHLLGIGGVRDIFHGVRHGIDTFDCVHPTRLGRHGGALVRRDFWDTD-----------------------------------------------GSGGGSRSDK-----VKEHINLKKSPFKRDSRPIDASCGCYTCR-NFSRAYLHHLLKAGEQLGGTLVSLHNVFFMNRLMRDIRSAIRSGTLDEERSKWVHPALDA 432          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A0G4I7T1_9ALVE (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I7T1_9ALVE)

HSP 1 Score: 295 bits (756), Expect = 4.490e-93
Identity = 151/305 (49.51%), Postives = 190/305 (62.30%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDG-------SQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLAPGL 894
            ++ DECTPF V K+YT+ +M R+HRWA RSL EF++G +        +QALYGI+QGGVYP LR E+ EF N+ PFFG+A+GGSLGADK  M + V+ T   +RRDRP+HLLG+GG+ DIFHGV  GIDTFDCVHPTRLGRHGGALVK  FW  E+ L                                                  ++ K   +   EH N+ KG ++ D R ID  CGC TCR  Y+RAY++H  ++GEL+GG LV+QHNV+FMNELM SIR AI E RL+EE+ KW+ P L
Sbjct:  269 LVLDECTPFRVTKEYTEGAMKRSHRWAFRSLSEFVNGQEERRRSGRPTQALYGIVQGGVYPSLRKESCEFNNEHPFFGVAIGGSLGADKRMMRKTVAVTCRMLRRDRPIHLLGVGGVRDIFHGVANGIDTFDCVHPTRLGRHGGALVKRKFW--EEGLPPT-----------------------------------------------SKGKDSVMKVGEHFNVAKGLFKHDDRPIDSECGCATCR-NYSRAYLHHCFKSGELVGGSLVAQHNVYFMNELMASIRAAIRENRLEEEKAKWVHPDL 523          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A7S3UNN8_HETAK (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNN8_HETAK)

HSP 1 Score: 289 bits (740), Expect = 5.070e-91
Identity = 146/307 (47.56%), Postives = 185/307 (60.26%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLAPGLRARDFHERA 921
            V+ DECT +H+ KD T  SM  +HRWA+RSL EFI GDDGSQALYGIIQGGVY DLR E+ EF+N  PFFG A+GGSLG    TMH +V  T   VR DRP+HLLGIGGI D+F+GV +GIDTFDCVHPTRLGRHGGALV A++W  +                                                                EHVN+++  ++ED R +D +C CPTC+  Y+RAY+NH  +AGE LGG+L+SQHNV FMN++M  IR +I +G+LDE +E ++   L  ++  E A
Sbjct:  233 VVLDECTAYHIGKDGTAESMRMSHRWALRSLAEFIRGDDGSQALYGIIQGGVYDDLRVESAEFINSQPFFGTAIGGSLGDSSRTMHDIVKFTAGLVREDRPIHLLGIGGIKDVFNGVSEGIDTFDCVHPTRLGRHGGALVAAAWWRADHAPRPTPQQIIKNNGFP-----------------------------------------------EHVNVVRAHFKEDPRPLDPDCSCPTCQ-NYSRAYLNHCLKAGESLGGLLISQHNVHFMNKMMERIRESIPQGKLDEVKESYVGKALEIQEMIETA 491          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A7S1IB19_9EUGL (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IB19_9EUGL)

HSP 1 Score: 286 bits (731), Expect = 1.180e-87
Identity = 148/298 (49.66%), Postives = 185/298 (62.08%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLAPGL 894
            ++ DECTPF+VDK+YT +S  R+HRWA+RSL EFI  DDG+QALYGIIQGGVY DLR E+++F N  PFFG A+GGSLGA K+ MH +V+ T    R+DRP+HLLGIGG+ DIF+GVR GIDTFDCVHPTRL RHGGALVKA +W  E    E                                                AR K       E ++L    +R D R ID+ CGC TC+  +TR Y++HL +AGE L G L++ HNV++MN LM+SIR AI +G LDEEE  W+ P +
Sbjct:  433 LVLDECTPFNVDKEYTAASTRRSHRWAVRSLDEFIRTDDGTQALYGIIQGGVYDDLRRESIDFTNSQPFFGTAIGGSLGATKSMMHDIVTYTALRCRQDRPIHLLGIGGVRDIFNGVRAGIDTFDCVHPTRLARHGGALVKAKYWDEEAPGME-----------------------------------------------GARKK-------ECISLKNASFRRDTRPIDKTCGCYTCQ-NFTRGYLHHLIKAGESLVGTLLTVHNVYYMNSLMSSIRLAIQKGTLDEEETVWVHPDI 675          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A7W1M9H2_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7W1M9H2_9PROT)

HSP 1 Score: 271 bits (694), Expect = 1.750e-85
Identity = 144/294 (48.98%), Postives = 182/294 (61.90%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWL 882
            V+ DECTPFHVDK YT+ SMH +HRWA RSLREF    +G QALYGI QGGVYPDLR ++ +FVN  PFFG AVGGSLGADK  M +VV   M  +  +RPVHLLG+GG++DIF+GV QGIDTFDCVHPTRL RHGGALV A+ W   + L E+                                          RG             REH+NL   R+R D R IDE CGC TC+  ++R+Y++HL +AGEL+    ++ HNV FMN L+T+IR AIA+ +L++ ++ W+
Sbjct:  161 VVLDECTPFHVDKAYTEQSMHLSHRWAERSLREFQSVPEGMQALYGITQGGVYPDLRRQSADFVNSLPFFGHAVGGSLGADKTQMAEVVEMAMEPLDPERPVHLLGVGGVSDIFYGVTQGIDTFDCVHPTRLARHGGALVPANLW---KSLGEDP-----------------------------------------RG-------------REHMNLRNARFRADPRPIDETCGCQTCQ-TFSRSYLHHLLKAGELIVMHALTIHNVHFMNRLLTAIREAIAKDQLEDAKKYWV 396          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A0F5MQ41_9RICK (Queuine tRNA-ribosyltransferase n=1 Tax=Candidatus Arcanobacter lacustris TaxID=1607817 RepID=A0A0F5MQ41_9RICK)

HSP 1 Score: 261 bits (668), Expect = 1.300e-81
Identity = 134/293 (45.73%), Postives = 177/293 (60.41%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKW 879
            V+ DECTPF+V K+YT+ SMH +HRWA+RSL EF + DD SQ+LYGI+QGG+Y DLR ++ +FVN+  FF  AVGGSLGA KA MH +V+ TM+ + +DRPVHLLGIGG++DIF+G++ GIDTFDCVHPTRL RHGGALVK S                                                   S  G             +EH+N+   R++ D   ID  C C TC   Y+R Y++HL +AGE+LG   ++ HNV FMN+LM ++R AI E R++EE++ W
Sbjct:  164 VVLDECTPFNVTKEYTEKSMHMSHRWALRSLAEFKNHDDESQSLYGIVQGGIYDDLRKQSTDFVNENEFFAHAVGGSLGASKAQMHDIVAHTMSMLSKDRPVHLLGIGGVSDIFNGIKYGIDTFDCVHPTRLARHGGALVKVSM--------------------------------------------------SENG-------------KEHINIRNNRFKTDPNPIDSECKCSTCM-RYSRGYLHHLFKAGEILGMQALTIHNVHFMNKLMLAVRGAIREDRVEEEQKIW 392          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A7S3GXI6_9STRA (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXI6_9STRA)

HSP 1 Score: 262 bits (670), Expect = 4.360e-80
Identity = 149/325 (45.85%), Postives = 183/325 (56.31%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTRE------QELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG----------RGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLAPGLRARDFHERAAA 927
            V+ DECTPF+VDK+YT  SM R+HRWA+RSL EF   +  SQALYGIIQGG + DLR+E+  FVN+  FF  A+GGSLG  K TMH++V+ T A +R DRPVHLLGIGG+ DIFHGVRQGIDTFDCV PTRLGRHGGALV A+ W         Q+   E A                                                  +   +A       V  +H+ +     R D R ID  C C TC+  ++RAY++H   AGEL+GG LV+ HNV FMN LM +IR  I  G LDE E ++L P L+ R     AAA
Sbjct:  214 VVFDECTPFNVDKNYTADSMRRSHRWALRSLEEFKRTNTHSQALYGIIQGGTHLDLRDESTAFVNEHDFFASAIGGSLGDSKRTMHEIVTYTRARLRDDRPVHLLGIGGVVDIFHGVRQGIDTFDCVSPTRLGRHGGALVMAAHWEEAVHPLAIQDCTSEAAKLASTKADKLIKRATEREQSRKRLRNLLPMDAPSAEFLQEMKVINDEKERKMAKEAARLAKTRVMSDHIKMKSSLMRSDPRPIDSTCECYTCK-NFSRAYLHHCFSAGELVGGTLVTIHNVHFMNRLMKAIREGIKNGNLDEVEAQFLHPQLKERLLSTPAAA 537          
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Match: A0A848Z7T7_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z7T7_9PROT)

HSP 1 Score: 258 bits (658), Expect = 5.080e-80
Identity = 142/295 (48.14%), Postives = 167/295 (56.61%), Query Frame = 1
Query:    1 VLADECTPFHVDKDYTQSSMHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQGIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGGGDARWKRHPLVPREHVNLLKGRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLDEEEEKWLA 885
            V  DECTPFHV++DYT  SM  +HRW  RSL EF  GDDG+QALYG+IQGGVYPDLR E+ E+    PFFG AVGGSLGA K  M++VVS    ++  DRPVHLLGIGG ADIF GVR GIDTFDCVHPTR+ RHG AL+K                                                        G G+           E +NL   R+R+D   IDE+CGC TC   Y+RAY+NHL RAGE+L   L+S HNV  MN LM  +R AI    LD  E++WLA
Sbjct:  174 VQLDECTPFHVERDYTARSMAMSHRWGDRSLAEFARGDDGAQALYGVIQGGVYPDLRRESTEYTAGRPFFGTAVGGSLGAHKDQMYEVVSYCAPHIHPDRPVHLLGIGGFADIFAGVRLGIDTFDCVHPTRVARHGWALMK--------------------------------------------------------GAGN-----------ERINLRNTRFRDDAGPIDESCGCATCA-TYSRAYLNHLVRAGEVLSATLLSIHNVATMNRLMAEVRAAIGSCTLDAAEKEWLA 400          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13348.2512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG2_ECTSI1.810e-18290.58Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A836CCU6_9STRA8.000e-9761.04tRNA-guanine(15) transglycosylase-like protein n=1... [more]
A0A0G4EBX0_VITBC2.540e-9652.16Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A0G4I7T1_9ALVE4.490e-9349.51Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A7S3UNN8_HETAK5.070e-9147.56Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A7S1IB19_9EUGL1.180e-8749.66Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A7W1M9H2_9PROT1.750e-8548.98Queuine tRNA-ribosyltransferase n=1 Tax=Alphaprote... [more]
A0A0F5MQ41_9RICK1.300e-8145.73Queuine tRNA-ribosyltransferase n=1 Tax=Candidatus... [more]
A0A7S3GXI6_9STRA4.360e-8045.85Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A848Z7T7_9PROT5.080e-8048.14Queuine tRNA-ribosyltransferase n=1 Tax=Inquilinus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13348contigE-fasciculatus_F_contig13348:629..3598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.7
Seed ortholog evalue4.8e-136
Seed eggNOG ortholog2880.D7FNG2
KEGG rclassRC00063
KEGG koko:K00773
KEGG ReactionR03789,R10209
EggNOG free text desc.tRNA-guanine transglycosylation
EggNOG OGsCOG0343@1,KOG3908@2759
EC2.4.2.29
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiontRNA-guanine(15) transglycosylase-like
Ec32 orthologEc-01_005570.1
Exons5
Model size971
Cds size912
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927836.2253354-UTR-E-fasciculatus_F_contig13348:628..6851622927836.2253354-UTR-E-fasciculatus_F_contig13348:628..685Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13348 629..685 +
1695995716.0708063-UTR-E-fasciculatus_F_contig13348:628..6851695995716.0708063-UTR-E-fasciculatus_F_contig13348:628..685Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13348 629..685 +
1622927836.3209698-UTR-E-fasciculatus_F_contig13348:3596..35981622927836.3209698-UTR-E-fasciculatus_F_contig13348:3596..3598Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13348 3597..3598 +
1695995716.1278934-UTR-E-fasciculatus_F_contig13348:3596..35981695995716.1278934-UTR-E-fasciculatus_F_contig13348:3596..3598Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13348 3597..3598 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927836.2441862-CDS-E-fasciculatus_F_contig13348:685..7571622927836.2441862-CDS-E-fasciculatus_F_contig13348:685..757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 686..757 +
1695995716.0828097-CDS-E-fasciculatus_F_contig13348:685..7571695995716.0828097-CDS-E-fasciculatus_F_contig13348:685..757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 686..757 +
1622927836.2562044-CDS-E-fasciculatus_F_contig13348:1219..13361622927836.2562044-CDS-E-fasciculatus_F_contig13348:1219..1336Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 1220..1336 +
1695995716.0947862-CDS-E-fasciculatus_F_contig13348:1219..13361695995716.0947862-CDS-E-fasciculatus_F_contig13348:1219..1336Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 1220..1336 +
1622927836.2684197-CDS-E-fasciculatus_F_contig13348:1772..18741622927836.2684197-CDS-E-fasciculatus_F_contig13348:1772..1874Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 1773..1874 +
1695995716.1030605-CDS-E-fasciculatus_F_contig13348:1772..18741695995716.1030605-CDS-E-fasciculatus_F_contig13348:1772..1874Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 1773..1874 +
1622927836.2827291-CDS-E-fasciculatus_F_contig13348:2599..29731622927836.2827291-CDS-E-fasciculatus_F_contig13348:2599..2973Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 2600..2973 +
1695995716.1111803-CDS-E-fasciculatus_F_contig13348:2599..29731695995716.1111803-CDS-E-fasciculatus_F_contig13348:2599..2973Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 2600..2973 +
1622927836.296152-CDS-E-fasciculatus_F_contig13348:3349..35961622927836.296152-CDS-E-fasciculatus_F_contig13348:3349..3596Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 3350..3596 +
1695995716.1189463-CDS-E-fasciculatus_F_contig13348:3349..35961695995716.1189463-CDS-E-fasciculatus_F_contig13348:3349..3596Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13348 3350..3596 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13348.2512.1prot_E-fasciculatus_F_contig13348.2512.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13348 686..3596 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13348.2512.1

>prot_E-fasciculatus_F_contig13348.2512.1 ID=prot_E-fasciculatus_F_contig13348.2512.1|Name=mRNA_E-fasciculatus_F_contig13348.2512.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=304bp
MHRTHRWAMRSLREFIDGDDGSQALYGIIQGGVYPDLRNEAVEFVNKAPF
FGIAVGGSLGADKATMHQVVSQTMANVRRDRPVHLLGIGGIADIFHGVRQ
GIDTFDCVHPTRLGRHGGALVKASFWTREQELEEERANQEAAAAAAAAAA
AEEDVSVGGETTVAARGGGGASKRRSGRGGGDARWKRHPLVPREHVNLLK
GRYREDHRVIDENCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFF
MNELMTSIRTAIAEGRLDEEEEKWLAPGLRARDFHERAAAEAAVGEESGE
THD*
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mRNA from alignment at E-fasciculatus_F_contig13348:629..3598+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13348.2512.1 ID=mRNA_E-fasciculatus_F_contig13348.2512.1|Name=mRNA_E-fasciculatus_F_contig13348.2512.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2970bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13348:629..3598+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTCTGGCAGACGAGTGCACACCGTTCCACGTGGACAAGGACTACACGCA GTCCTCCATGCACCGCACGCACCGGTGGGCGATGCGCAGCCTCAGGGAGT TCATCGACGGGGACGATGGCTCTCAAGCGGTGTGTGCATGCCTGCAAGTT TGTGGTTGTTTTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG AGAGAGGGAGGAATTGAATGAACAACATATCTAGGTGGGGGCGAGTGGCT GCATGTGGGATGGCACGAAGCGGCGGAAGGGATGGGAAGCTAGAAGGCAC GACCCATCCCAACAGCTTGCCTAGCGCGGAGTGTCGCATAACCACCACGT GCAACAGTCATTTTTTGTGCATCTTGCAGAGCTTTCTTCCTCGTGCATCA GGAAATACAGAAGAAACAGACGGCAACGGTAGCACCTACCCCCCCTCCCC ACATTGCCGGTGGACAGTCCTCGTCTGCTTCCCTCCGACTCTTTCGCCTG CAATCGCACGGGTGGTATCTGTTCGATGGTGTTGAATGTTGAATGTCCTG CCGTGCGTTGTTGACGTCACGCGTTGTCACCGTTTGCGCAGCTGTACGGC ATCATCCAGGGGGGCGTGTACCCGGACCTGAGGAACGAGGCGGTGGAGTT CGTGAACAAGGCGCCCTTCTTCGGAATCGCCGTCGGGGGGAGTCTTGGAG CTGACAAGGTAAGTGTTAGTAGTCTAGGTGTGGGTGTGAGGGCACGTGGG CGTAATGGGTCGTGGATCGTTGGCTCTTCCGTCTCTCTCTCCGTCTCTGT CTCTTTCTCTCTGTCTCTTTCTCTCGTGCCCGCGAAACGGCTTGGGTCTT CTCAATGCCCTTGCCGTGTTTAGTGCTAGCACTGCCTATTGTCGAAAATG TCATCGGCCTGTGTGAGTCGTGCCAAAATCACGTCGCGATGTGGTGAGAA AACGTACTTGTGTGTACCTTGGTCTAGGCATTTCGCTACCCTCTCCACTC GGTGGCATACATGTACATACCCTTTTGTTCCTTCCCCTTCCGCGTCTTCC CTATTTTGCTTCATCGCGCTCTTTCCTCCCTACGCCCGCCCAAGGCATGC ACACCAAGAGGACTTACCCCCTCCCCCCCCTCCTCGACTGTCAGGCGACG ATGCACCAAGTGGTTTCTCAGACGATGGCGAACGTGCGACGCGACCGTCC GGTTCACCTGTTGGGGATTGGCGGAATCGCAGATATCTTCCACGGGGTGA GCGTTACGGGCAGTAGTGTATCATACATACACTTGCGGCTTTTGTTGGAG TGTTTTTTTTTTCTATGAGACGACAAACAGCGACTAGCGGCACAACACAG AAGAAACGGCAGCATTTCGGCTTGTCCCGCGACGTGGAGTGGGGCGCGCG ACAGCGCGTTTGTGTTTTTTTTAGACTCTGGGCAGCATATAGCGCAAAGG CTGGCAAGTCAGGGACACGCTTGACTGGAATTCACGTCTTTCGTGTCGCC CCCTCCTTGTTGCGGACATTTTGTGCTTTGAGGCCAAAGGTGCCGCCAGA ATGGATCATGCAGCAAGTTGTCGCACGCCTATGTGTTTCGCTGGGGGGGG CGGGGGGGCTCGACGTCGTTCTGTGTTGTTGGCATTGACCCTAATGCGTC TGCAATCTTGTGGCCCCGTGAAAGCCAGGTCCCGCGGGAGGCATGGAGAC ACTCCTCAAGGCCCACGTGCTTGTCCAGGTCTTTACCCCCTTCCCTTCCC CCCTAGCCTTGTTAGAAGCCGCTGAAACTTCATCGCCACCGATCATCGAA CCGTACGAACTCTCGACAAGGAGGTGTGCCTGCCACATGCTATGCCACCA CTCTTTTGTGAATCTCTCTCTCTCACCCTCGCACCACCATCCTGCGGTCC CCCCGCGTGCGGTCTCGTCTCTCGAAACCGAAACGTGTCTAAAAAATTCG TTCCGACTTCAACGAGGAAAGGTCCGTCAAGGAATAGATACGTTCGACTG CGTGCACCCCACGAGGCTCGGCCGCCACGGCGGCGCGCTAGTCAAGGCTA GCTTCTGGACCCGCGAGCAGGAGCTGGAAGAAGAGCGGGCTAATCAGGAA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGAAGAGGATGTCTCCGT CGGCGGGGAGACGACGGTGGCCGCGCGGGGGGGGGGAGGGGCGAGTAAAA GGAGGAGCGGCAGAGGTGGTGGCGACGCCCGTTGGAAGCGGCACCCGCTT GTGCCCAGGGAGCACGTGAACCTCCTCAAGGGGCGGTACCGGGAAGATCA CCGGGTGATCGACGAGAATTGCGGCTGCCCCACCTGCCGGGGGGGGTGAG TAGTGCGATGGGGACGTCTGTCCTGTGGTGTTGGCGTGTTCAGAACGTTG TTGTTGATGTTGTTGTCGGGGTTTGGAATCGTGCGTTACAGTGCCTAGCT GGGGAGAGGGTGTGCAAGCCAGGTGCTTTTGGTCCTGAAGTCACGCGTGG TTGTTTTCGTGTGTGGGTTTGTTTGTTACGGCATATGGCTGCCGCCACAC AAGATAGTCTGCTCGCTCACGCGCTCTCTCCCTCTCCCTCTCTCCGTTAT GTTATGACGGTTTGGTCCTCTTAACATGACTGCTGTTTCTCGCGCCTCCT AACCCCATCTTTCCCTATCTCAACACCCCTCTTCCCCCCCCCTCAACAAA CGCCTCACGACGAAAACACAGCTACACCCGGGCGTACATCAACCACCTCG GGAGGGCGGGCGAGCTCCTCGGCGGCATGCTGGTCTCCCAGCACAACGTC TTCTTCATGAACGAGCTCATGACGTCGATTCGGACTGCCATCGCCGAGGG CAGGCTGGACGAGGAGGAGGAAAAATGGCTCGCCCCGGGGCTGCGGGCTA GGGATTTCCACGAGAGAGCGGCGGCGGAAGCGGCGGTGGGAGAAGAAAGC GGGGAAACCCATGACTGAGT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13348:629..3598+

>mRNA_E-fasciculatus_F_contig13348.2512.1 ID=mRNA_E-fasciculatus_F_contig13348.2512.1|Name=mRNA_E-fasciculatus_F_contig13348.2512.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1824bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13348:629..3598+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCACCGCACGCACCGGTGGGCGATGCGCAGCCTCAGGGAGTTCATCGA
CGGGGACGATGGCTCTCAAGCGATGCACCGCACGCACCGGTGGGCGATGC
GCAGCCTCAGGGAGTTCATCGACGGGGACGATGGCTCTCAAGCGCTGTAC
GGCATCATCCAGGGGGGCGTGTACCCGGACCTGAGGAACGAGGCGGTGGA
GTTCGTGAACAAGGCGCCCTTCTTCGGAATCGCCGTCGGGGGGAGTCTTG
GAGCTGACAAGCTGTACGGCATCATCCAGGGGGGCGTGTACCCGGACCTG
AGGAACGAGGCGGTGGAGTTCGTGAACAAGGCGCCCTTCTTCGGAATCGC
CGTCGGGGGGAGTCTTGGAGCTGACAAGGCGACGATGCACCAAGTGGTTT
CTCAGACGATGGCGAACGTGCGACGCGACCGTCCGGTTCACCTGTTGGGG
ATTGGCGGAATCGCAGATATCTTCCACGGGGCGACGATGCACCAAGTGGT
TTCTCAGACGATGGCGAACGTGCGACGCGACCGTCCGGTTCACCTGTTGG
GGATTGGCGGAATCGCAGATATCTTCCACGGGGTCCGTCAAGGAATAGAT
ACGTTCGACTGCGTGCACCCCACGAGGCTCGGCCGCCACGGCGGCGCGCT
AGTCAAGGCTAGCTTCTGGACCCGCGAGCAGGAGCTGGAAGAAGAGCGGG
CTAATCAGGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGAAGAG
GATGTCTCCGTCGGCGGGGAGACGACGGTGGCCGCGCGGGGGGGGGGAGG
GGCGAGTAAAAGGAGGAGCGGCAGAGGTGGTGGCGACGCCCGTTGGAAGC
GGCACCCGCTTGTGCCCAGGGAGCACGTGAACCTCCTCAAGGGGCGGTAC
CGGGAAGATCACCGGGTGATCGACGAGAATTGCGGCTGCCCCACCTGCCG
GGGGGGGTCCGTCAAGGAATAGATACGTTCGACTGCGTGCACCCCACGAG
GCTCGGCCGCCACGGCGGCGCGCTAGTCAAGGCTAGCTTCTGGACCCGCG
AGCAGGAGCTGGAAGAAGAGCGGGCTAATCAGGAAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCGGAAGAGGATGTCTCCGTCGGCGGGGAGACGAC
GGTGGCCGCGCGGGGGGGGGGAGGGGCGAGTAAAAGGAGGAGCGGCAGAG
GTGGTGGCGACGCCCGTTGGAAGCGGCACCCGCTTGTGCCCAGGGAGCAC
GTGAACCTCCTCAAGGGGCGGTACCGGGAAGATCACCGGGTGATCGACGA
GAATTGCGGCTGCCCCACCTGCCGGGGGGGCTACACCCGGGCGTACATCA
ACCACCTCGGGAGGGCGGGCGAGCTCCTCGGCGGCATGCTGGTCTCCCAG
CACAACGTCTTCTTCATGAACGAGCTCATGACGTCGATTCGGACTGCCAT
CGCCGAGGGCAGGCTGGACGAGGAGGAGGAAAAATGGCTCGCCCCGGGGC
TGCGGGCTAGGGATTTCCACGAGAGAGCGGCGGCGGAAGCGGCGGTGGGA
GAAGAAAGCGGGGAAACCCATGACTGACTACACCCGGGCGTACATCAACC
ACCTCGGGAGGGCGGGCGAGCTCCTCGGCGGCATGCTGGTCTCCCAGCAC
AACGTCTTCTTCATGAACGAGCTCATGACGTCGATTCGGACTGCCATCGC
CGAGGGCAGGCTGGACGAGGAGGAGGAAAAATGGCTCGCCCCGGGGCTGC
GGGCTAGGGATTTCCACGAGAGAGCGGCGGCGGAAGCGGCGGTGGGAGAA
GAAAGCGGGGAAACCCATGACTGA
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