mRNA_E-fasciculatus_F_contig13345.2508.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: D8LEZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ5_ECTSI) HSP 1 Score: 512 bits (1319), Expect = 4.750e-176 Identity = 256/267 (95.88%), Postives = 261/267 (97.75%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
GQPLDTIKVRMQARPDAFSGTFQCLR+TLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTG+FTTVVVCPSDVIKSKVQVGRSMRKGVA SA A AK LPVLNAT+MTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTY+TVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQT DKPESL RTLQTVVRTKGW+ALFIGLNAALARAFPANAALFLGYEIVRRAL
Sbjct: 32 GQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A836CAY2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY2_9STRA) HSP 1 Score: 249 bits (635), Expect = 6.810e-74 Identity = 134/268 (50.00%), Postives = 173/268 (64.55%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQ-TADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
GQPLDTIKVR+QA P+AFSG QCLR T+++E + SLWKG+TPAL GAV+EN+VAF +N++LK ++P D +A QP+ +G VTG T V +CP DVIK +VQV R G AA+ P NA +M ++RT+G+RG + GL AQ ARD F++ FFG YD +V++ EV Y AGG+AGV GW MP D +KS +Q T P SL + +V G RALF G+ RAFPANAALFLGYE+ +R L
Sbjct: 25 GQPLDTIKVRIQATPEAFSGAMQCLRTTISQEGVASLWKGATPALSGAVVENIVAFAINKELKLLWPPSDRHAAV--QPVAYGAVTGAVTAVALCPFDVIKCRVQVAR----------GTAARRAP--NAVEMAQLMVRTEGMRGFYRGLRAQVARDALFFSMFFGVYDVLVEQAMRRT-SFPREVAYIGAGGLAGVAGWLLSMPFDVLKSRMQVTPHGPRSLSAVARPLVAAGGPRALFAGVTVTCVRAFPANAALFLGYEVAKRNL 277
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A4D9CU68_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU68_9STRA) HSP 1 Score: 240 bits (612), Expect = 2.640e-70 Identity = 137/254 (53.94%), Postives = 166/254 (65.35%), Query Frame = 1
Query: 91 EESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDG-----------SSAPWWQ-----PILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITP-EVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
EE + +LWKGS PAL GAV EN VAF VN+QLKR+ D +G S A + P L GG TGIFT+ +CPSDVIK KVQV R+M K G A ++A +M H+L+TQGV+GLFVGLGAQFARD+PFYA FFGTY+ + KA Y P E Y +AGG+AGV GWAAVMP+D KSIIQT+ P+SL T+ V +T+G AL+ GL A+ RAFPANAALFLGYE+ R L
Sbjct: 52 EEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGNESNQESSKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLK-----TGETA-----MDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKA--YTTMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVAQTRGPMALYSGLGVAVFRAFPANAALFLGYELAREIL 293
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2S5V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V7_9STRA) HSP 1 Score: 218 bits (555), Expect = 6.030e-62 Identity = 118/274 (43.07%), Postives = 159/274 (58.03%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFP----DKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQ---TADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
GQP DT+KVR+QARPD ++G Q KT E + +LWKGS + G ++EN AFGVNEQLKRVFP D DG + +QP + G +TG + +CPS+++K++ Q+ A A L + + + R QG+ GL+ G+ AQ ARD FYA FFG+Y+ +V R + E +F++GG+AG++GW VMP+D KSIIQ A V RT+G LF G AL R+FPANAALFLGYE+ RR L
Sbjct: 33 GQPFDTVKVRLQARPDEYTGMMQTFYKTAEAEGVAALWKGSVAVVTGMIMENAAAFGVNEQLKRVFPQSAQDLDGGAQGLFQPFMLGALTGSLVSFALCPSEIVKTRTQLE---------VANAKTSGLKAPTSMDILKKVWRLQGMAGLYTGIDAQIARDGLFYAVFFGSYEILV-RAFRKHTSLPDEANFFISGGLAGMLGWGFVMPVDVPKSIIQGDWRARPVGDFGGAFSEVFRTRGLSGLFSGSFPALVRSFPANAALFLGYELTRRGL 296
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2URT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URT5_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.150e-55 Identity = 116/278 (41.73%), Postives = 153/278 (55.04%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPD----KDGSSAP-WWQPILFGGVTGIFTTVVVCPSDVIKSKVQV--GRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQ----TADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
GQPLDTIKVRMQ P ++G Q KT+ EE + +LWKG+ P G LEN VAFGVNE LKR FPD K+ P +P L G +TG + +V+ PS+VIK+K QV G S L++ + +++ QGVR LF G AQ RD PFYA FFG Y+ + + E+ +FL+GG+AG+ GW MP D K+ +Q T P ++ + R +G L+ GL L RAFPANAALFLG E+ +RA
Sbjct: 28 GQPLDTIKVRMQTNPHLYTGVIQTFSKTVGEEGVAALWKGAVPTAVGMALENAVAFGVNEALKRAFPDDPAAKNADERPDLLKPFLMGSITGCCSAIVLLPSEVIKAKTQVEIGSS------------------LSSKDILQKMIKKQGVRSLFCGFDAQLMRDAPFYAVFFGGYELSCYLFRTHVPSMPEELNFFLSGGLAGMFGWTVAMPFDVPKTNVQARYDTKVFGSYFPEMIK-IARERGVVGLYSGLGPTLVRAFPANAALFLGVEMGKRAF 286
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2L363_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L363_9STRA) HSP 1 Score: 196 bits (498), Expect = 8.830e-54 Identity = 112/272 (41.18%), Postives = 157/272 (57.72%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK---DGSSAP-WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPE---SLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
GQP DT+KVRMQ P AF + ++ E I +LWKG+ P G V EN +AFGVNE LKR FPD+ D + P +P L G +TG + V+ PS+V+K+K QV V + GA ++ + +++ QG+R LF+G AQ RD+PFYA FFGTY+ + + E+ +FL+GG AG++GWAA MP D K+ +Q + + S L +VR +G AL+ GL +ARAFPANAALFLG E+ ++
Sbjct: 32 GQPFDTVKVRMQTSPAAFPSVLFTSKSIVSNEGIPALWKGAVPTALGMVAENAMAFGVNEALKRTFPDEAKSDPTKRPDLMRPFLMGAITGCCSATVLLPSEVVKAKTQV-------VVGNTGA--------SSADIYKKMMKRQGIRSLFIGFDAQIMRDMPFYAFFFGTYELNCYLFRTFVPSMPEELNFFLSGGFAGMLGWAAAMPFDVPKTNVQASWDSKVVGSYFPELIRIVRERGVLALYTGLIPTIARAFPANAALFLGVEMGKK 288
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S1ZAT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAT6_TRICV) HSP 1 Score: 195 bits (496), Expect = 7.270e-53 Identity = 108/274 (39.42%), Postives = 156/274 (56.93%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKD-GSSAP-----WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQTVV---RTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
GQP DT+KVRMQ PD + G +Q ++KT A E + + WKG+ P G LEN +AFGVNE LKR FPD + G+ P +P L G +TG + V+ PS+V+K+K QV KG +++ + +++ QG++ +F G AQ RD PFYA FFG+YD + K + E+ +F++GG AG++GW A MP D K+ +Q+ + + ++ R +G L+ GL LARAFPANAALFLG E+ +R
Sbjct: 81 GQPFDTVKVRMQTNPDIYGGIYQTIKKT-ASEGVPAFWKGAVPTAMGMALENAMAFGVNEALKRAFPDPNLGAMDPEKPPDLLRPFLMGTITGCCSACVLLPSEVVKAKTQVLVGTGKG--------------MSSNDVFKQMMKKQGIKSIFCGFEAQLMRDGPFYAFFFGSYDMLCYLFKIYVPSMPDELRFFMSGGFAGMLGWTAAMPFDVPKTNVQSRWDTKVVGSYFPELIKIGRERGILGLYNGLGPTLARAFPANAALFLGVEMGKR 339
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: B8C9S7_THAPS (Mitochondrial carrier (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9S7_THAPS) HSP 1 Score: 192 bits (487), Expect = 1.840e-52 Identity = 112/269 (41.64%), Postives = 154/269 (57.25%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESL----PRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
GQP DT+KVRMQ P F + L E + +LWKG+ P G VLEN +AFGVNE LKR FPD P +P L G +TG + V+ PS+++K+K QV + V+AS+ T++ ++R G+R LFVG AQ RD PFYA FFGTY+ + + E+ YFL+GG AG++GW A MP D K+ +Q + + + + P L+ +VR +G AL+ GL +ARAFPANAALFLG E ++
Sbjct: 20 GQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPD-GSKEDPTQRPDL-GAITGCCSATVLLPSEIVKAKTQV---VVGNVSASS------------TEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLR-IVRERGVLALYTGLVPTIARAFPANAALFLGVETGKK 270
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S4T4E9_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4T4E9_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.730e-50 Identity = 105/280 (37.50%), Postives = 153/280 (54.64%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK-----DGSSAP----WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESL----PRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
GQP DT+KVRMQ P+ +S ++ T+ EE I + WKG+ P G EN +AFGVNE LKR FPD D + A +P L G +TG + +V+ PS+V+K+K QV +++ + ++R QG + LF GL AQ RD PFYA FFG+Y+ + + E+ YF++GG+AG++GW A MP D K+ +Q+ + + P+ +Q + + +G L+ GL L RAFPANAALFLG E+ +R
Sbjct: 28 GQPFDTVKVRMQTNPELYSSIYKTATTTMGEEGIKAFWKGAVPTAMGMAAENAMAFGVNEALKRAFPDPNKDQFDHNGAQRRPDLLRPFLMGAITGCCSALVLLPSEVVKAKTQVAVGTD----------------VSSNDIFKKMVRKQGYKSLFCGLDAQLMRDGPFYAFFFGSYEMSCFLFRTYVPSMPEELNYFISGGLAGMLGWTAAMPFDVPKTNVQSRYDTQIVGSYFPQMIQ-ITKERGILGLYNGLGPTLVRAFPANAALFLGVEMGKRCF 290
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2NZN3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZN3_9STRA) HSP 1 Score: 186 bits (471), Expect = 5.560e-50 Identity = 104/273 (38.10%), Postives = 151/273 (55.31%), Query Frame = 1
Query: 1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPD----KDGSSAP-WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQT---VVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
GQPLDT+KVRMQ P +SG + E T+LWKG+ P G EN +AFGVNE LKR FP+ KD + P +P G +TG + +V+ PS+V+K+K+QV A+ ++A + +L+ QG++ +F GL +Q ARD FYA FFG Y+ + + E+ +F++GG+AG+ GWA MP D K+ +Q+ + + L +VR +G L+ GL L RAFPANAALFLG E+ ++
Sbjct: 28 GQPLDTVKVRMQTMPKVYSGIGTSFAHIVRNEGATALWKGAVPTTLGMTAENAMAFGVNEALKRAFPEDKSSKDVNGPPNMIRPFQMGAITGCCSALVLLPSEVVKAKIQV-----------------AVGTVSARDIMKQMLKEQGIKSMFCGLDSQLARDASFYAVFFGGYELSCYLFRTYVPSMPEELNFFISGGLAGMFGWACAMPFDVPKTNVQSRYDTKVVGSYLPEMGRIVRKRGILGLYDGLGPVLIRAFPANAALFLGVEMGKK 283 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13345.2508.1 >prot_E-fasciculatus_F_contig13345.2508.1 ID=prot_E-fasciculatus_F_contig13345.2508.1|Name=mRNA_E-fasciculatus_F_contig13345.2508.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=258bp MQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEback to top mRNA from alignment at E-fasciculatus_F_contig13345:178..2237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13345.2508.1 ID=mRNA_E-fasciculatus_F_contig13345.2508.1|Name=mRNA_E-fasciculatus_F_contig13345.2508.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2060bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13345:178..2237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13345:178..2237+ >mRNA_E-fasciculatus_F_contig13345.2508.1 ID=mRNA_E-fasciculatus_F_contig13345.2508.1|Name=mRNA_E-fasciculatus_F_contig13345.2508.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1548bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13345:178..2237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |