mRNA_E-fasciculatus_F_contig13345.2508.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13345.2508.1
Unique NamemRNA_E-fasciculatus_F_contig13345.2508.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: D8LEZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ5_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 4.750e-176
Identity = 256/267 (95.88%), Postives = 261/267 (97.75%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
            GQPLDTIKVRMQARPDAFSGTFQCLR+TLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTG+FTTVVVCPSDVIKSKVQVGRSMRKGVA SA A AK LPVLNAT+MTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTY+TVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQT DKPESL RTLQTVVRTKGW+ALFIGLNAALARAFPANAALFLGYEIVRRAL
Sbjct:   32 GQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A836CAY2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY2_9STRA)

HSP 1 Score: 249 bits (635), Expect = 6.810e-74
Identity = 134/268 (50.00%), Postives = 173/268 (64.55%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQ-TADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
            GQPLDTIKVR+QA P+AFSG  QCLR T+++E + SLWKG+TPAL GAV+EN+VAF +N++LK ++P  D  +A   QP+ +G VTG  T V +CP DVIK +VQV R          G AA+  P  NA +M   ++RT+G+RG + GL AQ ARD  F++ FFG YD +V++          EV Y  AGG+AGV GW   MP D +KS +Q T   P SL    + +V   G RALF G+     RAFPANAALFLGYE+ +R L
Sbjct:   25 GQPLDTIKVRIQATPEAFSGAMQCLRTTISQEGVASLWKGATPALSGAVVENIVAFAINKELKLLWPPSDRHAAV--QPVAYGAVTGAVTAVALCPFDVIKCRVQVAR----------GTAARRAP--NAVEMAQLMVRTEGMRGFYRGLRAQVARDALFFSMFFGVYDVLVEQAMRRT-SFPREVAYIGAGGLAGVAGWLLSMPFDVLKSRMQVTPHGPRSLSAVARPLVAAGGPRALFAGVTVTCVRAFPANAALFLGYEVAKRNL 277          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A4D9CU68_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU68_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.640e-70
Identity = 137/254 (53.94%), Postives = 166/254 (65.35%), Query Frame = 1
Query:   91 EESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDG-----------SSAPWWQ-----PILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITP-EVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
            EE + +LWKGS PAL GAV EN VAF VN+QLKR+  D +G           S A   +     P L GG TGIFT+  +CPSDVIK KVQV R+M K      G  A     ++A +M  H+L+TQGV+GLFVGLGAQFARD+PFYA FFGTY+  +   KA  Y   P E  Y +AGG+AGV GWAAVMP+D  KSIIQT+  P+SL  T+  V +T+G  AL+ GL  A+ RAFPANAALFLGYE+ R  L
Sbjct:   52 EEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGNESNQESSKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLK-----TGETA-----MDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKA--YTTMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVAQTRGPMALYSGLGVAVFRAFPANAALFLGYELAREIL 293          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2S5V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V7_9STRA)

HSP 1 Score: 218 bits (555), Expect = 6.030e-62
Identity = 118/274 (43.07%), Postives = 159/274 (58.03%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFP----DKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQ---TADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
            GQP DT+KVR+QARPD ++G  Q   KT   E + +LWKGS   + G ++EN  AFGVNEQLKRVFP    D DG +   +QP + G +TG   +  +CPS+++K++ Q+           A A    L    +  +   + R QG+ GL+ G+ AQ ARD  FYA FFG+Y+ +V R       +  E  +F++GG+AG++GW  VMP+D  KSIIQ    A            V RT+G   LF G   AL R+FPANAALFLGYE+ RR L
Sbjct:   33 GQPFDTVKVRLQARPDEYTGMMQTFYKTAEAEGVAALWKGSVAVVTGMIMENAAAFGVNEQLKRVFPQSAQDLDGGAQGLFQPFMLGALTGSLVSFALCPSEIVKTRTQLE---------VANAKTSGLKAPTSMDILKKVWRLQGMAGLYTGIDAQIARDGLFYAVFFGSYEILV-RAFRKHTSLPDEANFFISGGLAGMLGWGFVMPVDVPKSIIQGDWRARPVGDFGGAFSEVFRTRGLSGLFSGSFPALVRSFPANAALFLGYELTRRGL 296          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2URT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URT5_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.150e-55
Identity = 116/278 (41.73%), Postives = 153/278 (55.04%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPD----KDGSSAP-WWQPILFGGVTGIFTTVVVCPSDVIKSKVQV--GRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQ----TADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
            GQPLDTIKVRMQ  P  ++G  Q   KT+ EE + +LWKG+ P   G  LEN VAFGVNE LKR FPD    K+    P   +P L G +TG  + +V+ PS+VIK+K QV  G S                  L++  +   +++ QGVR LF G  AQ  RD PFYA FFG Y+      +     +  E+ +FL+GG+AG+ GW   MP D  K+ +Q    T       P  ++ + R +G   L+ GL   L RAFPANAALFLG E+ +RA 
Sbjct:   28 GQPLDTIKVRMQTNPHLYTGVIQTFSKTVGEEGVAALWKGAVPTAVGMALENAVAFGVNEALKRAFPDDPAAKNADERPDLLKPFLMGSITGCCSAIVLLPSEVIKAKTQVEIGSS------------------LSSKDILQKMIKKQGVRSLFCGFDAQLMRDAPFYAVFFGGYELSCYLFRTHVPSMPEELNFFLSGGLAGMFGWTVAMPFDVPKTNVQARYDTKVFGSYFPEMIK-IARERGVVGLYSGLGPTLVRAFPANAALFLGVEMGKRAF 286          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2L363_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L363_9STRA)

HSP 1 Score: 196 bits (498), Expect = 8.830e-54
Identity = 112/272 (41.18%), Postives = 157/272 (57.72%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK---DGSSAP-WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPE---SLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
            GQP DT+KVRMQ  P AF       +  ++ E I +LWKG+ P   G V EN +AFGVNE LKR FPD+   D +  P   +P L G +TG  +  V+ PS+V+K+K QV       V  + GA        ++  +   +++ QG+R LF+G  AQ  RD+PFYA FFGTY+      +     +  E+ +FL+GG AG++GWAA MP D  K+ +Q +   +   S    L  +VR +G  AL+ GL   +ARAFPANAALFLG E+ ++
Sbjct:   32 GQPFDTVKVRMQTSPAAFPSVLFTSKSIVSNEGIPALWKGAVPTALGMVAENAMAFGVNEALKRTFPDEAKSDPTKRPDLMRPFLMGAITGCCSATVLLPSEVVKAKTQV-------VVGNTGA--------SSADIYKKMMKRQGIRSLFIGFDAQIMRDMPFYAFFFGTYELNCYLFRTFVPSMPEELNFFLSGGFAGMLGWAAAMPFDVPKTNVQASWDSKVVGSYFPELIRIVRERGVLALYTGLIPTIARAFPANAALFLGVEMGKK 288          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S1ZAT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAT6_TRICV)

HSP 1 Score: 195 bits (496), Expect = 7.270e-53
Identity = 108/274 (39.42%), Postives = 156/274 (56.93%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKD-GSSAP-----WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQTVV---RTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
            GQP DT+KVRMQ  PD + G +Q ++KT A E + + WKG+ P   G  LEN +AFGVNE LKR FPD + G+  P       +P L G +TG  +  V+ PS+V+K+K QV     KG              +++  +   +++ QG++ +F G  AQ  RD PFYA FFG+YD +    K     +  E+ +F++GG AG++GW A MP D  K+ +Q+    + +      ++   R +G   L+ GL   LARAFPANAALFLG E+ +R
Sbjct:   81 GQPFDTVKVRMQTNPDIYGGIYQTIKKT-ASEGVPAFWKGAVPTAMGMALENAMAFGVNEALKRAFPDPNLGAMDPEKPPDLLRPFLMGTITGCCSACVLLPSEVVKAKTQVLVGTGKG--------------MSSNDVFKQMMKKQGIKSIFCGFEAQLMRDGPFYAFFFGSYDMLCYLFKIYVPSMPDELRFFMSGGFAGMLGWTAAMPFDVPKTNVQSRWDTKVVGSYFPELIKIGRERGILGLYNGLGPTLARAFPANAALFLGVEMGKR 339          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: B8C9S7_THAPS (Mitochondrial carrier (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9S7_THAPS)

HSP 1 Score: 192 bits (487), Expect = 1.840e-52
Identity = 112/269 (41.64%), Postives = 154/269 (57.25%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESL----PRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
            GQP DT+KVRMQ  P  F       +  L  E + +LWKG+ P   G VLEN +AFGVNE LKR FPD      P  +P L G +TG  +  V+ PS+++K+K QV   +   V+AS+            T++   ++R  G+R LFVG  AQ  RD PFYA FFGTY+      +     +  E+ YFL+GG AG++GW A MP D  K+ +Q + + + +    P  L+ +VR +G  AL+ GL   +ARAFPANAALFLG E  ++
Sbjct:   20 GQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPD-GSKEDPTQRPDL-GAITGCCSATVLLPSEIVKAKTQV---VVGNVSASS------------TEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLR-IVRERGVLALYTGLVPTIARAFPANAALFLGVETGKK 270          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S4T4E9_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4T4E9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.730e-50
Identity = 105/280 (37.50%), Postives = 153/280 (54.64%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK-----DGSSAP----WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESL----PRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 801
            GQP DT+KVRMQ  P+ +S  ++    T+ EE I + WKG+ P   G   EN +AFGVNE LKR FPD      D + A       +P L G +TG  + +V+ PS+V+K+K QV                     +++  +   ++R QG + LF GL AQ  RD PFYA FFG+Y+      +     +  E+ YF++GG+AG++GW A MP D  K+ +Q+    + +    P+ +Q + + +G   L+ GL   L RAFPANAALFLG E+ +R  
Sbjct:   28 GQPFDTVKVRMQTNPELYSSIYKTATTTMGEEGIKAFWKGAVPTAMGMAAENAMAFGVNEALKRAFPDPNKDQFDHNGAQRRPDLLRPFLMGAITGCCSALVLLPSEVVKAKTQVAVGTD----------------VSSNDIFKKMVRKQGYKSLFCGLDAQLMRDGPFYAFFFGSYEMSCFLFRTYVPSMPEELNYFISGGLAGMLGWTAAMPFDVPKTNVQSRYDTQIVGSYFPQMIQ-ITKERGILGLYNGLGPTLVRAFPANAALFLGVEMGKRCF 290          
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Match: A0A7S2NZN3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZN3_9STRA)

HSP 1 Score: 186 bits (471), Expect = 5.560e-50
Identity = 104/273 (38.10%), Postives = 151/273 (55.31%), Query Frame = 1
Query:    1 GQPLDTIKVRMQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPD----KDGSSAP-WWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSMRKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTADKPESLPRTLQT---VVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 795
            GQPLDT+KVRMQ  P  +SG        +  E  T+LWKG+ P   G   EN +AFGVNE LKR FP+    KD +  P   +P   G +TG  + +V+ PS+V+K+K+QV                 A+  ++A  +   +L+ QG++ +F GL +Q ARD  FYA FFG Y+      +     +  E+ +F++GG+AG+ GWA  MP D  K+ +Q+    + +   L     +VR +G   L+ GL   L RAFPANAALFLG E+ ++
Sbjct:   28 GQPLDTVKVRMQTMPKVYSGIGTSFAHIVRNEGATALWKGAVPTTLGMTAENAMAFGVNEALKRAFPEDKSSKDVNGPPNMIRPFQMGAITGCCSALVLLPSEVVKAKIQV-----------------AVGTVSARDIMKQMLKEQGIKSMFCGLDSQLARDASFYAVFFGGYELSCYLFRTYVPSMPEELNFFISGGLAGMFGWACAMPFDVPKTNVQSRYDTKVVGSYLPEMGRIVRKRGILGLYDGLGPVLIRAFPANAALFLGVEMGKK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13345.2508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ5_ECTSI4.750e-17695.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAY2_9STRA6.810e-7450.00Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9CU68_9STRA2.640e-7053.94Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2S5V7_9STRA6.030e-6243.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2URT5_9STRA2.150e-5541.73Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2L363_9STRA8.830e-5441.18Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1ZAT6_TRICV7.270e-5339.42Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8C9S7_THAPS1.840e-5241.64Mitochondrial carrier (Fragment) n=1 Tax=Thalassio... [more]
A0A7S4T4E9_9STRA1.730e-5037.50Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2NZN3_9STRA5.560e-5038.10Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13345contigE-fasciculatus_F_contig13345:178..2237 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score487.6
Seed ortholog evalue3.5e-135
Seed eggNOG ortholog2880.D8LEZ5
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K15109,ko:K15397
KEGG TC2.A.29.8
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01110,ko04714,map00062,map01110,map04714
KEGG ModuleM00415
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006839,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015179,GO:0015181,GO:0015189,GO:0015238,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089709,GO:0098655,GO:0098656,GO:1901474,GO:1902022,GO:1902475,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990822
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0758@1,KOG0758@2759
EC2.3.1.199
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size2060
Cds size774
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13345.2508.1prot_E-fasciculatus_F_contig13345.2508.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13345 208..981 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927835.998441-UTR-E-fasciculatus_F_contig13345:177..2071622927835.998441-UTR-E-fasciculatus_F_contig13345:177..207Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13345 178..207 +
1695995715.984242-UTR-E-fasciculatus_F_contig13345:177..2071695995715.984242-UTR-E-fasciculatus_F_contig13345:177..207Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13345 178..207 +
1622927836.030524-UTR-E-fasciculatus_F_contig13345:981..22371622927836.030524-UTR-E-fasciculatus_F_contig13345:981..2237Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13345 982..2237 +
1695995716.0205436-UTR-E-fasciculatus_F_contig13345:981..22371695995716.0205436-UTR-E-fasciculatus_F_contig13345:981..2237Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13345 982..2237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927836.0124545-CDS-E-fasciculatus_F_contig13345:207..9811622927836.0124545-CDS-E-fasciculatus_F_contig13345:207..981Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13345 208..981 +
1695995716.0071192-CDS-E-fasciculatus_F_contig13345:207..9811695995716.0071192-CDS-E-fasciculatus_F_contig13345:207..981Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13345 208..981 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13345.2508.1

>prot_E-fasciculatus_F_contig13345.2508.1 ID=prot_E-fasciculatus_F_contig13345.2508.1|Name=mRNA_E-fasciculatus_F_contig13345.2508.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=258bp
MQARPDAFSGTFQCLRKTLAEESITSLWKGSTPALGGAVLENMVAFGVNE
QLKRVFPDKDGSSAPWWQPILFGGVTGIFTTVVVCPSDVIKSKVQVGRSM
RKGVAASAGAAAKALPVLNATQMTAHILRTQGVRGLFVGLGAQFARDVPF
YAAFFGTYDTVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVK
SIIQTADKPESLPRTLQTVVRTKGWRALFIGLNAALARAFPANAALFLGY
EIVRRAL*
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mRNA from alignment at E-fasciculatus_F_contig13345:178..2237+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13345.2508.1 ID=mRNA_E-fasciculatus_F_contig13345.2508.1|Name=mRNA_E-fasciculatus_F_contig13345.2508.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2060bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13345:178..2237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCCAGCCTCTAGACACCATCAAAGTGCGAATGCAAGCTCGCCCGGATGC CTTTAGCGGCACGTTCCAATGCCTGAGAAAGACACTAGCGGAGGAAAGCA TCACGTCGCTGTGGAAGGGGTCAACGCCGGCCCTGGGCGGCGCCGTTCTG GAGAACATGGTAGCCTTCGGGGTGAACGAGCAGCTCAAGCGCGTGTTTCC GGACAAGGACGGGTCCTCAGCCCCGTGGTGGCAGCCGATACTGTTCGGAG GCGTTACAGGCATCTTTACCACCGTGGTTGTCTGCCCCAGCGACGTCATC AAGTCCAAGGTTCAGGTCGGACGGTCAATGCGAAAGGGGGTAGCAGCGTC GGCCGGCGCGGCGGCCAAGGCGCTGCCGGTGCTTAACGCGACACAGATGA CGGCGCATATCTTGCGGACGCAGGGAGTACGAGGCTTGTTCGTCGGGCTG GGTGCCCAATTCGCCAGGGACGTACCGTTCTACGCGGCGTTCTTCGGAAC CTACGACACTGTCGTGGACCGCGGTAAGGCGCTGCCGTACGAGATAACCC CGGAGGTGCTGTATTTCTTGGCGGGTGGCATGGCGGGGGTGGTTGGGTGG GCGGCCGTGATGCCGCTAGACTCGGTCAAGTCCATCATTCAGACGGCGGA CAAGCCCGAGTCTTTGCCCCGGACGTTGCAAACGGTCGTCCGCACGAAGG GGTGGCGAGCGCTCTTCATCGGCTTGAACGCCGCTCTTGCTCGGGCGTTT CCTGCGAACGCGGCTCTCTTCTTGGGATACGAAATCGTGCGAAGGGCGTT GTAGTAATCGAGGGGCGGTCGGTGGTTGTAGCCGACGCCAGCGGGCGGGG CCTTCGTGTGATGTCTTCCCCGGATGCTGCAGCAGGTGGTGCGCAGGGTG TTCTTGCTCCTCAAGAGTTTGTTGTGAGTAGAAGACGGCGTTGTTTGTTT TGTGTTGTCTCCCTCGTGTTTCAGCAGTTCGGTCTAAATTCCTGGTACTA TAAGTAGAACAATAGTTTTCGACCGAAATGTCAAAAGGTCCACGAACTCC CTTGCATCTGCGGTTTGACCGTGAGGTCCTATCCCGTGTAGCGTATGCCG CCTGTTGAAAATTGAAAACCGATCGCACTATCCACGGTGATCCGCATCTC TTGGTGTGTGCGAACAGGTGCGAAGAGAGGATACGTGTTGAACGTTTTAG AGGGATGTTTGAGAGATAATCTGGACGTACGTGTGTGTGTGTCAATGGGC TCCCCGGTGGTGTACTATGTATGTATAGCTTTTCCCTATCCGCACCACGG GACATGTGACGATTTTGCTACCAATTTTGTTTAAAAGACAGCGTGGAGTA GCTAGACTATAGCTAATAGACAGAGGAGGATAGAACGTTGCCGTTAGTCT ACAGGTGGTGCGAGTTCGTGTGAATTGCGGGGTAGACGATGGTGCTGACG TTAATATGATAGGTGATCCAATGATGCATCGGCCCCCGTTGTTTGTTTGC GGTATTCTGGCTCGACGAAAGCCCAAAGGCCTTCAGATCTGAAGGTTTCT AAGCGCATGAATGGAAAACTTGTTGGTGGCGGGAAGATACCTTGGCTCCT TGAGCGCTTGCGCCTCATGACGTGCTCCAAGAGACGCGGGTACAGACAAG GGCGATTTTATCCTGTTACTCAGGGCGAAAGTTGCTCGTTGACAGTTGGC GCTACGTCAAAGTAGGTGAAATGCTTGCCACAAGGAAGAGAAGGCGAGAA AATATGGCGGAATTCGCGCTACTACATGTGTATGGTTGCTCTTCCGCGCT TGCCATCGTACACTTGTTTGGGTCTCAAACGAATGTGTATGCTGGTCCTT GTGCGGATTCGGGACATGGGGCGTCATCGCTTTCGGGATGGCTAATACAT ACTGTACCTGCGCAAGAGGAACGTTGGTTGGAAGACATGGAATCGTGTTG TTGAGTGGTTTTCGCCACATTCATCACTCTCGGCTGGTGTACAATGCTAT GGGTACCTCACAACTCCCGGCGGACCTCCGCATGAGCAACCTGTTGACAT GGCACTCGAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13345:178..2237+

>mRNA_E-fasciculatus_F_contig13345.2508.1 ID=mRNA_E-fasciculatus_F_contig13345.2508.1|Name=mRNA_E-fasciculatus_F_contig13345.2508.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1548bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13345:178..2237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAAGCTCGCCCGGATGCCTTTAGCGGCACGTTCCAATGCCTGAGAAA
GACACTAGCGGAGGAAAGCATCACGTCGCTGTGGAAGGGGTCAACGCCGG
CCCTGGGCGGCGCCGTTCTGGAGAACATGGTAGCCTTCGGGGTGAACGAG
CAGCTCAAGCGCGTGTTTCCGGACAAGGACGGGTCCTCAGCCCCGTGGTG
GCAGCCGATACTGTTCGGAGGCGTTACAGGCATCTTTACCACCGTGGTTG
TCTGCCCCAGCGACGTCATCAAGTCCAAGGTTCAGGTCGGACGGTCAATG
CGAAAGGGGGTAGCAGCGTCGGCCGGCGCGGCGGCCAAGGCGCTGCCGGT
GCTTAACGCGACACAGATGACGGCGCATATCTTGCGGACGCAGGGAGTAC
GAGGCTTGTTCGTCGGGCTGGGTGCCCAATTCGCCAGGGACGTACCGTTC
TACGCGGCGTTCTTCGGAACCTACGACACTGTCGTGGACCGCGGTAAGGC
GCTGCCGTACGAGATAACCCCGGAGGTGCTGTATTTCTTGGCGGGTGGCA
TGGCGGGGGTGGTTGGGTGGGCGGCCGTGATGCCGCTAGACTCGGTCAAG
TCCATCATTCAGACGGCGGACAAGCCCGAGTCTTTGCCCCGGACGTTGCA
AACGGTCGTCCGCACGAAGGGGTGGCGAGCGCTCTTCATCGGCTTGAACG
CCGCTCTTGCTCGGGCGTTTCCTGCGAACGCGGCTCTCTTCTTGGGATAC
GAAATCGTGCGAAGGGCGTTGTAGATGCAAGCTCGCCCGGATGCCTTTAG
CGGCACGTTCCAATGCCTGAGAAAGACACTAGCGGAGGAAAGCATCACGT
CGCTGTGGAAGGGGTCAACGCCGGCCCTGGGCGGCGCCGTTCTGGAGAAC
ATGGTAGCCTTCGGGGTGAACGAGCAGCTCAAGCGCGTGTTTCCGGACAA
GGACGGGTCCTCAGCCCCGTGGTGGCAGCCGATACTGTTCGGAGGCGTTA
CAGGCATCTTTACCACCGTGGTTGTCTGCCCCAGCGACGTCATCAAGTCC
AAGGTTCAGGTCGGACGGTCAATGCGAAAGGGGGTAGCAGCGTCGGCCGG
CGCGGCGGCCAAGGCGCTGCCGGTGCTTAACGCGACACAGATGACGGCGC
ATATCTTGCGGACGCAGGGAGTACGAGGCTTGTTCGTCGGGCTGGGTGCC
CAATTCGCCAGGGACGTACCGTTCTACGCGGCGTTCTTCGGAACCTACGA
CACTGTCGTGGACCGCGGTAAGGCGCTGCCGTACGAGATAACCCCGGAGG
TGCTGTATTTCTTGGCGGGTGGCATGGCGGGGGTGGTTGGGTGGGCGGCC
GTGATGCCGCTAGACTCGGTCAAGTCCATCATTCAGACGGCGGACAAGCC
CGAGTCTTTGCCCCGGACGTTGCAAACGGTCGTCCGCACGAAGGGGTGGC
GAGCGCTCTTCATCGGCTTGAACGCCGCTCTTGCTCGGGCGTTTCCTGCG
AACGCGGCTCTCTTCTTGGGATACGAAATCGTGCGAAGGGCGTTGTAG
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