mRNA_E-fasciculatus_F_contig13342.2507.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: D8LR02_ECTSI (Beta-(1,2)-xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR02_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 2.470e-146 Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 1
Query: 4 YKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKKVVVTWMARRSSVQ 633
YKNSQHEKQAYVGLRRGAVRGTCSP+GASWQEK FPGWNADWTTKSFQPVDQLECDGWVDHPV+VIQRDTFANLFHDSEDFVNAFLAMSILRKRP DVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAW+VGLEYG KVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQG+TSYASPPSKKVVVTWMARRSSVQ
Sbjct: 248 YKNSQHEKQAYVGLRRGAVRGTCSPKGASWQEKFFPGWNADWTTKSFQPVDQLECDGWVDHPVMVIQRDTFANLFHDSEDFVNAFLAMSILRKRPRDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWEVGLEYGELKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGMTSYASPPSKKVVVTWMARRSSVQ 457
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A6H5JCY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY8_9PHAE) HSP 1 Score: 351 bits (901), Expect = 3.070e-118 Identity = 170/193 (88.08%), Postives = 173/193 (89.64%), Query Frame = 1
Query: 112 GWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIR-------------------GLDLQGVTSYASPPSKKVVVTWMARRSSVQ 633
GWNADWTTKSFQPVDQLECDGWVDHPV+VIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGR TLTAWDVGLEYG+GKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIR GLDLQG+TSYASPPSKKVVVTWMARRSSVQ
Sbjct: 3 GWNADWTTKSFQPVDQLECDGWVDHPVMVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRSTLTAWDVGLEYGTGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRLVFCSNNNLVFVSKTVRGRGLDLQGMTSYASPPSKKVVVTWMARRSSVQ 195
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: F0YEW7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW7_AURAN) HSP 1 Score: 241 bits (614), Expect = 2.960e-72 Identity = 119/212 (56.13%), Postives = 148/212 (69.81%), Query Frame = 1
Query: 1 RYKNSQH-EKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPS--KKVVVTWMARRSS 627
RY ++H E +A+V R GA+ C WQ K FPGWNA W +F VD LECD W D P LV++RDTFANLFHDSEDFVNAF+A+++LR D+Q+LLTD+YP GPFW MW +VF RP LTAW +G +YG+ VCF+ + +GI G AAPTT+ T C +++VRAYSDFVIRGL LQG YA+P K VVVT++ARRSS
Sbjct: 314 RYVAARHAEWEAHVSYREGALAADCDADPELWQAKHFPGWNAHWAD-AFARVDDLECDVWEDAPTLVVERDTFANLFHDSEDFVNAFIALAVLRWSTADLQILLTDIYPEGPFWDMWSRVFRGTRPPLTAWQIGQKYGAKNVCFKKVAIGILGAAAPTTLHTSNTRCKASSVVRAYSDFVIRGLGLQGAARYAAPDGDPKDVVVTFLARRSS 524
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A7S2MDM3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDM3_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.770e-71 Identity = 111/210 (52.86%), Postives = 150/210 (71.43%), Query Frame = 1
Query: 4 YKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPV--DQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKKVVVTWMARRSS 627
YKN++H +AY+ R+G ++G C + W+++ FPGWN DW + +F+ V D L+CD W D P L++QRDTFAN FH+SEDFVN F+A+++L+ D+Q++L DLYP GPFW +W KVF RP LTAWD+ +YG KVC+R+L +GI G A+P T+A TPC HT LVRAY+D+V+RGL+L V A SK V VTWMARR+S
Sbjct: 256 YKNTKHMDEAYIHYRKGTLQGNCDLDSSKWKKEHFPGWNNDWRS-AFESVADDNLQCDVWEDQPTLLLQRDTFANFFHNSEDFVNTFIALAVLKWSKKDLQLILADLYPMGPFWDLWGKVFKGLRPPLTAWDLKEKYGGKKVCYRNLAIGILGAASPVTVASWQTPCKHTPLVRAYADYVVRGLEL--VQEPALWTSKTVTVTWMARRAS 462
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A8J2WYB3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYB3_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.370e-62 Identity = 106/211 (50.24%), Postives = 144/211 (68.25%), Query Frame = 1
Query: 1 RYKNSQHEKQ-AYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPS-KKVVVTWMARRSS 627
RY +S+H++Q + + +G GTC+ WQ + FPGWN +W FQ VD L+C+ P L+I+RDTFAN FHDSEDFVN +A++IL D+Q+L+TDLYP+GPFWP+WD+VF R LT+WD+ +YG+ VCF + + I G AAP T+A T C +++VRAYSDFVIR L LQ T Y + P+ ++VVVT+MARRSS
Sbjct: 223 RYVDSRHQQQHSKIKYSKGTWAGTCATT-QEWQARFFPGWNVNWY-HGFQSVDDLQCEVRESAPTLIIERDTFANFFHDSEDFVNTLIALAILEWNVKDLQILITDLYPKGPFWPIWDRVFFGSRKPLTSWDIKQKYGTKNVCFDNAAIAILGAAAPITVASFNTKCARSSIVRAYSDFVIRALGLQLRTRYHTKPNPQRVVVTFMARRSS 431
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A6U0UU50_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UU50_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.460e-62 Identity = 104/217 (47.93%), Postives = 138/217 (63.59%), Query Frame = 1
Query: 4 YKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVD------QLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPS---KKVVVTWMARRSS 627
YK+S+H Q YV + G +RG C+ W++ FPGWN + + F+ D +CD +++HPV+ IQRDTFAN FHDSEDF N FLA+ IL+ G+ Q L DLYP GPFW WD +FG + +TAWDV ++GS +VCF +GIFGPAA T+ TPC H++LVR YSD IRGL+L + P + KKVV+T+MARR+S
Sbjct: 298 YKSSKHHTQPYVPWQSGFIRGNCAKDALKWKKSSFPGWNYEMVHRGFEESDVRVAPDSSDCDVFIEHPVVFIQRDTFANFFHDSEDFFNLFLALHILKWSIGETQAFLLDLYPEGPFWTAWDVIFGRAKKPMTAWDVHEQFGSKRVCFAKAAMGIFGPAATITLCAKDTPCSHSSLVRQYSDVFIRGLELHDLALRKVPEAADPKKVVLTFMARRTS 514
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: L1JIK9_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JIK9_GUITC) HSP 1 Score: 154 bits (390), Expect = 8.700e-40 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 160 LECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTL-TAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKK-VVVTWMARRSSVQ 633
L+CD W + +V+QRDTFAN FHDSEDF N FLA++IL D Q+ DLYPRGPF+ +W F + AWDV +Y K+CF L GI GPA+P T+ VT C + LV AY+D++IRGL + T+Y P +K +++TWM+R+SSV+
Sbjct: 534 LQCDEWEETATIVLQRDTFANFFHDSEDFFNLFLALAILDLGLSDFQLFFLDLYPRGPFFDIWTNAFAKSPDRVFRAWDVKNKYKGSKICFSRLITGIVGPASPLTIHTSVTKCARSPLVIAYADWMIRGLKVHHKTTYVYPGERKYLLITWMSRKSSVK 693
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A7S3HHE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHE9_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.480e-38 Identity = 63/127 (49.61%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 16 QHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQ--LE-------CDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVG 369
+H KQ Y+ +G + G C P W+ PGWN D T +FQ + LE C+ WV HPVLV QRDTFAN FHDSEDF N F+AM++L PG VQ+ LTDLYP+GPFW +W K + G
Sbjct: 1 RHAKQPYIKFPKGFIEGDCDPVPTLWKPNYMPGWNVDLTVDAFQSTSKQALESADTAAVCEEWVSHPVLVTQRDTFANFFHDSEDFFNVFIAMAVLDYSPGQVQMYLTDLYPKGPFWDIWSKAYSQG 127
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A482SKD0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKD0_9ARCH) HSP 1 Score: 132 bits (333), Expect = 1.050e-34 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 1 RYKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQ--PVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFW 339
+Y N++H KQ Y+ RG + G C P G W+ + PGWNADWT ++ P +CD W++HPV + QRDTFAN FHDSEDFVN FLAM+IL+ G+ Q LTDLYP+G FW
Sbjct: 139 KYVNTRHAKQPYLPFPRGFITGDCEP-GQMWKVEYMPGWNADWTVGAYTSAPDTPPKCDVWIEHPVHITQRDTFANFFHDSEDFVNVFLAMAILKYSRGNTQHYLTDLYPQGSFW 252
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A7S0NDF9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NDF9_9CRYP) HSP 1 Score: 119 bits (297), Expect = 4.320e-31 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 175 WVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTM 477
W + L +QRDTFAN++HDSEDF N FLAMSIL+ VQV+L+DLYP GPF MW KVFG TAW++ +Y +VCF+ +GI+GPA+P T+
Sbjct: 1 WEETTTLFVQRDTFANMYHDSEDFFNVFLAMSILQLSLDQVQVVLSDLYPWGPFSSMWKKVFGFSNRPFTAWELREKYEGKRVCFKKAIIGIYGPASPLTI 101 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13342.2507.1 >prot_E-fasciculatus_F_contig13342.2507.1 ID=prot_E-fasciculatus_F_contig13342.2507.1|Name=mRNA_E-fasciculatus_F_contig13342.2507.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=214bp RYKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPback to top mRNA from alignment at E-fasciculatus_F_contig13342:480..3548+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13342.2507.1 ID=mRNA_E-fasciculatus_F_contig13342.2507.1|Name=mRNA_E-fasciculatus_F_contig13342.2507.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3069bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13342:480..3548+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13342:480..3548+ >mRNA_E-fasciculatus_F_contig13342.2507.1 ID=mRNA_E-fasciculatus_F_contig13342.2507.1|Name=mRNA_E-fasciculatus_F_contig13342.2507.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1284bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13342:480..3548+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |