mRNA_E-fasciculatus_F_contig13342.2507.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13342.2507.1
Unique NamemRNA_E-fasciculatus_F_contig13342.2507.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: D8LR02_ECTSI (Beta-(1,2)-xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR02_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 2.470e-146
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 1
Query:    4 YKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKKVVVTWMARRSSVQ 633
            YKNSQHEKQAYVGLRRGAVRGTCSP+GASWQEK FPGWNADWTTKSFQPVDQLECDGWVDHPV+VIQRDTFANLFHDSEDFVNAFLAMSILRKRP DVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAW+VGLEYG  KVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQG+TSYASPPSKKVVVTWMARRSSVQ
Sbjct:  248 YKNSQHEKQAYVGLRRGAVRGTCSPKGASWQEKFFPGWNADWTTKSFQPVDQLECDGWVDHPVMVIQRDTFANLFHDSEDFVNAFLAMSILRKRPRDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWEVGLEYGELKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGMTSYASPPSKKVVVTWMARRSSVQ 457          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A6H5JCY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY8_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 3.070e-118
Identity = 170/193 (88.08%), Postives = 173/193 (89.64%), Query Frame = 1
Query:  112 GWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIR-------------------GLDLQGVTSYASPPSKKVVVTWMARRSSVQ 633
            GWNADWTTKSFQPVDQLECDGWVDHPV+VIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGR TLTAWDVGLEYG+GKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIR                   GLDLQG+TSYASPPSKKVVVTWMARRSSVQ
Sbjct:    3 GWNADWTTKSFQPVDQLECDGWVDHPVMVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRSTLTAWDVGLEYGTGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRLVFCSNNNLVFVSKTVRGRGLDLQGMTSYASPPSKKVVVTWMARRSSVQ 195          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: F0YEW7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW7_AURAN)

HSP 1 Score: 241 bits (614), Expect = 2.960e-72
Identity = 119/212 (56.13%), Postives = 148/212 (69.81%), Query Frame = 1
Query:    1 RYKNSQH-EKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPS--KKVVVTWMARRSS 627
            RY  ++H E +A+V  R GA+   C      WQ K FPGWNA W   +F  VD LECD W D P LV++RDTFANLFHDSEDFVNAF+A+++LR    D+Q+LLTD+YP GPFW MW +VF   RP LTAW +G +YG+  VCF+ + +GI G AAPTT+    T C  +++VRAYSDFVIRGL LQG   YA+P    K VVVT++ARRSS
Sbjct:  314 RYVAARHAEWEAHVSYREGALAADCDADPELWQAKHFPGWNAHWAD-AFARVDDLECDVWEDAPTLVVERDTFANLFHDSEDFVNAFIALAVLRWSTADLQILLTDIYPEGPFWDMWSRVFRGTRPPLTAWQIGQKYGAKNVCFKKVAIGILGAAAPTTLHTSNTRCKASSVVRAYSDFVIRGLGLQGAARYAAPDGDPKDVVVTFLARRSS 524          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A7S2MDM3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDM3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 4.770e-71
Identity = 111/210 (52.86%), Postives = 150/210 (71.43%), Query Frame = 1
Query:    4 YKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPV--DQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKKVVVTWMARRSS 627
            YKN++H  +AY+  R+G ++G C    + W+++ FPGWN DW + +F+ V  D L+CD W D P L++QRDTFAN FH+SEDFVN F+A+++L+    D+Q++L DLYP GPFW +W KVF   RP LTAWD+  +YG  KVC+R+L +GI G A+P T+A   TPC HT LVRAY+D+V+RGL+L  V   A   SK V VTWMARR+S
Sbjct:  256 YKNTKHMDEAYIHYRKGTLQGNCDLDSSKWKKEHFPGWNNDWRS-AFESVADDNLQCDVWEDQPTLLLQRDTFANFFHNSEDFVNTFIALAVLKWSKKDLQLILADLYPMGPFWDLWGKVFKGLRPPLTAWDLKEKYGGKKVCYRNLAIGILGAASPVTVASWQTPCKHTPLVRAYADYVVRGLEL--VQEPALWTSKTVTVTWMARRAS 462          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A8J2WYB3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYB3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.370e-62
Identity = 106/211 (50.24%), Postives = 144/211 (68.25%), Query Frame = 1
Query:    1 RYKNSQHEKQ-AYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPS-KKVVVTWMARRSS 627
            RY +S+H++Q + +   +G   GTC+     WQ + FPGWN +W    FQ VD L+C+     P L+I+RDTFAN FHDSEDFVN  +A++IL     D+Q+L+TDLYP+GPFWP+WD+VF   R  LT+WD+  +YG+  VCF +  + I G AAP T+A   T C  +++VRAYSDFVIR L LQ  T Y + P+ ++VVVT+MARRSS
Sbjct:  223 RYVDSRHQQQHSKIKYSKGTWAGTCATT-QEWQARFFPGWNVNWY-HGFQSVDDLQCEVRESAPTLIIERDTFANFFHDSEDFVNTLIALAILEWNVKDLQILITDLYPKGPFWPIWDRVFFGSRKPLTSWDIKQKYGTKNVCFDNAAIAILGAAAPITVASFNTKCARSSIVRAYSDFVIRALGLQLRTRYHTKPNPQRVVVTFMARRSS 431          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A6U0UU50_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UU50_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.460e-62
Identity = 104/217 (47.93%), Postives = 138/217 (63.59%), Query Frame = 1
Query:    4 YKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVD------QLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPS---KKVVVTWMARRSS 627
            YK+S+H  Q YV  + G +RG C+     W++  FPGWN +   + F+  D        +CD +++HPV+ IQRDTFAN FHDSEDF N FLA+ IL+   G+ Q  L DLYP GPFW  WD +FG  +  +TAWDV  ++GS +VCF    +GIFGPAA  T+    TPC H++LVR YSD  IRGL+L  +     P +   KKVV+T+MARR+S
Sbjct:  298 YKSSKHHTQPYVPWQSGFIRGNCAKDALKWKKSSFPGWNYEMVHRGFEESDVRVAPDSSDCDVFIEHPVVFIQRDTFANFFHDSEDFFNLFLALHILKWSIGETQAFLLDLYPEGPFWTAWDVIFGRAKKPMTAWDVHEQFGSKRVCFAKAAMGIFGPAATITLCAKDTPCSHSSLVRQYSDVFIRGLELHDLALRKVPEAADPKKVVLTFMARRTS 514          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: L1JIK9_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JIK9_GUITC)

HSP 1 Score: 154 bits (390), Expect = 8.700e-40
Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query:  160 LECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTL-TAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKK-VVVTWMARRSSVQ 633
            L+CD W +   +V+QRDTFAN FHDSEDF N FLA++IL     D Q+   DLYPRGPF+ +W   F      +  AWDV  +Y   K+CF  L  GI GPA+P T+   VT C  + LV AY+D++IRGL +   T+Y  P  +K +++TWM+R+SSV+
Sbjct:  534 LQCDEWEETATIVLQRDTFANFFHDSEDFFNLFLALAILDLGLSDFQLFFLDLYPRGPFFDIWTNAFAKSPDRVFRAWDVKNKYKGSKICFSRLITGIVGPASPLTIHTSVTKCARSPLVIAYADWMIRGLKVHHKTTYVYPGERKYLLITWMSRKSSVK 693          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A7S3HHE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHE9_9STRA)

HSP 1 Score: 137 bits (346), Expect = 4.480e-38
Identity = 63/127 (49.61%), Postives = 78/127 (61.42%), Query Frame = 1
Query:   16 QHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQPVDQ--LE-------CDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVG 369
            +H KQ Y+   +G + G C P    W+    PGWN D T  +FQ   +  LE       C+ WV HPVLV QRDTFAN FHDSEDF N F+AM++L   PG VQ+ LTDLYP+GPFW +W K +  G
Sbjct:    1 RHAKQPYIKFPKGFIEGDCDPVPTLWKPNYMPGWNVDLTVDAFQSTSKQALESADTAAVCEEWVSHPVLVTQRDTFANFFHDSEDFFNVFIAMAVLDYSPGQVQMYLTDLYPKGPFWDIWSKAYSQG 127          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A482SKD0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKD0_9ARCH)

HSP 1 Score: 132 bits (333), Expect = 1.050e-34
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 1
Query:    1 RYKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQ--PVDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFW 339
            +Y N++H KQ Y+   RG + G C P G  W+ +  PGWNADWT  ++   P    +CD W++HPV + QRDTFAN FHDSEDFVN FLAM+IL+   G+ Q  LTDLYP+G FW
Sbjct:  139 KYVNTRHAKQPYLPFPRGFITGDCEP-GQMWKVEYMPGWNADWTVGAYTSAPDTPPKCDVWIEHPVHITQRDTFANFFHDSEDFVNVFLAMAILKYSRGNTQHYLTDLYPQGSFW 252          
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Match: A0A7S0NDF9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NDF9_9CRYP)

HSP 1 Score: 119 bits (297), Expect = 4.320e-31
Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 1
Query:  175 WVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGIFGPAAPTTM 477
            W +   L +QRDTFAN++HDSEDF N FLAMSIL+     VQV+L+DLYP GPF  MW KVFG      TAW++  +Y   +VCF+   +GI+GPA+P T+
Sbjct:    1 WEETTTLFVQRDTFANMYHDSEDFFNVFLAMSILQLSLDQVQVVLSDLYPWGPFSSMWKKVFGFSNRPFTAWELREKYEGKRVCFKKAIIGIYGPASPLTI 101          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13342.2507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LR02_ECTSI2.470e-14696.19Beta-(1,2)-xylosyltransferase n=1 Tax=Ectocarpus s... [more]
A0A6H5JCY8_9PHAE3.070e-11888.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YEW7_AURAN2.960e-7256.13Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2MDM3_9STRA4.770e-7152.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2WYB3_9STRA1.370e-6250.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U0UU50_9STRA1.460e-6247.93Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
L1JIK9_GUITC8.700e-4047.50Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S3HHE9_9STRA4.480e-3849.61Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482SKD0_9ARCH1.050e-3453.04Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S0NDF9_9CRYP4.320e-3153.47Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13342contigE-fasciculatus_F_contig13342:480..3548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.0
Seed ortholog evalue8.4e-119
Seed eggNOG ortholog2880.D8LR02
KEGG rclassRC00005,RC00059
KEGG koko:K18134
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,map00514
EggNOG free text desc.EGF domain-specific O-linked N-acetylglucosamine
EggNOG OGsKOG4698@1,KOG4698@2759
EC2.4.1.255
COG Functional cat.Z
CAZyGT41
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBeta-(1,2)-xylosyltransferase
Ec32 orthologEc-07_002290.1
Exons6
Model size642
Cds size642
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13342.2507.1prot_E-fasciculatus_F_contig13342.2507.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13342 480..3548 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927835.8807423-CDS-E-fasciculatus_F_contig13342:479..5911622927835.8807423-CDS-E-fasciculatus_F_contig13342:479..591Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 480..591 +
1695995715.9187577-CDS-E-fasciculatus_F_contig13342:479..5911695995715.9187577-CDS-E-fasciculatus_F_contig13342:479..591Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 480..591 +
1622927835.8996165-CDS-E-fasciculatus_F_contig13342:827..9101622927835.8996165-CDS-E-fasciculatus_F_contig13342:827..910Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 828..910 +
1695995715.9366663-CDS-E-fasciculatus_F_contig13342:827..9101695995715.9366663-CDS-E-fasciculatus_F_contig13342:827..910Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 828..910 +
1622927835.9136612-CDS-E-fasciculatus_F_contig13342:1410..15531622927835.9136612-CDS-E-fasciculatus_F_contig13342:1410..1553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 1411..1553 +
1695995715.949653-CDS-E-fasciculatus_F_contig13342:1410..15531695995715.949653-CDS-E-fasciculatus_F_contig13342:1410..1553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 1411..1553 +
1622927835.9286337-CDS-E-fasciculatus_F_contig13342:2127..22091622927835.9286337-CDS-E-fasciculatus_F_contig13342:2127..2209Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 2128..2209 +
1695995715.9578867-CDS-E-fasciculatus_F_contig13342:2127..22091695995715.9578867-CDS-E-fasciculatus_F_contig13342:2127..2209Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 2128..2209 +
1622927835.94468-CDS-E-fasciculatus_F_contig13342:2965..30871622927835.94468-CDS-E-fasciculatus_F_contig13342:2965..3087Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 2966..3087 +
1695995715.9661055-CDS-E-fasciculatus_F_contig13342:2965..30871695995715.9661055-CDS-E-fasciculatus_F_contig13342:2965..3087Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 2966..3087 +
1622927835.960833-CDS-E-fasciculatus_F_contig13342:3448..35481622927835.960833-CDS-E-fasciculatus_F_contig13342:3448..3548Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 3449..3548 +
1695995715.9743998-CDS-E-fasciculatus_F_contig13342:3448..35481695995715.9743998-CDS-E-fasciculatus_F_contig13342:3448..3548Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13342 3449..3548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13342.2507.1

>prot_E-fasciculatus_F_contig13342.2507.1 ID=prot_E-fasciculatus_F_contig13342.2507.1|Name=mRNA_E-fasciculatus_F_contig13342.2507.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=214bp
RYKNSQHEKQAYVGLRRGAVRGTCSPRGASWQEKLFPGWNADWTTKSFQP
VDQLECDGWVDHPVLVIQRDTFANLFHDSEDFVNAFLAMSILRKRPGDVQ
VLLTDLYPRGPFWPMWDKVFGVGRPTLTAWDVGLEYGSGKVCFRDLTVGI
FGPAAPTTMARMVTPCFHTALVRAYSDFVIRGLDLQGVTSYASPPSKKVV
VTWMARRSSVQVC*
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mRNA from alignment at E-fasciculatus_F_contig13342:480..3548+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13342.2507.1 ID=mRNA_E-fasciculatus_F_contig13342.2507.1|Name=mRNA_E-fasciculatus_F_contig13342.2507.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3069bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13342:480..3548+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTACAAGAATTCGCAGCACGAGAAGCAAGCCTACGTGGGGCTCCGGCG GGGCGCCGTGAGGGGTACCTGCTCCCCAAGGGGGGCCAGCTGGCAAGAGA AGTTATTTCCTGGTGAGTTGGGAGAGCCAATCTGACCCCCGAGTGAAATT GCTGTGGTGAAATGGAAGTGTTTCCGCGTGTGTTGGGTTGGTGGACCGGA GCTACATATGGTTGTTTGGTACTTGCTGGCGCGGTTTTTGAGAGGGAGTT GAAGTTGGCACTCGTGGGTGACCTGGGTGATACGTCCGGTTTCCACATTT TTTCACCCACCCCCCACCCCTCTGGCATGTTCGGTTTTTTCGCTTCAGGA TGGAACGCAGACTGGACGACGAAGAGTTTCCAACCCGTGGACCAGTTGGA GTGTGATGGCTGGGTTGATCATCCCGTCCTGGTAACGCGCCACTTTTTAA ACCCATACCGTGCAGAGGATTTTGAGCCAGTAGGGTGTCGCCTGTCGTCG GAGCGGTGGCAGCAGCAGAAGCCAACAGAATGTCGCCGTTCATCTGGCAG GAACGCATTAGCAGCAGCAGCAGCAGCAACAGCATCTCAGAAGCCGCCTG TTTACCCACCAGCTCCGTGCTTGAACAGAACCACGGGTGTTTGGCGAGCA TGCACCAACCCGTGCCTCATAGTATGCCCCGAGCGATTTCCATGGAAACG GACTTGTACCAGAAACCTGAGCCGTTCCCGGGGAGCTGGTGGTGCACGCG ATGCTCTCGCCCAGCTTTGCGGCAACATGTTTTTTCATGAAGCAGAAGTC CGTTAAACCTTGTCGACCCCTCCGTTTCATAGTTTTTAAAATCTCGAACA CCCGAAATTACCTTTCTATGTTGCTTATCTTTATTGGCGGCTACGTGGGT TCTTGTGTGTGGGGGGGTGCCCTACCTACAGGTGATTCAGCGGGACACCT TTGCGAATCTGTTCCACGACTCGGAAGACTTCGTCAACGCCTTCCTGGCG ATGTCTATCCTCAGAAAACGCCCGGGGGATGTGCAGGTGCTGCTCACCGA CCTGTACCCGCGAGGGCCGTTCTGGTAAGAGAAAGGGAGAGAGGGGGCAT AGGAATCTCAACTATCTTGAGTGAATGTTGTTGCTTTTAGGTGTGGGGCT GTTTGCGAGGGAGGAGGTTGGACAGGAAACATCTGTCTTGAGGTGCTTTT GTGTGTGTTTTTTGGCGTGTGGACTCCTACCTTTGGCGTTAAGCTTCATG GTGTTTTTGGTCATGATGTGTTGTACCTGCTCTGAAAAAGCCTAACCACA CTCCCTCCTGGTTTTGGCAACTCCTTCCGGTGGAGACCCCGCGGCTCAGA GTAGCATGCCTGCCGTGTGAACTCATGTACCACGCCGCAAGTATGTTTCG CTGATGGTTTCCGCATCTCTCTCTCTGTTGCCCGGCATCGAAACCGATCT CTTGCCGGTGTGGAATGCTGCCTACACGGAACGCTCGGAAACACGGGACG GCGGGAAAACATCCATCCCGAAACGCCCCGGAAACCCTCAATACGGCGGA TGTTTCCCAAAAACTAACTTCGGAATGAACACACGTATCCAATGGCGGTA TGCTCTGCTGAACCGCCACGCGGGGCGGTGTATGTTGGCTTGCGCCAGGC CCATGTGGGACAAGGTGTTCGGAGTGGGACGCCCGACGCTGACGGCATGG GACGTGGGGCTTGAGTATGGCTCAGGGAAGGTATGTAGGTATGATTTATA TATTTTTTCTTTTTGTTATGGTTGTTCGGCCGTCTCAGGGTACGTTCACA ACCACAGTTGACGTGTTGGCGGTTGTCGCCGGCTATGCCGATAGGCGGTG CCCTTGGGACGTATTTTTTGTGGGGCGTTGTTGCCTCGTGAAGCCGCACT ATCTGTAAGTCACGGAACATCGGGCTGAATACGTCGCAAGAGGCGTGAGG TCTTTGGGGGTCATGGTATGCCATCGATAACGGAGATTTGACTCCTAATG TGTCTGGAGGGAAGACCTTGTACCTTGGATTGGTAGCATCGTACAAGGTA ACTTGCTTTTTTTCAATTTTGCCCTCGAGTAGGTTGAGGGTTGTTTCTTT TTAAAGCCTTCAAGGCGTTTTTGACACCCGCTTTCTCGCTCCGCTCAACG TGCCGGCGACTGATTTGGGGTTCCCATGGTACGGCCTTACGCCGTGGCGT GTGTCTTGTGTGCTACATAGGCGCGCGTGGTGTCGTCTTCACCGCAGGAA ATGGACCATCGCGCGCTCGGTTTTGTTTGAAGCTTGGATATTTAGCCACC GTCATTGTTGACCTGTCACCTCTTGGGAGGACATCTTCTCTGCTTGGCTA TCGGGACTGACCGCCTTTTTGCGTACCACGCCGTTGTCCTTCAAACGTGT TGTTTTGCCGCACGCTGCTGTCGGGCGACACTTAACCATCACCCCTCACC CGCCGCCGCCAACTCGATTTTATCGAAACCCCGAAGGTGTGCTTTAGGGA CCTTACCGTAGGGATCTTTGGCCCCGCCGCTCCGACGACGATGGCCAGGA TGGTGACCCCCTGCTTCCACACGGCGCTCGTCAGGGCTTACTCGGACTTC GTCATCAGGTTTGTTTGTAGTTGTTGTTGTTTTTTTACTTTCTGCTTTAG GCAGAAAAATTTTCTTTTTTTTGTTTGGTCCTGCTTAGAGGTCCTTCACG GCGTGGGTTTTCCTCAGATCTCTGTCTCGCTGCCTGTCTGTCAGTCTGTC TCTCTCTCGCTCTGGTGGGAAAATGTTTTCAAGCTCTCGGGGGTGACCAT TCGTTACACTTTGGACGGGTGGTGATGGTGTTTTTTCTTGGTGTGTGTTT GTGCTGCCCCCCCGAGTCTGGGAAATATAGCGTCTATCCGCTGATATGGA ATGATCGGATGGTCCAAGCGCACAGCCAGCAAGAATTTCGTCGTTACTCC TAAAATCGTTTCACGGCAGAGGCCTCGATCTCCAGGGGGTGACGAGCTAC GCGTCCCCTCCCTCGAAGAAGGTGGTGGTCACGTGGATGGCTCGGAGGTC TTCCGTTCAGGTGTGTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13342:480..3548+

>mRNA_E-fasciculatus_F_contig13342.2507.1 ID=mRNA_E-fasciculatus_F_contig13342.2507.1|Name=mRNA_E-fasciculatus_F_contig13342.2507.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1284bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13342:480..3548+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTACAAGAATTCGCAGCACGAGAAGCAAGCCTACGTGGGGCTCCGGCG
GGGCGCCGTGAGGGGTACCTGCTCCCCAAGGGGGGCCAGCTGGCAAGAGA
AGTTATTTCCTGAGGTACAAGAATTCGCAGCACGAGAAGCAAGCCTACGT
GGGGCTCCGGCGGGGCGCCGTGAGGGGTACCTGCTCCCCAAGGGGGGCCA
GCTGGCAAGAGAAGTTATTTCCTGGATGGAACGCAGACTGGACGACGAAG
AGTTTCCAACCCGTGGACCAGTTGGAGTGTGATGGCTGGGTTGATCATCC
CGTCCTGGATGGAACGCAGACTGGACGACGAAGAGTTTCCAACCCGTGGA
CCAGTTGGAGTGTGATGGCTGGGTTGATCATCCCGTCCTGGTGATTCAGC
GGGACACCTTTGCGAATCTGTTCCACGACTCGGAAGACTTCGTCAACGCC
TTCCTGGCGATGTCTATCCTCAGAAAACGCCCGGGGGATGTGCAGGTGCT
GCTCACCGACCTGTACCCGCGAGGGCCGTTCTGGTGATTCAGCGGGACAC
CTTTGCGAATCTGTTCCACGACTCGGAAGACTTCGTCAACGCCTTCCTGG
CGATGTCTATCCTCAGAAAACGCCCGGGGGATGTGCAGGTGCTGCTCACC
GACCTGTACCCGCGAGGGCCGTTCTGGCCCATGTGGGACAAGGTGTTCGG
AGTGGGACGCCCGACGCTGACGGCATGGGACGTGGGGCTTGAGTATGGCT
CAGGGAAGGCCCATGTGGGACAAGGTGTTCGGAGTGGGACGCCCGACGCT
GACGGCATGGGACGTGGGGCTTGAGTATGGCTCAGGGAAGGTGTGCTTTA
GGGACCTTACCGTAGGGATCTTTGGCCCCGCCGCTCCGACGACGATGGCC
AGGATGGTGACCCCCTGCTTCCACACGGCGCTCGTCAGGGCTTACTCGGA
CTTCGTCATCAGGTGTGCTTTAGGGACCTTACCGTAGGGATCTTTGGCCC
CGCCGCTCCGACGACGATGGCCAGGATGGTGACCCCCTGCTTCCACACGG
CGCTCGTCAGGGCTTACTCGGACTTCGTCATCAGAGGCCTCGATCTCCAG
GGGGTGACGAGCTACGCGTCCCCTCCCTCGAAGAAGGTGGTGGTCACGTG
GATGGCTCGGAGGTCTTCCGTTCAGGTGTGTTGAAGGCCTCGATCTCCAG
GGGGTGACGAGCTACGCGTCCCCTCCCTCGAAGAAGGTGGTGGTCACGTG
GATGGCTCGGAGGTCTTCCGTTCAGGTGTGTTGA
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