mRNA_E-fasciculatus_F_contig13335.2504.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 382 bits (981), Expect = 1.690e-121 Identity = 348/483 (72.05%), Postives = 369/483 (76.40%), Query Frame = 3
Query: 195 MPGYEERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDDVATMKVLLTSGADPNCG------HLLHFAACKNKAAAIPVFIEAGVDVEGRTSRGRTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVASMVIRRIAEATEARRPRFELVSKLLARAPQDRAWCRRGFLVLCRAHPDRVRLAVEIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRRGARAGIEVVREGTGGGFDGVSAWMMGLAEEGVFRKIVGFL 1625
MPGYEERASILQDLGDTIFKLVCDRATP+QWAEWLRAPLEHAAGTGNRDLVDKLL +GAN GAGWRGCHGKTLLHAAAEGGNVHV+T L AGAG D+ AK+LDTG TPLDLAV GGK AA+ALIMAG DVN LDATNDG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R D V T+KVLL+ GADP+ LLH AA +N+AAAIP EAGV++EGRTS GRTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TV S V++ +AE++EARRP FE +SKLLARAPQDRAW RRGFLVLCRAHPDRVRLAV+IP XXXXXXXXXXXXXXXXXXXXXXXXX GARA IE REGT GFDG SAWMM L EE +FRKIVGFL
Sbjct: 1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEATEGLQERPRXXXXXXXXXXXXXXXXXXXXXXXXX-XXSGARARIEAAREGTVCGFDGFSAWMMALTEENLFRKIVGFL 482
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 237 bits (605), Expect = 2.450e-68 Identity = 118/144 (81.94%), Postives = 127/144 (88.19%), Query Frame = 3
Query: 186 TSTMPGYEERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATNDG 617
+S +PGYEER+SILQDLGDT FKLV DRATP QWAEWLRAPLEHAA TGNRDLVDKLL +GANGGAGWRGCHGKTLLHAAAEGGNV V+TRL AGAG D+ AK LDTG TPLDLAV GGK AA+ALIMAG +VN+LDATNDG
Sbjct: 40 SSIIPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDG 183
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.480e-59 Identity = 225/357 (63.03%), Postives = 234/357 (65.55%), Query Frame = 3
Query: 327 TGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDDVATMKVLLTSGADPNC-----GHLLHFAACKN---KAAAIPVFIEAGVDVEGRTSRGRTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVASMVIRRIAEATEARRPRFELVSKLLARAPQDRAWCRRGFLVLCRAHPDRVRLAVEIP 1373
TGNRDLVDKLL +GANGGAGWRGC GKTLLHAAAEGGNV V+ RL AGAGGD+ AKTLDTG TPLDLAV GGK AAEALIMAG DVNVLD+ NDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G D NC G LH A ++ + AAI EAG D+EG RGRTP XXXXXXXXXXXXXXXXXXXXXX TV SMVIRRIAEA E R P E VSKLLARAPQDRAW RRGFLVLCRAH DRVRLAVEIP
Sbjct: 48 TGNRDLVDKLLGAGANGGAGWRGCDGKTLLHAAAEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------VEKGIDLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXCACFFCHHDAADLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIP 371
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE) HSP 1 Score: 211 bits (537), Expect = 9.300e-58 Identity = 188/461 (40.78%), Postives = 203/461 (44.03%), Query Frame = 3
Query: 270 ATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDDVATMKVLLTSGADPNCGHLLHFAACKNKAAAIPVFIEAGVDVEGRTSRGRTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVASMVIRRIAEATEARRPRFELVSKLLARAPQDRAWCRRGFLVLCRAHPDRVRLAVEIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRRG---------ARAGIEVVREGTGGGFDGVSAWMMGLAEEGVFRKIVGFL 1625
ATP+QWAEWLRAPLEHAAGTGNRDLVDKLL +G L AGAGGD+ AKTLDTG TPLDLAV GG AAEALIMAG D+NVLD NDG RE+ V+T+KVLL GADPN +LL D+E RTSR TP S+VIR +AE A PR E VS+LL APQDRAW RRGF+VL RA P+RVRLAVEIP XXXXXXXXXXXXXXXXXX GT RG ARAGIEVVREGT GGFDGVSAWM LAEE VFR+IVGFL
Sbjct: 12 ATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAG------------------------------LRRAGAGGDMKAKTLDTGHTPLDLAVVGGNEAAAEALIMAGADMNVLDVKNDGLLHLTITGGHAGSNGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIERRTPLYVAV----------------RENHVSTVKVLLAEGADPNSLNLLLMXXXXXXXXXXXXXXXXXXDIERRTSRESTPLHATAAFGSCAAMLTLLQLGANVNSKENRGKPRPKGK---------------------------AAISVVIRCMAETRAASLPRLEHVSELLVPAPQDRAWRRRGFVVLRRALPNRVRLAVEIPARAAEATEQPQQXXXXXXXXXXXXXXXXXX----------GTHRGGGRAGEXXXARAGIEVVREGTVGGFDGVSAWMTALAEEEVFRRIVGFL 389
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.450e-54 Identity = 167/487 (34.29%), Postives = 188/487 (38.60%), Query Frame = 3
Query: 195 MPGYEERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDDVATMKVLLTSGADPNCGH----------LLHFAACKNKAAAIPVFIEAGVDVEGRTSRGRTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVASMVIRRIAEATEARRPRFELVSKLLARAPQDRAWCRRGFLVLCRAHPDRVRLAVEIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRRGARAGIEVVREGTGGGFDGVSAWMMGLAEEGVFRKIVGFL 1625
MPGY+ER+SILQDLGDTIFKLVCD ATP+QWAEWLRAPLEHAA TG AGGDI AK T TPLDL V GGK AA+ALIMAG D ++ + D+V ++ G D NC + LL AAC+NKAAAI V EAG D+E R + TV MV+++IAEA + RP E +S+LLARAPQDRAW RRGFLVL R HPDRVRLAVEIP X G G RAGIE V EGT GF GVSAWMM L EEGVFR+IVGFL
Sbjct: 1 MPGYKERSSILQDLGDTIFKLVCDWATPEQWAEWLRAPLEHAAATG-----------------------------------------------AGGDIKAKAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMWE----------------------------------------------HRVAKDLLLSGANPIQAGSNGNFPIHLAACHGLDEVVL--AVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARLT--------------------LFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGGGGXT-----GASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.470e-45 Identity = 242/442 (54.75%), Postives = 269/442 (60.86%), Query Frame = 3
Query: 327 TGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDDVATMKVLLTSGADPNCGH--------LLHFAACKNKAAAIPVFIEAGVDVEGRTSRGRTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVASMVIRRIAEATEARRPRFELVSKLLARAPQDRAWCRRGFLVLCRAHPDRVRLAVEIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRRGARAGI-EVVREGTGGGFDGVSAWMMGLAEEGVFRKIVGFL 1625
T N +LV KLL +GA+GG GWRGCH KTLLHAAA+GG+ V++ L AGA D A+ TG TPL LAV GG A+AL MA DVNVLDA N GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+D ++T++VLL GA+ N +LHFAA + A AIPV IEAG V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T S I IAEA + R E +SKLL RAPQDRAW RRGFL LCRAHPDR+RL VEIP +RAGI V +G GGGF+ + W++ LAEE VFRKIVGFL
Sbjct: 21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPPLLRAV---RQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGST-PSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 168 bits (426), Expect = 3.850e-42 Identity = 88/137 (64.23%), Postives = 101/137 (73.72%), Query Frame = 3
Query: 207 EERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLD-TGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATND 614
E+RA L D IFKL+CDRAT +QWAEWLRAPLEHAAGT N+DLV+KLL++GA+G AGWRGC KTLLHAAAEGGN V+T L AGAG D+ AK L G TPL +AVA GK AA L++AG DVN D D
Sbjct: 9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.450e-40 Identity = 82/136 (60.29%), Postives = 96/136 (70.59%), Query Frame = 3
Query: 207 EERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDATND 614
E+R IL D D IFKL+CDRAT +QW EWLRAPLEHAAGT NRDLV+KLL++GA+G AGWRGC TLLHAA V+T L AGAG D+ AKT TG TPL +AV G+ AA L++AG DVN +D D
Sbjct: 9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTD 144
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 158 bits (400), Expect = 6.420e-39 Identity = 80/137 (58.39%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 195 MPGYEERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVHVMTRLSTAGAGGDINAKTLDTGRTPLDLAVAGGKRGAAEALIMAGGDVNVLDA 605
M +++R S L GD I LVCD ATP+QW +WLR PLEHAAGTGN LV+KLL+ GAN AGWRGC G+TL+HA AEGG+ V++ L+ AGAG IN + +G TPL LAV+GGK A + L++AG DVN LDA
Sbjct: 1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDA 137
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.600e-38 Identity = 87/138 (63.04%), Postives = 101/138 (73.19%), Query Frame = 3
Query: 207 EERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLVDKLLESGANGGAGWRGCHGKTLLHAAAEGGNVH-VMTRLSTAGAGGDINAKTLDTGR-TPLDLAVAGGKRGAAEALIMAGGDVNVLDATND 614
E+RA IL D D IF+L+CDRAT +QWAEWLRAPLEHAAGT N+DLV+KLL++GANG AG RGC TLLHAAAEGGN V+T L AGA DI AK + R TPL +AVA GK AA A+++AG DVN D D
Sbjct: 11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13335.2504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13335.2504.1 >prot_E-fasciculatus_F_contig13335.2504.1 ID=prot_E-fasciculatus_F_contig13335.2504.1|Name=mRNA_E-fasciculatus_F_contig13335.2504.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=478bp MPGYEERASILQDLGDTIFKLVCDRATPKQWAEWLRAPLEHAAGTGNRDLback to top mRNA from alignment at E-fasciculatus_F_contig13335:199..3111- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13335.2504.1 ID=mRNA_E-fasciculatus_F_contig13335.2504.1|Name=mRNA_E-fasciculatus_F_contig13335.2504.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2913bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13335:199..3111- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13335:199..3111- >mRNA_E-fasciculatus_F_contig13335.2504.1 ID=mRNA_E-fasciculatus_F_contig13335.2504.1|Name=mRNA_E-fasciculatus_F_contig13335.2504.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2868bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13335:199..3111- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |